Guide to the Human Genome
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Name: C2orf69 Sequence: fasta or formatted (385aa) NCBI GI: 205360989
Description:

hypothetical protein LOC205327

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         21           3
 C cysteine            2.3          9           1
 D aspartate           3.6         14           1
 E glutamate           5.7         22           2
 F phenylalanine       4.9         19           1
 G glycine             6.8         26           2
 H histidine           4.4         17           2
 I isoleucine          4.2         16           2
 K lysine              5.5         21           2
 L leucine             9.6         37           5
 M methionine          2.6         10           1
 N asparagine          6.0         23           1
 P proline             6.0         23           3
 Q glutamine           4.7         18           1
 R arginine            4.7         18           3
 S serine              9.1         35           2
 T threonine           4.4         17           2
 V valine              5.5         21           2
 W tryptophan          2.1          8           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC205327 
TMEM151B              0.009   transmembrane protein 151B 
ADAMTS19              0.009   ADAM metallopeptidase with thrombospondin type 1 mo...
LOC402269             0.008   PREDICTED: similar to SLC29A4 protein 
LOC100287294          0.008   PREDICTED: hypothetical protein XP_002342767 
LOC402269             0.008   PREDICTED: similar to SLC29A4 protein 
LOC728500             0.008   PREDICTED: similar to SLC29A4 protein 
EFCAB5                0.008   EF-hand calcium binding domain 5 isoform a 
CACNA1H               0.006   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.006   calcium channel, voltage-dependent, T type, alpha 1H...
TP53I13               0.006   tumor protein p53 inducible protein 13 
LCAT                  0.006   lecithin-cholesterol acyltransferase precursor 
GTPBP3                0.006   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GTPBP3                0.006   GTP binding protein 3 (mitochondrial) isoform IV [H...
LOC100289735          0.006   PREDICTED: hypothetical protein XP_002348110 
LOC100133744          0.006   PREDICTED: similar to EF-hand calcium binding domai...
LOC100288372          0.006   PREDICTED: hypothetical protein XP_002343796 
LOC441086             0.006   PREDICTED: hypothetical protein 
SLC29A4               0.006   solute carrier family 29 (nucleoside transporters),...
SLC29A4               0.006   solute carrier family 29 (nucleoside transporters),...
ZNF253                0.006   zinc finger protein 253 
LOC100128370          0.005   PREDICTED: hypothetical protein 
LOC100132214          0.005   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.005   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100128370          0.005   PREDICTED: hypothetical protein 
LOC100132214          0.005   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.005   PREDICTED: similar to calcium-promoted Ras inactiva...
FAAH2                 0.005   fatty acid amide hydrolase 2 
LY9                   0.005   lymphocyte antigen 9 isoform a 
HDAC7                 0.005   histone deacetylase 7 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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