SIX5 27484

Name: SIX5	Sequence: fasta or formatted (739aa)		NCBI GI: 40354216
Description: sine oculis homeobox homolog 5		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.7 116 5 C cysteine 0.8 6 1 D aspartate 1.9 14 1 E glutamate 7.6 56 6 F phenylalanine 2.0 15 1 G glycine 10.7 79 4 H histidine 0.9 7 2 I isoleucine 1.4 10 2 K lysine 2.2 16 2 L leucine 12.2 90 3 M methionine 0.4 3 1 N asparagine 1.8 13 1 P proline 13.3 98 3 Q glutamine 4.1 30 2 R arginine 4.3 32 2 S serine 7.2 53 3 T threonine 5.5 41 2 V valine 6.5 48 2 W tryptophan 0.4 3 1 Y tyrosine 1.2 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sine oculis homeobox homolog 5 SIX4 0.201 sine oculis homeobox homolog 4 SIX2 0.143 SIX homeobox 2 SIX1 0.138 SIX homeobox 1 SIX3 0.138 sine oculis homeobox homolog 3 SIX6 0.130 SIX homeobox 6 SRCAP 0.033 Snf2-related CBP activator protein TSC22D2 0.031 TSC22 domain family, member 2 FLJ22184 0.029 PREDICTED: hypothetical protein FLJ22184 NACA 0.029 nascent polypeptide-associated complex alpha subuni... WNK2 0.029 WNK lysine deficient protein kinase 2 TAF4 0.028 TBP-associated factor 4 FMN2 0.027 formin 2 MBD6 0.026 methyl-CpG binding domain protein 6 FLJ22184 0.026 PREDICTED: hypothetical protein LOC80164 RAPH1 0.026 Ras association and pleckstrin homology domains 1 is... BCORL1 0.026 BCL6 co-repressor-like 1 KIAA1522 0.025 hypothetical protein LOC57648 RERE 0.024 atrophin-1 like protein isoform b RERE 0.024 atrophin-1 like protein isoform a RERE 0.024 atrophin-1 like protein isoform a KIAA0754 0.024 hypothetical protein LOC643314 LOC653548 0.024 PREDICTED: double homeobox, 4-like DUX4 0.024 double homeobox, 4 GLTSCR1 0.024 glioma tumor suppressor candidate region gene 1 [Ho... LOC728410 0.024 double homeobox, 4-like LOC653543 0.024 double homeobox, 4-like LOC653545 0.024 double homeobox, 4-like LOC653544 0.024 double homeobox, 4-like MUC17 0.024 mucin 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.