RB1 301

Name: RB1	Sequence: fasta or formatted (928aa)		NCBI GI: 108773787
Description: retinoblastoma 1		Referenced in: CREB / ATF Family Cyclins and Related Functions E2F Pathways Ets Family Histones, Related Proteins, and Modifying Enzymes LIM Domain Proteins Nonhistone Chromosomal Proteins RB1 and Related Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 44 6 C cysteine 1.6 15 1 D aspartate 4.8 45 2 E glutamate 7.9 73 3 F phenylalanine 4.2 39 2 G glycine 3.1 29 2 H histidine 1.8 17 1 I isoleucine 6.5 60 2 K lysine 8.2 76 3 L leucine 10.9 101 2 M methionine 3.0 28 2 N asparagine 4.8 45 2 P proline 6.5 60 7 Q glutamine 3.8 35 2 R arginine 5.0 46 2 S serine 8.5 79 3 T threonine 5.9 55 2 V valine 5.0 46 2 W tryptophan 0.8 7 1 Y tyrosine 3.0 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoblastoma 1 RBL2 0.093 retinoblastoma-like 2 (p130) RBL1 0.085 retinoblastoma-like protein 1 isoform a RBL1 0.085 retinoblastoma-like protein 1 isoform b MAP3K4 0.013 mitogen-activated protein kinase kinase kinase 4 iso... MAP3K4 0.013 mitogen-activated protein kinase kinase kinase 4 iso... MAZ 0.009 MYC-associated zinc finger protein isoform 2 MAZ 0.009 MYC-associated zinc finger protein isoform 1 MYL1 0.009 fast skeletal myosin alkali light chain 1 isoform 1f... APBB1IP 0.009 amyloid beta (A4) precursor protein-binding, family ... DGKD 0.008 diacylglycerol kinase, delta 130kDa isoform 2 SAMD1 0.008 sterile alpha motif domain containing 1 ABI1 0.008 abl-interactor 1 isoform d ABI1 0.008 abl-interactor 1 isoform b ABI1 0.008 abl-interactor 1 isoform a WAS 0.008 Wiskott-Aldrich syndrome protein WIPF3 0.008 WAS/WASL interacting protein family, member 3 [Homo... SRPK2 0.008 serine/arginine-rich protein-specific kinase 2 isofo... ABI1 0.008 abl-interactor 1 isoform c ZFHX4 0.008 zinc finger homeodomain 4 SOBP 0.008 sine oculis binding protein homolog NAT6 0.008 N-acetyltransferase 6 MEX3C 0.008 ring finger and KH domain containing 2 JMY 0.007 junction-mediating and regulatory protein PRRT2 0.007 proline-rich transmembrane protein 2 MANEAL 0.007 mannosidase, endo-alpha-like isoform 3 MANEAL 0.007 mannosidase, endo-alpha-like isoform 1 FNBP4 0.007 formin binding protein 4 ASXL3 0.007 additional sex combs like 3 SLC16A2 0.007 solute carrier family 16, member 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.