Guide to the Human Genome
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Search of human proteins with 239752097

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo
sapiens]
         (413 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo ...   881   0.0  
gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo ...   881   0.0  
gi|239757595 PREDICTED: hypothetical protein [Homo sapiens]           495   e-140
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       38   0.019
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       38   0.019
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    33   0.36 
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    33   0.36 
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ...    33   0.36 
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s...    33   0.36 
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         33   0.36 
gi|53292629 keratin associated protein 5-11 [Homo sapiens]             33   0.36 
gi|139394599 hypermethylated in cancer 2 [Homo sapiens]                33   0.62 
gi|75709198 nephronectin [Homo sapiens]                                33   0.62 
gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens]                 32   0.81 
gi|239749949 PREDICTED: hypothetical protein [Homo sapiens]            32   1.1  
gi|226529917 triosephosphate isomerase 1 isoform 2 [Homo sapiens]      31   1.8  
gi|4507645 triosephosphate isomerase 1 isoform 1 [Homo sapiens]        31   1.8  
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi...    31   2.3  
gi|51972220 keratin associated protein 5-2 [Homo sapiens]              31   2.3  
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              30   3.1  
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]              30   3.1  
gi|38348382 spermatogenesis associated 21 [Homo sapiens]               30   3.1  
gi|148833508 notch1 preproprotein [Homo sapiens]                       30   4.0  
gi|6912458 calcineurin binding protein 1 [Homo sapiens]                30   4.0  
gi|194473700 Src homology 3 domain-containing guanine nucleotide...    30   4.0  
gi|60593038 keratin associated protein 5-4 [Homo sapiens]              30   4.0  
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       30   5.2  
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              30   5.2  
gi|205360989 hypothetical protein LOC205327 [Homo sapiens]             30   5.2  
gi|60279697 keratin associated protein 5-7 [Homo sapiens]              30   5.2  

>gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo
           sapiens]
          Length = 413

 Score =  881 bits (2276), Expect = 0.0
 Identities = 413/413 (100%), Positives = 413/413 (100%)

Query: 1   MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60
           MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE
Sbjct: 1   MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60

Query: 61  EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120
           EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA
Sbjct: 61  EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120

Query: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180
           VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH
Sbjct: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180

Query: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240
           LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG
Sbjct: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240

Query: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300
           QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT
Sbjct: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300

Query: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360
           AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV
Sbjct: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360

Query: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
           WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413


>gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo
           sapiens]
          Length = 413

 Score =  881 bits (2276), Expect = 0.0
 Identities = 413/413 (100%), Positives = 413/413 (100%)

Query: 1   MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60
           MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE
Sbjct: 1   MWQVWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSE 60

Query: 61  EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120
           EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA
Sbjct: 61  EKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALA 120

Query: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180
           VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH
Sbjct: 121 VPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLH 180

Query: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240
           LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG
Sbjct: 181 LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCG 240

Query: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300
           QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT
Sbjct: 241 QAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPT 300

Query: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360
           AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV
Sbjct: 301 AWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVV 360

Query: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
           WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 361 WLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413


>gi|239757595 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 612

 Score =  495 bits (1274), Expect = e-140
 Identities = 226/226 (100%), Positives = 226/226 (100%)

Query: 188 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 247
           GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV
Sbjct: 387 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 446

Query: 248 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 307
           GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS
Sbjct: 447 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 506

Query: 308 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 367
           DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA
Sbjct: 507 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 566

Query: 368 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
           GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 567 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 612



 Score =  219 bits (559), Expect = 3e-57
 Identities = 108/115 (93%), Positives = 110/115 (95%), Gaps = 2/115 (1%)

Query: 85  QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 144
           QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR
Sbjct: 174 QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 233

Query: 145 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG--CEPRQELQL 197
           TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG   EP + LQ+
Sbjct: 234 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQM 288


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 21/148 (14%)

Query: 99   PTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPART--VCPCPLTVQTV 156
            P AP  P   PG+ P    A ++P   P   P Q V    + +PA    V PCP      
Sbjct: 936  PAAPL-PSPTPGESP---PASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCP------ 985

Query: 157  AAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFC 216
                   A+S      EP      LL++ G G  P+     C++ A  +  P        
Sbjct: 986  GPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLA--FSGPKL------ 1037

Query: 217  SAQRVGPRPLRPYATLAVEPVHCGQAQR 244
             A R+GPRP+ P    +   V  GQAQ+
Sbjct: 1038 -APRLGPRPVPPPRPESTGTVGPGQAQQ 1064


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 21/148 (14%)

Query: 99   PTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPART--VCPCPLTVQTV 156
            P AP  P   PG+ P    A ++P   P   P Q V    + +PA    V PCP      
Sbjct: 1018 PAAPL-PSPTPGESP---PASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCP------ 1067

Query: 157  AAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFC 216
                   A+S      EP      LL++ G G  P+     C++ A  +  P        
Sbjct: 1068 GPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLA--FSGPKL------ 1119

Query: 217  SAQRVGPRPLRPYATLAVEPVHCGQAQR 244
             A R+GPRP+ P    +   V  GQAQ+
Sbjct: 1120 -APRLGPRPVPPPRPESTGTVGPGQAQQ 1146


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 95  AQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
           A T P  P    A    P  + A +A P  V +L P  + A   +  PA    P P    
Sbjct: 134 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 193

Query: 155 TVA-------------AEATEKASSLGGSPQEPLTLNLH 180
             A              E+ E+ ++ G   QEPL   LH
Sbjct: 194 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 232


>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 95  AQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
           A T P  P    A    P  + A +A P  V +L P  + A   +  PA    P P    
Sbjct: 134 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 193

Query: 155 TVA-------------AEATEKASSLGGSPQEPLTLNLH 180
             A              E+ E+ ++ G   QEPL   LH
Sbjct: 194 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 232


>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
           sapiens]
          Length = 316

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 95  AQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
           A T P  P    A    P  + A +A P  V +L P  + A   +  PA    P P    
Sbjct: 145 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAP 204

Query: 155 TVA-------------AEATEKASSLGGSPQEPLTLNLH 180
             A              E+ E+ ++ G   QEPL   LH
Sbjct: 205 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 243


>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
           sapiens]
          Length = 1037

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 32/105 (30%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 223 PRPLRPYATLAVEPVHCGQAQRATVGLQARHGKHCQ---LKPICALVV---KCAVPLWGG 276
           P+P   Y T+  + V     QR    LQ  HG +       P+CA      +C  P    
Sbjct: 66  PQPTVVYRTVYRQVVKTDHRQR----LQCCHGFYESRGFCVPLCAQECVHGRCVAPNQCQ 121

Query: 277 CVPGRQGLEASASSGNCKSHCFPTAWG--C--PASDSSTPLCSTK 317
           CVPG +G        +C S C P  WG  C  P S  +   C  K
Sbjct: 122 CVPGWRG-------DDCSSECAPGMWGPQCDKPCSCGNNSSCDPK 159



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 35/135 (25%), Positives = 46/135 (34%), Gaps = 26/135 (19%)

Query: 90  CAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPS-FVPLLRPEQSVAGWESCTPARTVCP 148
           CAQ+       AP     VPG      ++   P  + P      S     SC P   VC 
Sbjct: 105 CAQECVHGRCVAPNQCQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCS 164

Query: 149 CPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNP 208
           CP  +Q                  +P T   +     GP C+ R +   C    C  Q  
Sbjct: 165 CPSGLQPPNC-------------LQPCTPGYY-----GPACQFRCQ---CHGAPCDPQTG 203

Query: 209 TYRQSCFCSAQRVGP 223
               +CFC A+R GP
Sbjct: 204 ----ACFCPAERTGP 214



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 8/57 (14%)

Query: 253 HGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWG--CPAS 307
           +G +C  +  C   + C+ P+ G CV  ++G +     GNC   C P  WG  C AS
Sbjct: 443 YGVNCSARCSCENAIACS-PIDGECVC-KEGWQR----GNCSVPCPPGTWGFSCNAS 493


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 17/139 (12%)

Query: 99   PTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAA 158
            P    AP + PG    + +A  VP+  P+L P  +     +  P  +  P P + QT+A 
Sbjct: 1628 PVPVMAPSSTPGTS--LASASPVPAPTPVLAPSSTQTMLPA--PVPSPLPSPASTQTLAL 1683

Query: 159  EATEKASSLGG-SPQEPLTLNLHLLQLSGPGCEPRQELQLCSREACRWQNPTYRQSCFCS 217
             A   A +LGG SP + L+L     Q    G  P Q L L    +     PT  Q+   +
Sbjct: 1684 -APALAPTLGGSSPSQTLSLGTGNPQ----GPFPTQTLSLTPASSL---VPTPAQTLSLA 1735

Query: 218  AQRVGPRPLRPYATLAVEP 236
                GP PL P  TL++ P
Sbjct: 1736 P---GP-PLGPTQTLSLAP 1750


>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
          Length = 156

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%)

Query: 257 CQLKPICALVVKCAVPLWGGCVPGRQGLEASASS-GNCKSHCFPTAWGCPASDSSTPLCS 315
           C  KP+C  V  C+    G C   + G  +  SS G C S       GC  S+   P CS
Sbjct: 40  CCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSSKGGCGS------CGCSQSNCCKPCCS 93

Query: 316 T 316
           +
Sbjct: 94  S 94


>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
          Length = 615

 Score = 32.7 bits (73), Expect = 0.62
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)

Query: 165 SSLGGSPQEPLTL----NLHLLQLSGPGCEPRQELQLCSRE 201
           S LGG+P EP+ L    + HL  L  PG +PR+ L+  +R+
Sbjct: 296 SELGGTPDEPMDLEGAEDNHLSLLEAPGGQPRKSLRHSTRK 336


>gi|75709198 nephronectin [Homo sapiens]
          Length = 565

 Score = 32.7 bits (73), Expect = 0.62
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 94  KAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTV 153
           K  T PT    P+  P  PP +   L  P  +P   PE+   G  +  PA +  P  +TV
Sbjct: 313 KPTTRPTPKPTPIPTPPPPPPLPTELRTP--LPPTTPERPTTGLTTIAPAASTPPGGITV 370

Query: 154 QTVAAEATEKASSLGGSPQEP 174
                   +K       P++P
Sbjct: 371 DNRVQTDPQKPRGDVFIPRQP 391


>gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens]
          Length = 233

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 14/63 (22%)

Query: 93  DKAQTLPTAPTAPMAVPGQPPYILAAL-----AVPSFVPLLRPEQSVAGWESCTPARTVC 147
           D AQ  P +P AP  VP + P  LAA      A P  VPLL P  S         A TV 
Sbjct: 54  DAAQDSPASPCAPPGVPLRAPGPLAAAVPADKARPPAVPLLLPPAS---------AETVG 104

Query: 148 PCP 150
           P P
Sbjct: 105 PAP 107


>gi|239749949 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 106 MAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKAS 165
           +A+PG P + L        +PLL  + S+A      P  TV   P  V +VA E   + +
Sbjct: 113 LALPGWPAFALHTAGAQQSLPLLM-DNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPA 171

Query: 166 SLGGS 170
             GG+
Sbjct: 172 VTGGA 176


>gi|226529917 triosephosphate isomerase 1 isoform 2 [Homo sapiens]
          Length = 286

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/62 (27%), Positives = 28/62 (45%)

Query: 4   VWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSEEKV 63
           VWA    +       +  H++   W+KS     +    R  +GGSV+  TC + +S+  V
Sbjct: 205 VWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDV 264

Query: 64  RG 65
            G
Sbjct: 265 DG 266


>gi|4507645 triosephosphate isomerase 1 isoform 1 [Homo sapiens]
          Length = 249

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/62 (27%), Positives = 28/62 (45%)

Query: 4   VWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSEEKV 63
           VWA    +       +  H++   W+KS     +    R  +GGSV+  TC + +S+  V
Sbjct: 168 VWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDV 227

Query: 64  RG 65
            G
Sbjct: 228 DG 229


>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 547

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 34/138 (24%), Positives = 49/138 (35%), Gaps = 34/138 (24%)

Query: 129 RPEQSVAGWESCTPARTVCP-------------CPLTVQTVAAEATEKASSLGGSPQEPL 175
           RP  + A   S +PA T CP             CP+  +    +  ++  +L  SP++P 
Sbjct: 383 RPRPAPARSPSQSPAGTPCPVLSLGARRGVTLPCPVPAEAAPRDFCQRFPALEPSPRQP- 441

Query: 176 TLNLHLLQLSGPGCEPRQELQL-CSREACRWQNPTYR-------QSCFCSAQRVGPRPL- 226
                      P   PR    L    +AC W  P Y         + + S++   P PL 
Sbjct: 442 -----------PARAPRPSPDLPAPLDACPWAPPVYAPPAAPGPYAAWTSSRPARPAPLS 490

Query: 227 RPYATLAVEPVHCGQAQR 244
            P A     P   G A R
Sbjct: 491 HPTARAFQVPRRPGHAAR 508


>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
          Length = 177

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 239 CGQAQRATVGLQAR-HGKHCQLKPICALVVKCAVPLWGGCVPGRQGL-EASASSGNCKSH 296
           CG    +  G  +R +   C  KP+C+ V  C+    G C   + G      S G C S 
Sbjct: 42  CGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGS- 100

Query: 297 CFPTAWGCPASDSSTPLC 314
           C  +  GC +   S   C
Sbjct: 101 CGGSKGGCGSCGCSQSSC 118



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 275 GGCVPGRQGLEA-----SASSGNCKSHCFPTAWGCPASDSSTPLCS 315
           GGC  GR G  +     S+S G C S C+     C    S  P CS
Sbjct: 29  GGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACS 74


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 88  LKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQ-SVAGWESCTPARTV 146
           LK         P+ P  P AVP + P   A     +  P   PE+ + A     TP   V
Sbjct: 504 LKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGV 563

Query: 147 CPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQEL 195
              P  V    + ++  + S   SP EP      L    GP  EP +E+
Sbjct: 564 AAAPTLVSGGGSTSSTSSGSFEASPVEP-----QLPSKEGP--EPPEEV 605


>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
          Length = 739

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 14/128 (10%)

Query: 69  PNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLL 128
           P  +G  + A     G+ +L          PTA T P+     PP  + A+A P  VPL 
Sbjct: 403 PETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPL-----PPGPVPAVAAPQVVPLS 457

Query: 129 RPEQSVAGWESCTPARTVCPCPLTVQTVA-AEATEKASSLGGSPQEPLTL-------NLH 180
            P     G    +P   +     T Q V   +A      L   P  P+ +       N+H
Sbjct: 458 PPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVH 517

Query: 181 LLQLSGPG 188
           L+  SG G
Sbjct: 518 LIN-SGVG 524


>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
          Length = 469

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 16/124 (12%)

Query: 91  AQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCP 150
           AQ   +TL   PT+  ++P  P  + A+    + +P   PE +  G     P  T  PCP
Sbjct: 110 AQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMG----APVPTSMPCP 165

Query: 151 LTV----------QTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGCEPRQELQLCSR 200
           + +            +  +++E+  S   + QEP   +L  L  +    E  ++L L   
Sbjct: 166 VLLGPALDLGWRRMELLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSE--EQLTLKQE 223

Query: 201 EACR 204
           EA R
Sbjct: 224 EAFR 227


>gi|148833508 notch1 preproprotein [Homo sapiens]
          Length = 2555

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 12/69 (17%)

Query: 186 GPGCEPRQELQLCSRE--------ACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPV 237
           GP C  RQ++  C ++         C  +  +YR  C C A   GP   RPY   +  P 
Sbjct: 172 GPTC--RQDVNECGQKPGLCRHGGTCHNEVGSYR--CVCRATHTGPNCERPYVPCSPSPC 227

Query: 238 HCGQAQRAT 246
             G   R T
Sbjct: 228 QNGGTCRPT 236


>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
          Length = 2220

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 21/129 (16%)

Query: 48   SVSSGTCSQRSSEEKVRGCRVPNPRGLALEAWDACKGQWLLKCAQDKAQTLPTAPTAPMA 107
            ++ +G  + +S E K +     +PR    E  D  +      C  D  +T       P  
Sbjct: 1734 AMDAGDSADQSGERKDK----ESPRAGPTEPMDTSEAT---VCHSDLERT-------PPL 1779

Query: 108  VPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSL 167
            +PG+P       + P+ + L   E S++  +  TP     P P       A AT   +  
Sbjct: 1780 LPGRPARDRGPESRPTELSL--EELSISARQQPTPLTPAQPAP-----APAPATTTGTRA 1832

Query: 168  GGSPQEPLT 176
            GG P+EPL+
Sbjct: 1833 GGHPEEPLS 1841


>gi|194473700 Src homology 3 domain-containing guanine nucleotide
           exchange factor [Homo sapiens]
          Length = 871

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 99  PTAPTAPMAVPGQPPYILA----ALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 154
           P +P  P AVPG  P   A     L  P   P+LRP ++      CTP        LT  
Sbjct: 111 PKSPKLPKAVPGGSPKSPANGAVTLPAPPPPPVLRPPRTPNAPAPCTPEE-----DLTGL 165

Query: 155 TVAAEATEKASSLGGSPQEP 174
           T +   +  A+ L  +   P
Sbjct: 166 TASPVPSPTANGLAANNDSP 185


>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
          Length = 288

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 257 CQLKPICALVVKCAVPLWGGCVPGRQGL-EASASSGNCKSHCFPTAWGCPASDSSTPLCS 315
           C  KP+C  V  C+    G C   + G      S G C S C  +  GC +   S   C 
Sbjct: 54  CCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVS-CGGSKGGCGSCGGSKGGCG 112

Query: 316 T 316
           +
Sbjct: 113 S 113


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 9/144 (6%)

Query: 98  LPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESC-TPARTVCPCPLTVQTV 156
           LP  PTA +     P Y   A+ +PS    L P       ++   P     P  +  +T+
Sbjct: 817 LPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTI 876

Query: 157 AAEATEKASSLGGSPQEPLTLNLH--LLQLSGPGCEPRQELQLCSREACRWQNPTYRQSC 214
              A      L  +P     L++H  + QL G    P    Q+   +      P      
Sbjct: 877 VPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDV-----PPSPHHT 931

Query: 215 FCSAQRVGPRP-LRPYATLAVEPV 237
             + +   P+P L P  TL  +PV
Sbjct: 932 VQNMRATPPQPALPPQPTLPPQPV 955


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 17/88 (19%)

Query: 135 AGWESCTPARTVCPCPLTVQTVAAEATEKASSLG------GSPQEPLTLNLHLLQ----- 183
           AGW     +RT  P P+   T  + +   A+SLG        P  PL L +   +     
Sbjct: 760 AGWAGDAGSRTCSPAPIPPHTSDSCSKSGAASLGEEARDTPQPSSPLVLQVGRPEQGAVG 819

Query: 184 ------LSGPGCEPRQELQLCSREACRW 205
                  S PG +P QE Q        W
Sbjct: 820 PHRSHCCSQPGTQPAQEAQRGPSPEASW 847


>gi|205360989 hypothetical protein LOC205327 [Homo sapiens]
          Length = 385

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 10/76 (13%)

Query: 127 LLRPEQSVAGWESCTPARTVCP-------CPLTVQTVAAEATEKASSLGGSPQEPLTLNL 179
           LL P+  +    SC+ ART+ P       C L+ +    +  + ++  G  PQ   +  L
Sbjct: 14  LLLPQLGIGNASSCSQARTMNPGGSGGARCSLSAEVRRRQCLQLSTVPGADPQR--SNEL 71

Query: 180 HLLQLSGPGCEPRQEL 195
            LL  +G G E RQ+L
Sbjct: 72  LLLAAAGEGLE-RQDL 86


>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
          Length = 165

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 257 CQLKPICALVVKCAVPLWGGCVPGRQGL-EASASSGNCKSHCFPTAWGCPASDSSTPLC 314
           C  KP+C  V  C+    G C   + G      S G C S C  +  GC +   S   C
Sbjct: 40  CCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGGSKGGCGS-CGGSKGGCGSCGCSQCSC 97


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.466 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,390,109
Number of Sequences: 37866
Number of extensions: 1100866
Number of successful extensions: 3347
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 3313
Number of HSP's gapped (non-prelim): 70
length of query: 413
length of database: 18,247,518
effective HSP length: 105
effective length of query: 308
effective length of database: 14,271,588
effective search space: 4395649104
effective search space used: 4395649104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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