Guide to the Human Genome
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Name: TXLNA Sequence: fasta or formatted (546aa) NCBI GI: 28460688
Description:

taxilin

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         41           2
 C cysteine            1.1          6           1
 D aspartate           3.7         20           1
 E glutamate          14.3         78           4
 F phenylalanine       1.3          7           1
 G glycine             5.7         31           2
 H histidine           2.0         11           1
 I isoleucine          1.5          8           1
 K lysine              9.9         54           3
 L leucine             9.3         51           2
 M methionine          2.2         12           1
 N asparagine          3.5         19           2
 P proline             5.3         29           1
 Q glutamine           9.2         50           3
 R arginine            7.0         38           2
 S serine              6.8         37           2
 T threonine           4.8         26           2
 V valine              3.7         20           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   taxilin 
CXorf15               0.445   gamma-taxilin 
TXLNB                 0.435   taxilin beta 
CYorf15B              0.111   lipopolysaccaride-specific response 5-like protein [...
DSP                   0.056   desmoplakin isoform I 
CEP164                0.054   centrosomal protein 164kDa 
CENPE                 0.054   centromere protein E 
CCDC88A               0.054   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.054   coiled-coil domain containing 88A isoform 1 
HOOK1                 0.053   hook homolog 1 
EEA1                  0.050   early endosome antigen 1, 162kD 
WDR87                 0.050   NYD-SP11 protein 
LOC645202             0.050   PREDICTED: hypothetical protein LOC645202 
LOC283685             0.049   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.048   trichohyalin 
SLK                   0.048   serine/threonine kinase 2 
NUMA1                 0.048   nuclear mitotic apparatus protein 1 
LOC727832             0.048   golgi autoantigen, golgin subfamily a-like 
FILIP1                0.047   filamin A interacting protein 1 
MYH9                  0.047   myosin, heavy polypeptide 9, non-muscle 
MYH1                  0.047   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.047   myosin, heavy polypeptide 4, skeletal muscle 
CCDC18                0.046   sarcoma antigen NY-SAR-41 
LOC440243             0.046   PREDICTED: Putative golgin subfamily A member 6-lik...
CENPF                 0.046   centromere protein F 
PLEC1                 0.045   plectin 1 isoform 11 
PLEC1                 0.045   plectin 1 isoform 10 
PLEC1                 0.045   plectin 1 isoform 8 
PLEC1                 0.045   plectin 1 isoform 7 
PLEC1                 0.045   plectin 1 isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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