Guide to the Human Genome
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Name: FBXW2 Sequence: fasta or formatted (454aa) NCBI GI: 118402584
Description:

F-box and WD repeat domain containing 2

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         26           2
 C cysteine            3.1         14           2
 D aspartate           7.0         32           2
 E glutamate           4.6         21           1
 F phenylalanine       3.7         17           1
 G glycine             5.7         26           1
 H histidine           3.3         15           1
 I isoleucine          4.8         22           1
 K lysine              6.6         30           2
 L leucine            14.8         67           2
 M methionine          0.9          4           1
 N asparagine          3.1         14           2
 P proline             2.0          9           1
 Q glutamine           3.3         15           1
 R arginine            3.5         16           1
 S serine              8.6         39           2
 T threonine           6.4         29           1
 V valine              5.9         27           2
 W tryptophan          3.5         16           1
 Y tyrosine            3.3         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 2 
FBXW7                 0.113   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.113   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.113   F-box and WD repeat domain containing 7 isoform 2 [H...
FBXW11                0.088   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.088   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.088   F-box and WD repeat domain containing 11 isoform B [...
BTRC                  0.086   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.086   beta-transducin repeat containing protein isoform 1 ...
WDR69                 0.075   WD repeat domain 69 
SNRNP40               0.068   WD repeat domain 57 (U5 snRNP specific) 
WDR5                  0.067   WD repeat domain 5 
WDR5                  0.067   WD repeat domain 5 
WDR5B                 0.062   WD repeat domain 5B 
WDR86                 0.062   WD repeat domain 86 
PAFAH1B1              0.059   platelet-activating factor acetylhydrolase, isoform I...
PLRG1                 0.054   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
KATNB1                0.054   katanin p80 subunit B 1 
GNB2L1                0.052   guanine nucleotide binding protein (G protein), beta ...
TBL3                  0.052   transducin beta-like 3 
TAF5L                 0.048   PCAF associated factor 65 beta isoform a 
SMU1                  0.048   smu-1 suppressor of mec-8 and unc-52 homolog 
NLE1                  0.048   Notchless gene homolog isoform a 
TAF5                  0.048   TBP-associated factor 5 
WDR51A                0.047   WD repeat domain 51A isoform 3 
WDR51A                0.047   WD repeat domain 51A isoform 2 
WDR51A                0.047   WD repeat domain 51A isoform 1 
CDRT1                 0.047   CMT1A duplicated region transcript 1 
GNB1                  0.044   guanine nucleotide-binding protein, beta-1 subunit [...
COPB2                 0.044   coatomer protein complex, subunit beta 2 (beta prime)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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