CDRT1 6327

Name: CDRT1	Sequence: fasta or formatted (752aa)		NCBI GI: 157694487
Description: CMT1A duplicated region transcript 1		Referenced in: Cullins and SCF Complexes WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 44 2 C cysteine 3.1 23 1 D aspartate 4.9 37 2 E glutamate 4.1 31 3 F phenylalanine 4.1 31 2 G glycine 6.0 45 2 H histidine 3.1 23 1 I isoleucine 6.2 47 2 K lysine 6.8 51 2 L leucine 10.4 78 4 M methionine 2.7 20 1 N asparagine 5.5 41 2 P proline 3.3 25 1 Q glutamine 4.0 30 2 R arginine 5.7 43 2 S serine 7.6 57 2 T threonine 5.3 40 2 V valine 6.4 48 2 W tryptophan 2.1 16 1 Y tyrosine 2.9 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CMT1A duplicated region transcript 1 FBXW10 0.883 F-box and WD-40 domain protein 10 LOC100133998 0.484 PREDICTED: similar to CMT1A duplicated region trans... FBXW7 0.064 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.064 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.064 F-box and WD repeat domain containing 7 isoform 2 [H... FBXW11 0.048 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.048 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.048 F-box and WD repeat domain containing 11 isoform B [... BTRC 0.046 beta-transducin repeat containing protein isoform 2 [... BTRC 0.046 beta-transducin repeat containing protein isoform 1 ... WDR5 0.044 WD repeat domain 5 WDR5 0.044 WD repeat domain 5 WDR5B 0.044 WD repeat domain 5B PAFAH1B1 0.043 platelet-activating factor acetylhydrolase, isoform I... WDR86 0.040 WD repeat domain 86 TAF5 0.037 TBP-associated factor 5 KATNB1 0.036 katanin p80 subunit B 1 TBL3 0.034 transducin beta-like 3 TAF5L 0.034 PCAF associated factor 65 beta isoform a SNRNP40 0.033 WD repeat domain 57 (U5 snRNP specific) WDR48 0.032 WD repeat domain 48 GNB2L1 0.032 guanine nucleotide binding protein (G protein), beta ... WDR69 0.032 WD repeat domain 69 WDR38 0.031 WD repeat domain 38 TRAF7 0.030 TNF receptor-associated factor 7 PLRG1 0.030 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... GNB1 0.029 guanine nucleotide-binding protein, beta-1 subunit [... GNB3 0.028 guanine nucleotide-binding protein, beta-3 subunit [H... FBXW2 0.028 F-box and WD repeat domain containing 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.