Guide to the Human Genome
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Name: TPI1 Sequence: fasta or formatted (286aa) NCBI GI: 226529917
Description:

triosephosphate isomerase 1 isoform 2

Referenced in:

Glycolysis

Other entries for this name:
alt prot [249aa] triosephosphate isomerase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.9         34           2
 C cysteine            1.7          5           1
 D aspartate           5.2         15           1
 E glutamate           7.3         21           2
 F phenylalanine       3.5         10           2
 G glycine             9.8         28           2
 H histidine           1.7          5           1
 I isoleucine          5.6         16           2
 K lysine              7.0         20           1
 L leucine             6.6         19           1
 M methionine          1.4          4           1
 N asparagine          2.8          8           1
 P proline             3.8         11           2
 Q glutamine           4.5         13           2
 R arginine            3.8         11           2
 S serine              5.2         15           2
 T threonine           5.2         15           1
 V valine              8.7         25           2
 W tryptophan          2.1          6           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   triosephosphate isomerase 1 isoform 2 
TPI1                  0.866   triosephosphate isomerase 1 isoform 1 
LOC100289735          0.011   PREDICTED: hypothetical protein XP_002348110 
LOC100288372          0.011   PREDICTED: hypothetical protein XP_002343796 
ATP1A4                0.005   Na+/K+ -ATPase alpha 4 subunit isoform 1 
LOC100291802          0.005   PREDICTED: hypothetical protein XP_002346199 
LOC100291215          0.005   PREDICTED: hypothetical protein XP_002347079 
LOC100287684          0.005   PREDICTED: hypothetical protein XP_002342945 
TRPM7                 0.005   transient receptor potential cation channel, subfam...
SLC25A24              0.005   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.005   solute carrier family 25 member 24 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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