Guide to the Human Genome
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Name: LOC100129825 Sequence: fasta or formatted (97aa) NCBI GI: 239755522
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {208aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           14.4         14           1
 D aspartate           1.0          1           1
 E glutamate           0.0          0           0
 F phenylalanine       1.0          1           1
 G glycine             0.0          0           0
 H histidine           2.1          2           1
 I isoleucine         16.5         16           1
 K lysine              0.0          0           0
 L leucine             0.0          0           0
 M methionine         12.4         12           1
 N asparagine          1.0          1           1
 P proline             2.1          2           2
 Q glutamine           0.0          0           0
 R arginine            1.0          1           1
 S serine              2.1          2           1
 T threonine           4.1          4           1
 V valine             14.4         14           1
 W tryptophan          0.0          0           0
 Y tyrosine           27.8         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100129825          0.667   PREDICTED: hypothetical protein 
LOC100133226          0.567   PREDICTED: hypothetical protein 
LOC100134411          0.537   PREDICTED: hypothetical protein 
LOC100293574          0.527   PREDICTED: hypothetical protein, partial 
LOC100133975          0.522   PREDICTED: hypothetical protein, partial 
LOC100134447          0.522   PREDICTED: hypothetical protein 
LOC100134730          0.522   PREDICTED: hypothetical protein 
LOC100133807          0.517   PREDICTED: similar to serine/threonine-protein kina...
LOC100291751          0.498   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100133450          0.498   PREDICTED: hypothetical protein, partial 
LOC100287975          0.498   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100131488          0.493   PREDICTED: hypothetical protein 
LOC100133741          0.488   PREDICTED: hypothetical protein 
LOC100128267          0.483   PREDICTED: hypothetical protein, partial 
LOC100132983          0.473   PREDICTED: hypothetical protein 
LOC100134576          0.473   PREDICTED: hypothetical protein 
LOC100129642          0.468   PREDICTED: hypothetical protein 
LOC100134353          0.463   PREDICTED: hypothetical protein 
LOC100290334          0.463   PREDICTED: hypothetical protein XP_002346856, parti...
LOC100134139          0.458   PREDICTED: hypothetical protein 
LOC100134279          0.458   PREDICTED: hypothetical protein, partial 
LOC100131203          0.458   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.458   PREDICTED: similar to serine/threonine-protein kina...
LOC100288317          0.453   PREDICTED: hypothetical protein XP_002342505 
LOC100131203          0.448   PREDICTED: hypothetical protein 
LOC100132016          0.448   PREDICTED: hypothetical protein 
LOC100129802          0.448   PREDICTED: hypothetical protein 
LOC100293155          0.433   PREDICTED: hypothetical protein 
LOC100134060          0.433   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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