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Search of human proteins with 239752097
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo
sapiens]
(413 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo ... 881 0.0
gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo ... 881 0.0
gi|239757595 PREDICTED: hypothetical protein [Homo sapiens] 495 e-140
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 38 0.019
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 38 0.019
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 33 0.36
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 33 0.36
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 33 0.36
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 33 0.36
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 33 0.36
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 33 0.36
gi|139394599 hypermethylated in cancer 2 [Homo sapiens] 33 0.62
gi|75709198 nephronectin [Homo sapiens] 33 0.62
gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens] 32 0.81
gi|239749949 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|226529917 triosephosphate isomerase 1 isoform 2 [Homo sapiens] 31 1.8
gi|4507645 triosephosphate isomerase 1 isoform 1 [Homo sapiens] 31 1.8
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 31 2.3
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 31 2.3
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 30 3.1
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 30 3.1
gi|38348382 spermatogenesis associated 21 [Homo sapiens] 30 3.1
gi|148833508 notch1 preproprotein [Homo sapiens] 30 4.0
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 30 4.0
gi|194473700 Src homology 3 domain-containing guanine nucleotide... 30 4.0
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 30 4.0
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 30 5.2
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 30 5.2
gi|205360989 hypothetical protein LOC205327 [Homo sapiens] 30 5.2
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 30 5.2
>gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo
sapiens]
Length = 413
Score = 881 bits (2276), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60
MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE
Sbjct: 1 MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60
Query: 61 EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120
EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA
Sbjct: 61 EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120
Query: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180
VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH
Sbjct: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180
Query: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240
LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG
Sbjct: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240
Query: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300
QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT
Sbjct: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300
Query: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360
AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV
Sbjct: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360
Query: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
>gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo
sapiens]
Length = 413
Score = 881 bits (2276), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60
MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE
Sbjct: 1 MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60
Query: 61 EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120
EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA
Sbjct: 61 EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120
Query: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180
VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH
Sbjct: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180
Query: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240
LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG
Sbjct: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240
Query: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300
QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT
Sbjct: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300
Query: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360
AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV
Sbjct: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360
Query: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
>gi|239757595 PREDICTED: hypothetical protein [Homo sapiens]
Length = 612
Score = 495 bits (1274), Expect = e-140
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 188 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 247
GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV
Sbjct: 387 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 446
Query: 248 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 307
GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS
Sbjct: 447 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 506
Query: 308 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 367
DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA
Sbjct: 507 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 566
Query: 368 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 567 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 612
Score = 219 bits (559), Expect = 3e-57
Identities = 108/115 (93%), Positives = 110/115 (95%), Gaps = 2/115 (1%)
Query: 85 QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 144
QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR
Sbjct: 174 QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 233
Query: 145 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG--CEPRQELQL 197
TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG EP + LQ+
Sbjct: 234 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQM 288
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 37.7 bits (86), Expect = 0.019
Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 21/148 (14%)
Query: 99 PTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPART--VCPCPLTVQTV 156
P AP P PG+ P A ++P P P Q V + +PA V PCP
Sbjct: 936 PAAPL-PSPTPGESP---PASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCP------ 985
Query: 157 AAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFC 216
A+S EP LL++ G G P+ C++ A + P
Sbjct: 986 GPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLA--FSGPKL------ 1037
Query: 217 SAQRVGPRPLRPYATLAVEPVHCGQAQR 244
A R+GPRP+ P + V GQAQ+
Sbjct: 1038 -APRLGPRPVPPPRPESTGTVGPGQAQQ 1064
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 37.7 bits (86), Expect = 0.019
Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 21/148 (14%)
Query: 99 PTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPART--VCPCPLTVQTV 156
P AP P PG+ P A ++P P P Q V + +PA V PCP
Sbjct: 1018 PAAPL-PSPTPGESP---PASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCP------ 1067
Query: 157 AAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFC 216
A+S EP LL++ G G P+ C++ A + P
Sbjct: 1068 GPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLA--FSGPKL------ 1119
Query: 217 SAQRVGPRPLRPYATLAVEPVHCGQAQR 244
A R+GPRP+ P + V GQAQ+
Sbjct: 1120 -APRLGPRPVPPPRPESTGTVGPGQAQQ 1146
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 33.5 bits (75), Expect = 0.36
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 13/99 (13%)
Query: 95 AQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
A T P P A P + A +A P V +L P + A + PA P P
Sbjct: 134 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 193
Query: 155 TVA-------------AEATEKASSLGGSPQEPLTLNLH 180
A E+ E+ ++ G QEPL LH
Sbjct: 194 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 232
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 33.5 bits (75), Expect = 0.36
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 13/99 (13%)
Query: 95 AQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
A T P P A P + A +A P V +L P + A + PA P P
Sbjct: 134 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 193
Query: 155 TVA-------------AEATEKASSLGGSPQEPLTLNLH 180
A E+ E+ ++ G QEPL LH
Sbjct: 194 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 232
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 33.5 bits (75), Expect = 0.36
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 13/99 (13%)
Query: 95 AQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
A T P P A P + A +A P V +L P + A + PA P P
Sbjct: 145 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 204
Query: 155 TVA-------------AEATEKASSLGGSPQEPLTLNLH 180
A E+ E+ ++ G QEPL LH
Sbjct: 205 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 243
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 33.5 bits (75), Expect = 0.36
Identities = 32/105 (30%), Positives = 41/105 (39%), Gaps = 21/105 (20%)
Query: 223 PRPLRPYATLAVEPVHCGQAQRATVGLQARHGKHCQ---LKPICALVV---KCAVPLWGG 276
P+P Y T+ + V QR LQ HG + P+CA +C P
Sbjct: 66 PQPTVVYRTVYRQVVKTDHRQR----LQCCHGFYESRGFCVPLCAQECVHGRCVAPNQCQ 121
Query: 277 CVPGRQGLEASASSGNCKSHCFPTAWG--C--PASDSSTPLCSTK 317
CVPG +G +C S C P WG C P S + C K
Sbjct: 122 CVPGWRG-------DDCSSECAPGMWGPQCDKPCSCGNNSSCDPK 159
Score = 32.0 bits (71), Expect = 1.1
Identities = 35/135 (25%), Positives = 46/135 (34%), Gaps = 26/135 (19%)
Query: 90 CAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPS-FVPLLRPEQSVAGWESCTPARTVCP 148
CAQ+ AP VPG ++ P + P S SC P VC
Sbjct: 105 CAQECVHGRCVAPNQCQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCS 164
Query: 149 CPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNP 208
CP +Q +P T + GP C+ R + C C Q
Sbjct: 165 CPSGLQPPNC-------------LQPCTPGYY-----GPACQFRCQ---CHGAPCDPQTG 203
Query: 209 TYRQSCFCSAQRVGP 223
+CFC A+R GP
Sbjct: 204 ----ACFCPAERTGP 214
Score = 29.3 bits (64), Expect = 6.8
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 253 HGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWG--CPAS 307
+G +C + C + C+ P+ G CV ++G + GNC C P WG C AS
Sbjct: 443 YGVNCSARCSCENAIACS-PIDGECVC-KEGWQR----GNCSVPCPPGTWGFSCNAS 493
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 33.5 bits (75), Expect = 0.36
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 99 PTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAA 158
P AP + PG + +A VP+ P+L P + + P + P P + QT+A
Sbjct: 1628 PVPVMAPSSTPGTS--LASASPVPAPTPVLAPSSTQTMLPA--PVPSPLPSPASTQTLAL 1683
Query: 159 EATEKASSLGG-SPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCS 217
A A +LGG SP + L+L Q G P Q L L + PT Q+ +
Sbjct: 1684 -APALAPTLGGSSPSQTLSLGTGNPQ----GPFPTQTLSLTPASSL---VPTPAQTLSLA 1735
Query: 218 AQRVGPRPLRPYATLAVEP 236
GP PL P TL++ P
Sbjct: 1736 P---GP-PLGPTQTLSLAP 1750
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 33.5 bits (75), Expect = 0.36
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 257 CQLKPICALVVKCAVPLWGGCVPGRQGLEASASS-GNCKSHCFPTAWGCPASDSSTPLCS 315
C KP+C V C+ G C + G + SS G C S GC S+ P CS
Sbjct: 40 CCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSSKGGCGS------CGCSQSNCCKPCCS 93
Query: 316 T 316
+
Sbjct: 94 S 94
>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
Length = 615
Score = 32.7 bits (73), Expect = 0.62
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 165 SSLGGSPQEPLTL----NLHLLQLSGPGCEPRQELQLCSRE 201
S LGG+P EP+ L + HL L PG +PR+ L+ +R+
Sbjct: 296 SELGGTPDEPMDLEGAEDNHLSLLEAPGGQPRKSLRHSTRK 336
>gi|75709198 nephronectin [Homo sapiens]
Length = 565
Score = 32.7 bits (73), Expect = 0.62
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 94 KAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTV 153
K T PT P+ P PP + L P +P PE+ G + PA + P +TV
Sbjct: 313 KPTTRPTPKPTPIPTPPPPPPLPTELRTP--LPPTTPERPTTGLTTIAPAASTPPGGITV 370
Query: 154 QTVAAEATEKASSLGGSPQEP 174
+K P++P
Sbjct: 371 DNRVQTDPQKPRGDVFIPRQP 391
>gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens]
Length = 233
Score = 32.3 bits (72), Expect = 0.81
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
Query: 93 DKAQTLPTAPTAPMAVPGQPPYILAAL-----AVPSFVPLLRPEQSVAGWESCTPARTVC 147
D AQ P +P AP VP + P LAA A P VPLL P S A TV
Sbjct: 54 DAAQDSPASPCAPPGVPLRAPGPLAAAVPADKARPPAVPLLLPPAS---------AETVG 104
Query: 148 PCP 150
P P
Sbjct: 105 PAP 107
>gi|239749949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 32.0 bits (71), Expect = 1.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 106 MAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKAS 165
+A+PG P + L +PLL + S+A P TV P V +VA E + +
Sbjct: 113 LALPGWPAFALHTAGAQQSLPLLM-DNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPA 171
Query: 166 SLGGS 170
GG+
Sbjct: 172 VTGGA 176
>gi|226529917 triosephosphate isomerase 1 isoform 2 [Homo sapiens]
Length = 286
Score = 31.2 bits (69), Expect = 1.8
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 4 VWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSEEKV 63
VWA + + H++ W+KS + R +GGSV+ TC + +S+ V
Sbjct: 205 VWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDV 264
Query: 64 RG 65
G
Sbjct: 265 DG 266
>gi|4507645 triosephosphate isomerase 1 isoform 1 [Homo sapiens]
Length = 249
Score = 31.2 bits (69), Expect = 1.8
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 4 VWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSEEKV 63
VWA + + H++ W+KS + R +GGSV+ TC + +S+ V
Sbjct: 168 VWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDV 227
Query: 64 RG 65
G
Sbjct: 228 DG 229
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 30.8 bits (68), Expect = 2.3
Identities = 34/138 (24%), Positives = 49/138 (35%), Gaps = 34/138 (24%)
Query: 129 RPEQSVAGWESCTPARTVCP-------------CPLTVQTVAAEATEKASSLGGSPQEPL 175
RP + A S +PA T CP CP+ + + ++ +L SP++P
Sbjct: 383 RPRPAPARSPSQSPAGTPCPVLSLGARRGVTLPCPVPAEAAPRDFCQRFPALEPSPRQP- 441
Query: 176 TLNLHLLQLSGPGCEPRQELQL-CSREACRWQNPTYR-------QSCFCSAQRVGPRPL- 226
P PR L +AC W P Y + + S++ P PL
Sbjct: 442 -----------PARAPRPSPDLPAPLDACPWAPPVYAPPAAPGPYAAWTSSRPARPAPLS 490
Query: 227 RPYATLAVEPVHCGQAQR 244
P A P G A R
Sbjct: 491 HPTARAFQVPRRPGHAAR 508
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 30.8 bits (68), Expect = 2.3
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 239 CGQAQRATVGLQAR-HGKHCQLKPICALVVKCAVPLWGGCVPGRQGL-EASASSGNCKSH 296
CG + G +R + C KP+C+ V C+ G C + G S G C S
Sbjct: 42 CGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGS- 100
Query: 297 CFPTAWGCPASDSSTPLC 314
C + GC + S C
Sbjct: 101 CGGSKGGCGSCGCSQSSC 118
Score = 29.6 bits (65), Expect = 5.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 275 GGCVPGRQGLEA-----SASSGNCKSHCFPTAWGCPASDSSTPLCS 315
GGC GR G + S+S G C S C+ C S P CS
Sbjct: 29 GGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACS 74
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 30.4 bits (67), Expect = 3.1
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 88 LKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQ-SVAGWESCTPARTV 146
LK P+ P P AVP + P A + P PE+ + A TP V
Sbjct: 504 LKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGV 563
Query: 147 CPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQEL 195
P V + ++ + S SP EP L GP EP +E+
Sbjct: 564 AAAPTLVSGGGSTSSTSSGSFEASPVEP-----QLPSKEGP--EPPEEV 605
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 30.4 bits (67), Expect = 3.1
Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 69 PNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLL 128
P +G + A G+ +L PTA T P+ PP + A+A P VPL
Sbjct: 403 PETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPL-----PPGPVPAVAAPQVVPLS 457
Query: 129 RPEQSVAGWESCTPARTVCPCPLTVQTVA-AEATEKASSLGGSPQEPLTL-------NLH 180
P G +P + T Q V +A L P P+ + N+H
Sbjct: 458 PPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVH 517
Query: 181 LLQLSGPG 188
L+ SG G
Sbjct: 518 LIN-SGVG 524
>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
Length = 469
Score = 30.4 bits (67), Expect = 3.1
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Query: 91 AQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCP 150
AQ +TL PT+ ++P P + A+ + +P PE + G P T PCP
Sbjct: 110 AQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMG----APVPTSMPCP 165
Query: 151 LTV----------QTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSR 200
+ + + +++E+ S + QEP +L L + E ++L L
Sbjct: 166 VLLGPALDLGWRRMELLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSE--EQLTLKQE 223
Query: 201 EACR 204
EA R
Sbjct: 224 EAFR 227
>gi|148833508 notch1 preproprotein [Homo sapiens]
Length = 2555
Score = 30.0 bits (66), Expect = 4.0
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 12/69 (17%)
Query: 186 GPGCEPRQELQLCSRE--------ACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPV 237
GP C RQ++ C ++ C + +YR C C A GP RPY + P
Sbjct: 172 GPTC--RQDVNECGQKPGLCRHGGTCHNEVGSYR--CVCRATHTGPNCERPYVPCSPSPC 227
Query: 238 HCGQAQRAT 246
G R T
Sbjct: 228 QNGGTCRPT 236
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 30.0 bits (66), Expect = 4.0
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 21/129 (16%)
Query: 48 SVSSGTCSQRSSEEKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMA 107
++ +G + +S E K + +PR E D + C D +T P
Sbjct: 1734 AMDAGDSADQSGERKDK----ESPRAGPTEPMDTSEAT---VCHSDLERT-------PPL 1779
Query: 108 VPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSL 167
+PG+P + P+ + L E S++ + TP P P A AT +
Sbjct: 1780 LPGRPARDRGPESRPTELSL--EELSISARQQPTPLTPAQPAP-----APAPATTTGTRA 1832
Query: 168 GGSPQEPLT 176
GG P+EPL+
Sbjct: 1833 GGHPEEPLS 1841
>gi|194473700 Src homology 3 domain-containing guanine nucleotide
exchange factor [Homo sapiens]
Length = 871
Score = 30.0 bits (66), Expect = 4.0
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 99 PTAPTAPMAVPGQPPYILA----ALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
P +P P AVPG P A L P P+LRP ++ CTP LT
Sbjct: 111 PKSPKLPKAVPGGSPKSPANGAVTLPAPPPPPVLRPPRTPNAPAPCTPEE-----DLTGL 165
Query: 155 TVAAEATEKASSLGGSPQEP 174
T + + A+ L + P
Sbjct: 166 TASPVPSPTANGLAANNDSP 185
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 30.0 bits (66), Expect = 4.0
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 257 CQLKPICALVVKCAVPLWGGCVPGRQGL-EASASSGNCKSHCFPTAWGCPASDSSTPLCS 315
C KP+C V C+ G C + G S G C S C + GC + S C
Sbjct: 54 CCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVS-CGGSKGGCGSCGGSKGGCG 112
Query: 316 T 316
+
Sbjct: 113 S 113
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 29.6 bits (65), Expect = 5.2
Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 9/144 (6%)
Query: 98 LPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESC-TPARTVCPCPLTVQTV 156
LP PTA + P Y A+ +PS L P ++ P P + +T+
Sbjct: 817 LPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTI 876
Query: 157 AAEATEKASSLGGSPQEPLTLNLH--LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSC 214
A L +P L++H + QL G P Q+ + P
Sbjct: 877 VPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDV-----PPSPHHT 931
Query: 215 FCSAQRVGPRP-LRPYATLAVEPV 237
+ + P+P L P TL +PV
Sbjct: 932 VQNMRATPPQPALPPQPTLPPQPV 955
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 29.6 bits (65), Expect = 5.2
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 17/88 (19%)
Query: 135 AGWESCTPARTVCPCPLTVQTVAAEATEKASSLG------GSPQEPLTLNLHLLQ----- 183
AGW +RT P P+ T + + A+SLG P PL L + +
Sbjct: 760 AGWAGDAGSRTCSPAPIPPHTSDSCSKSGAASLGEEARDTPQPSSPLVLQVGRPEQGAVG 819
Query: 184 ------LSGPGCEPRQELQLCSREACRW 205
S PG +P QE Q W
Sbjct: 820 PHRSHCCSQPGTQPAQEAQRGPSPEASW 847
>gi|205360989 hypothetical protein LOC205327 [Homo sapiens]
Length = 385
Score = 29.6 bits (65), Expect = 5.2
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 127 LLRPEQSVAGWESCTPARTVCP-------CPLTVQTVAAEATEKASSLGGSPQEPLTLNL 179
LL P+ + SC+ ART+ P C L+ + + + ++ G PQ + L
Sbjct: 14 LLLPQLGIGNASSCSQARTMNPGGSGGARCSLSAEVRRRQCLQLSTVPGADPQR--SNEL 71
Query: 180 HLLQLSGPGCEPRQEL 195
LL +G G E RQ+L
Sbjct: 72 LLLAAAGEGLE-RQDL 86
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 257 CQLKPICALVVKCAVPLWGGCVPGRQGL-EASASSGNCKSHCFPTAWGCPASDSSTPLC 314
C KP+C V C+ G C + G S G C S C + GC + S C
Sbjct: 40 CCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGGSKGGCGS-CGGSKGGCGSCGCSQCSC 97
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,390,109
Number of Sequences: 37866
Number of extensions: 1100866
Number of successful extensions: 3347
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 3313
Number of HSP's gapped (non-prelim): 70
length of query: 413
length of database: 18,247,518
effective HSP length: 105
effective length of query: 308
effective length of database: 14,271,588
effective search space: 4395649104
effective search space used: 4395649104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.