BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens] (166 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 359 e-100 gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 359 e-100 gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 44 5e-05 gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 39 0.002 gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 38 0.003 gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 38 0.003 gi|34304381 inversin isoform a [Homo sapiens] 38 0.005 gi|34304379 inversin isoform b [Homo sapiens] 38 0.005 gi|163965366 nascent polypeptide-associated complex alpha subuni... 38 0.005 gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 37 0.006 gi|241982780 programmed cell death 6 interacting protein isoform... 36 0.013 gi|22027538 programmed cell death 6 interacting protein isoform ... 36 0.013 gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.029 gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.038 gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.038 gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 35 0.038 gi|55750053 atrophin-1 [Homo sapiens] 35 0.038 gi|55750041 atrophin-1 [Homo sapiens] 35 0.038 gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 34 0.050 gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 34 0.050 gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 34 0.066 gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 34 0.066 gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 33 0.086 gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 33 0.086 gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 33 0.086 gi|81174549 hypothetical protein LOC84792 [Homo sapiens] 33 0.086 gi|154146199 sal-like 3 [Homo sapiens] 33 0.086 gi|169162422 PREDICTED: hypothetical protein [Homo sapiens] 33 0.11 gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 33 0.11 gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 33 0.15 >gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens] Length = 166 Score = 359 bits (921), Expect = e-100 Identities = 166/166 (100%), Positives = 166/166 (100%) Query: 1 MAKREYSSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPT 60 MAKREYSSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPT Sbjct: 1 MAKREYSSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPT 60 Query: 61 LIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVP 120 LIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVP Sbjct: 61 LIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVP 120 Query: 121 GTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPSTHT 166 GTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPSTHT Sbjct: 121 GTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPSTHT 166 >gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens] Length = 166 Score = 359 bits (921), Expect = e-100 Identities = 166/166 (100%), Positives = 166/166 (100%) Query: 1 MAKREYSSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPT 60 MAKREYSSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPT Sbjct: 1 MAKREYSSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPT 60 Query: 61 LIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVP 120 LIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVP Sbjct: 61 LIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVP 120 Query: 121 GTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPSTHT 166 GTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPSTHT Sbjct: 121 GTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPSTHT 166 >gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] Length = 426 Score = 44.3 bits (103), Expect = 5e-05 Identities = 46/145 (31%), Positives = 53/145 (36%), Gaps = 30/145 (20%) Query: 21 VGEETVPGVRVSLVRT---MPSRCHCHSPILPNPPSLPPSLPTLIPPPFLLWGRFSHSHS 77 VG P V SL R RCHC LP PP L P L + PP S + S Sbjct: 151 VGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS 210 Query: 78 QTPAPRIWAQGPRSRDAGRG-PAPK--GRG------------------GRGSACCLPWGR 116 +P PR + AG G P P+ RG GR C L G Sbjct: 211 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCAL--GS 268 Query: 117 SEVPGTPVRVPAA----AAREWAKR 137 +P P A AAR+W KR Sbjct: 269 PPIPAGPAAPGRAGERRAARQWRKR 293 Score = 30.4 bits (67), Expect = 0.73 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 79 TPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVPGTPV-RVPAAAAREW 134 TP PR A G P P+G G A C P R+ P P + P AREW Sbjct: 8 TPHPRTPAPGCPEV----APQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREW 60 Score = 28.1 bits (61), Expect = 3.6 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 92 RDAGRGPAPKGRGGRGSACCLPW-GRSEVPGTPVRVPAAAAREWAKREHA 140 R+A GPAP RGS P R P + + PAAAAR R+ + Sbjct: 93 REASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRS 142 >gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] Length = 1488 Score = 39.3 bits (90), Expect = 0.002 Identities = 32/77 (41%), Positives = 35/77 (45%), Gaps = 12/77 (15%) Query: 46 PILPNPPSLPPSLPTL--IPPPFLL---WGRFSHSHSQTPAPRIWAQGPRSRDAGR-GPA 99 P LP PP PP LP L IPPP G H H+ P P GP+ GR G A Sbjct: 1288 PSLPPPPQQPPPLPQLGSIPPPPASAPPVGPHRHFHAHGPVP-----GPQHYTLGRPGRA 1342 Query: 100 PKGRGGRGSACCLPWGR 116 P+ RG G P GR Sbjct: 1343 PR-RGAGGHPQFAPHGR 1358 >gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo sapiens] Length = 239 Score = 38.1 bits (87), Expect = 0.003 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 12/87 (13%) Query: 76 HSQTPAPRIWAQGPRSRDAGRGPAPKGRGGR---------GSACCLPWGRSEVPGTPVRV 126 HS P PR Q ++R G GP+ G GR G+ LP G S +P P + Sbjct: 96 HSWAPRPR---QASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSL 152 Query: 127 PAAAAREWAKREHACISKKPARSLDFP 153 AA+A + RE +P + FP Sbjct: 153 AAASAWQAVARELGLSGPRPTEAPPFP 179 >gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] Length = 322 Score = 38.1 bits (87), Expect = 0.003 Identities = 49/172 (28%), Positives = 59/172 (34%), Gaps = 47/172 (27%) Query: 30 RVSLVRTMPSRCHCHSPILPNPP-----------SLP------------------PSLPT 60 R SL +P +CH H P PP S P P LP Sbjct: 160 RASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPV 219 Query: 61 L--IPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGR--GGRGSACCLP--- 113 L +P P L R + + AP G +S + RGP P+ + G R A C P Sbjct: 220 LGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCG 279 Query: 114 -WGRSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPST 164 GR P R P AA + PA F AL PR P T Sbjct: 280 RLGRGYQQRLPSRSPHAAP----------AAPAPALRSSFMFLALFPRKPGT 321 >gi|34304381 inversin isoform a [Homo sapiens] Length = 1065 Score = 37.7 bits (86), Expect = 0.005 Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 12/113 (10%) Query: 52 PSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACC 111 P P LP+ P R S + S+ P AQGP RD+ P G G A Sbjct: 620 PQALPCLPSTQDVP----SRQSRAPSKQPPAGNVAQGPEPRDSRGSPG----GSLGGALQ 671 Query: 112 LPWG-RSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPS 163 S++ GT R P ARE +K + AC+ +P D + HP PS Sbjct: 672 KEQHVSSDLQGTNSRRPNETAREHSKGQSACVHFRPNEGSD---GSRHPGVPS 721 >gi|34304379 inversin isoform b [Homo sapiens] Length = 895 Score = 37.7 bits (86), Expect = 0.005 Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 12/113 (10%) Query: 52 PSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACC 111 P P LP+ P R S + S+ P AQGP RD+ P G G A Sbjct: 620 PQALPCLPSTQDVP----SRQSRAPSKQPPAGNVAQGPEPRDSRGSPG----GSLGGALQ 671 Query: 112 LPWG-RSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPS 163 S++ GT R P ARE +K + AC+ +P D + HP PS Sbjct: 672 KEQHVSSDLQGTNSRRPNETAREHSKGQSACVHFRPNEGSD---GSRHPGVPS 721 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 37.7 bits (86), Expect = 0.005 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%) Query: 45 SPILPNPPSLPPS---LPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPK 101 +P+ P +LPP P+++ PF G + + Q PA + + P+ A PAPK Sbjct: 871 TPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT--PAPK 928 Query: 102 GRGGRGSACCLPWGRSEVPGTPVRVPAAAAREWAKREHACISKKP 146 G S P + P +P PA + +WA A P Sbjct: 929 GIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973 Score = 28.9 bits (63), Expect = 2.1 Identities = 40/163 (24%), Positives = 54/163 (33%), Gaps = 17/163 (10%) Query: 8 STPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLIP---- 63 +TP P P P + G + PS +P PPS P P P Sbjct: 978 ATPSPKGAPTPPAATPPSPKGGPAT-----PSPKGAPTPPAVTPPS-PKGSPAATPFPKG 1031 Query: 64 ---PPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVP 120 PP S + TP P+ G + A P+PKG S P + P Sbjct: 1032 ASTPPAATPPSPKGSPAATPLPK----GAPTTPAATLPSPKGGPATPSLKGAPTPPAATP 1087 Query: 121 GTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPS 163 +P PA + + A A P L P P +P+ Sbjct: 1088 PSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPA 1130 >gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo sapiens] Length = 1336 Score = 37.4 bits (85), Expect = 0.006 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 46 PILPNPPSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGG 105 P P+PP+ P + T + PP R + PAP W + GP G GG Sbjct: 1025 PGFPSPPAPPAAAATAVGPPLC---RLAFEDESPPAPARWPRSDPESQPLLGPGAGGAGG 1081 Query: 106 RGSA 109 G A Sbjct: 1082 TGGA 1085 >gi|241982780 programmed cell death 6 interacting protein isoform 2 [Homo sapiens] Length = 873 Score = 36.2 bits (82), Expect = 0.013 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Query: 23 EETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSL---PTLIPPPFLLWGRFSHSHSQT 79 E + P + ++ P+ H +P P P ++PP+ P PPP L R + + + Sbjct: 721 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPS 780 Query: 80 PAPRIWAQGPRSRDAGRGPAPKGRG 104 P A S+ G P P+ +G Sbjct: 781 PVGAGTAAPAPSQTPGSAPPPQAQG 805 >gi|22027538 programmed cell death 6 interacting protein isoform 1 [Homo sapiens] Length = 868 Score = 36.2 bits (82), Expect = 0.013 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Query: 23 EETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSL---PTLIPPPFLLWGRFSHSHSQT 79 E + P + ++ P+ H +P P P ++PP+ P PPP L R + + + Sbjct: 716 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPS 775 Query: 80 PAPRIWAQGPRSRDAGRGPAPKGRG 104 P A S+ G P P+ +G Sbjct: 776 PVGAGTAAPAPSQTPGSAPPPQAQG 800 >gi|146134388 YLP motif containing 1 [Homo sapiens] Length = 2146 Score = 35.0 bits (79), Expect = 0.029 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 8/61 (13%) Query: 6 YSSTPLPLDYPKQPEVGEETVPGVRV-SLVRTMPSRCHCHSPILPNPPSLPPSLPTLIPP 64 YS P PL P + P V +L T+P P +P PP +PPSLPT +PP Sbjct: 523 YSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPP------PGMP-PPVMPPSLPTSVPP 575 Query: 65 P 65 P Sbjct: 576 P 576 Score = 28.1 bits (61), Expect = 3.6 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Query: 46 PILPNPPSLPPSLPTLIPPPFL 67 P +P PP LPPSLP + PP L Sbjct: 531 PTMP-PPVLPPSLPPPVMPPAL 551 >gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo sapiens] Length = 1188 Score = 34.7 bits (78), Expect = 0.038 Identities = 44/181 (24%), Positives = 63/181 (34%), Gaps = 34/181 (18%) Query: 10 PLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLI-----PP 64 PL L+ P P + P ++ + SP +P PP P P L PP Sbjct: 175 PLLLEPPPPPSMAPPPPP-----VLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPP 229 Query: 65 PFLLWGRFSHSHSQTPAPRIWAQGP------------RSRDAGRGPAPKGRGG-RGSAC- 110 P + + T R++ G R +A R P+ +GSA Sbjct: 230 PVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALG 289 Query: 111 -------CLPWGRSEVPGTPVR---VPAAAAREWAKREHACISKKPARSLDFPVFALHPR 160 P P TPVR +P A+E ++E K P+R P F + P Sbjct: 290 PNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPA 349 Query: 161 S 161 S Sbjct: 350 S 350 >gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo sapiens] Length = 1188 Score = 34.7 bits (78), Expect = 0.038 Identities = 44/181 (24%), Positives = 63/181 (34%), Gaps = 34/181 (18%) Query: 10 PLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLI-----PP 64 PL L+ P P + P ++ + SP +P PP P P L PP Sbjct: 175 PLLLEPPPPPSMAPPPPP-----VLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPP 229 Query: 65 PFLLWGRFSHSHSQTPAPRIWAQGP------------RSRDAGRGPAPKGRGG-RGSAC- 110 P + + T R++ G R +A R P+ +GSA Sbjct: 230 PVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALG 289 Query: 111 -------CLPWGRSEVPGTPVR---VPAAAAREWAKREHACISKKPARSLDFPVFALHPR 160 P P TPVR +P A+E ++E K P+R P F + P Sbjct: 290 PNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPA 349 Query: 161 S 161 S Sbjct: 350 S 350 >gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sapiens] Length = 1188 Score = 34.7 bits (78), Expect = 0.038 Identities = 44/181 (24%), Positives = 63/181 (34%), Gaps = 34/181 (18%) Query: 10 PLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLI-----PP 64 PL L+ P P + P ++ + SP +P PP P P L PP Sbjct: 175 PLLLEPPPPPSMAPPPPP-----VLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPP 229 Query: 65 PFLLWGRFSHSHSQTPAPRIWAQGP------------RSRDAGRGPAPKGRGG-RGSAC- 110 P + + T R++ G R +A R P+ +GSA Sbjct: 230 PVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALG 289 Query: 111 -------CLPWGRSEVPGTPVR---VPAAAAREWAKREHACISKKPARSLDFPVFALHPR 160 P P TPVR +P A+E ++E K P+R P F + P Sbjct: 290 PNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPA 349 Query: 161 S 161 S Sbjct: 350 S 350 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 34.7 bits (78), Expect = 0.038 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 15/128 (11%) Query: 46 PILPNPPSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQ-------GPRSRDAGRGP 98 P P P + P P L PPP L R ++ S +P P + AQ P + G G Sbjct: 286 PSAPPPANFPHVTPNLPPPPAL---RPLNNASASP-PGLGAQPLPGHLPSPHAMGQGMGG 341 Query: 99 AP----KGRGGRGSACCLPWGRSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPV 154 P KG S LP S P P+R P +++ + + S + + FP Sbjct: 342 LPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401 Query: 155 FALHPRSP 162 P P Sbjct: 402 SQALPSYP 409 Score = 28.1 bits (61), Expect = 3.6 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 7 SSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPIL---PNPPSLPPSLPTLIP 63 ++TP P T PG R + P SP + P PP+ P LP+L P Sbjct: 651 TATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPP 710 Query: 64 PP 65 PP Sbjct: 711 PP 712 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 34.7 bits (78), Expect = 0.038 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 15/128 (11%) Query: 46 PILPNPPSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQ-------GPRSRDAGRGP 98 P P P + P P L PPP L R ++ S +P P + AQ P + G G Sbjct: 286 PSAPPPANFPHVTPNLPPPPAL---RPLNNASASP-PGLGAQPLPGHLPSPHAMGQGMGG 341 Query: 99 AP----KGRGGRGSACCLPWGRSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPV 154 P KG S LP S P P+R P +++ + + S + + FP Sbjct: 342 LPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401 Query: 155 FALHPRSP 162 P P Sbjct: 402 SQALPSYP 409 Score = 28.1 bits (61), Expect = 3.6 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 7 SSTPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPIL---PNPPSLPPSLPTLIP 63 ++TP P T PG R + P SP + P PP+ P LP+L P Sbjct: 651 TATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPP 710 Query: 64 PP 65 PP Sbjct: 711 PP 712 >gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] Length = 1805 Score = 34.3 bits (77), Expect = 0.050 Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 19/100 (19%) Query: 42 HCHSPILPNPPSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPK 101 H HS LP S S+ + PP +W H ++ P WA G RSR +G P Sbjct: 1430 HSHSTTLPRDYSTLTSVSSHGLPP--IW-----EHGRSRLPLSWALGSRSRAQMKG-FPP 1481 Query: 102 GRGGR------GSACCLPWG-----RSEVPGTPVRVPAAA 130 RG R G WG + VP TP R+ +A Sbjct: 1482 SRGPRDSIILAGRPAAPSWGPDSRLTAGVPDTPTRLVFSA 1521 >gi|45120115 hypothetical protein LOC56905 [Homo sapiens] Length = 1047 Score = 34.3 bits (77), Expect = 0.050 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 16/94 (17%) Query: 8 STPLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLIPPPFL 67 STP P QP + P + + ++ P C S LP+PP++ + P P P Sbjct: 669 STPTSAPAPTQPAPTPTSGP-IGLRILAQQPLSVTCFSLALPSPPAVAVASPAPAPAP-- 725 Query: 68 LWGRFSHSHSQTPAPRIWAQGPRS-RDAGRGPAP 100 +PAP AQ P S RD PAP Sbjct: 726 -----------SPAP-ARAQAPASARDPAPAPAP 747 >gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sapiens] Length = 2715 Score = 33.9 bits (76), Expect = 0.066 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 9/76 (11%) Query: 49 PNPPSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGP-APKGRGGRG 107 P PP PP LP+ PPP ++P P + A R R GR P P R R Sbjct: 432 PPPPVSPPPLPSPPPPP------AQEEQEESPPPVVPATCSRKR--GRPPLTPSQRAERE 483 Query: 108 SACCLPWGRSEVPGTP 123 +A P G S TP Sbjct: 484 AARAGPEGTSPPTPTP 499 Score = 32.7 bits (73), Expect = 0.15 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 17/94 (18%) Query: 11 LPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLIPPPFLLWG 70 L LD P +P GEE+ P SP+LP P PP +P PP LL Sbjct: 2335 LDLDRPGEP-AGEES------------PGPLQERSPLLPLPEDGPPQVPD-GPPDLLLES 2380 Query: 71 RFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRG 104 ++ H + + + P S D APK G Sbjct: 2381 QWHHYSGEASSSE---EEPPSPDDKENQAPKRTG 2411 Score = 28.9 bits (63), Expect = 2.1 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 10 PLPLDYPKQPEVGEET---VPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLIPPP 65 P P+ P + T +P R S++R R + LP PP PP P PPP Sbjct: 577 PAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPP 635 Score = 26.9 bits (58), Expect = 8.0 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 96 RGPAPKGRGGRGSACCLPWGR-SEVPGTPVRVPA 128 RG AP+GRG + LP R ++V TP + PA Sbjct: 145 RGRAPRGRGRKHKTTPLPPPRLADVAPTPPKTPA 178 Score = 26.9 bits (58), Expect = 8.0 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 5/58 (8%) Query: 48 LPNPPSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGG 105 +P P PP +P G + P P +G +S GRG +GRGG Sbjct: 247 IPKPEPPPPVVPVKHQT-----GSWKCKEGPGPGPGTPRRGGQSSRGGRGGRGRGRGG 299 >gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] Length = 464 Score = 33.9 bits (76), Expect = 0.066 Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 13/118 (11%) Query: 49 PNPPSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGS 108 P PP LPP P + PP ++ S H PAP + P G P G Sbjct: 275 PGPPQLPPPAPGVHPPAPVVHPPASGVH--PPAPGVHPPAPGVHPPAPGVHPPTSGVHPP 332 Query: 109 ACCLPWGRSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFA-LHPRSPSTH 165 A P PG V PA A H PA + P A +HP++P H Sbjct: 333 A---PGVHPPAPG--VHPPAPGVHPPAPGVH-----PPAPGVHPPPSAGVHPQAPGVH 380 Score = 28.9 bits (63), Expect = 2.1 Identities = 38/121 (31%), Positives = 43/121 (35%), Gaps = 19/121 (15%) Query: 49 PNPPSLPPSLPTL-IPPPFLLWG---RFSHSHSQTPAPRIWAQGPRSRDAGRGPAPKGRG 104 P PPSLP P + PPP L+ G R S P P P GPAP G Sbjct: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPP--GGLPLPPMPPTGPAPSGPP 275 Query: 105 GRGSACCLPWGRSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPST 164 G LP P V PA A H PA + P +HP +P Sbjct: 276 GPPQ---LP-----PPAPGVHPPAPVVHPPASGVH-----PPAPGVHPPAPGVHPPAPGV 322 Query: 165 H 165 H Sbjct: 323 H 323 Score = 28.1 bits (61), Expect = 3.6 Identities = 43/162 (26%), Positives = 51/162 (31%), Gaps = 27/162 (16%) Query: 10 PLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSPILPNPPSLPPSLPTLIP-PPFLL 68 P P P P PGV+ R P + P P P SLPP P +P PP Sbjct: 218 PAPPSLPAGP-------PGVK----RPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPP 266 Query: 69 WGRFSHS-----HSQTPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVPGTP 123 G PAP + P G P G A P PG Sbjct: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPA---PGVHPPAPG-- 321 Query: 124 VRVPAAAAREWAKREHACISKKPARSLDFPVFALHPRSPSTH 165 V P + A H PA + P +HP +P H Sbjct: 322 VHPPTSGVHPPAPGVH-----PPAPGVHPPAPGVHPPAPGVH 358 Score = 28.1 bits (61), Expect = 3.6 Identities = 25/101 (24%), Positives = 32/101 (31%), Gaps = 10/101 (9%) Query: 10 PLPLDYPKQPEVGEETVPGVRVSLVRTMPSRCHCHSP----------ILPNPPSLPPSLP 59 P P +P PGV + P H P + P PP + PS P Sbjct: 360 PAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAP 419 Query: 60 TLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPAP 100 + P P + H TP P + S G P P Sbjct: 420 GVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPP 460 >gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo sapiens] Length = 307 Score = 33.5 bits (75), Expect = 0.086 Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 19/119 (15%) Query: 44 HSPILPNP----PSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPA 99 H P P P P LPP+ P PP L S Q R A+ R P Sbjct: 39 HPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLR-----PP 93 Query: 100 PKGRGGRGSACCLPWG--RSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFA 156 + RGG C P G S PG +P+AAA A++ C RS++ P A Sbjct: 94 WEVRGGARGPCSAPVGSRASSGPG----LPSAAAARPARKTLTC----QPRSIESPATA 144 Score = 26.9 bits (58), Expect = 8.0 Identities = 18/52 (34%), Positives = 21/52 (40%) Query: 79 TPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVPGTPVRVPAAA 130 TP PR R R G G GRGGR +A + + R AAA Sbjct: 241 TPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAA 292 >gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo sapiens] Length = 325 Score = 33.5 bits (75), Expect = 0.086 Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 19/119 (15%) Query: 44 HSPILPNP----PSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPA 99 H P P P P LPP+ P PP L S Q R A+ R P Sbjct: 57 HPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLR-----PP 111 Query: 100 PKGRGGRGSACCLPWG--RSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFA 156 + RGG C P G S PG +P+AAA A++ C RS++ P A Sbjct: 112 WEVRGGARGPCSAPVGSRASSGPG----LPSAAAARPARKTLTC----QPRSIESPATA 162 Score = 26.9 bits (58), Expect = 8.0 Identities = 18/52 (34%), Positives = 21/52 (40%) Query: 79 TPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVPGTPVRVPAAA 130 TP PR R R G G GRGGR +A + + R AAA Sbjct: 259 TPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAA 310 >gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo sapiens] Length = 325 Score = 33.5 bits (75), Expect = 0.086 Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 19/119 (15%) Query: 44 HSPILPNP----PSLPPSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRDAGRGPA 99 H P P P P LPP+ P PP L S Q R A+ R P Sbjct: 57 HPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLR-----PP 111 Query: 100 PKGRGGRGSACCLPWG--RSEVPGTPVRVPAAAAREWAKREHACISKKPARSLDFPVFA 156 + RGG C P G S PG +P+AAA A++ C RS++ P A Sbjct: 112 WEVRGGARGPCSAPVGSRASSGPG----LPSAAAARPARKTLTC----QPRSIESPATA 162 Score = 26.9 bits (58), Expect = 8.0 Identities = 18/52 (34%), Positives = 21/52 (40%) Query: 79 TPAPRIWAQGPRSRDAGRGPAPKGRGGRGSACCLPWGRSEVPGTPVRVPAAA 130 TP PR R R G G GRGGR +A + + R AAA Sbjct: 259 TPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAA 310 >gi|81174549 hypothetical protein LOC84792 [Homo sapiens] Length = 259 Score = 33.5 bits (75), Expect = 0.086 Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 18/118 (15%) Query: 3 KREYSSTPLPLDYPK---QPEVGEETVPGVRVSLVRTMPSRC----HCHSPILP------ 49 K+ P P D P +P V + +R PS H P+LP Sbjct: 31 KKRMPEGPWPADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESV 90 Query: 50 --NPPSL--PPSLPTLIPPPFLLWGRFSHSHSQTPAPRIW-AQGPRSRDAGRGPAPKG 102 NP S P + L P P + R S S + R W GPR+ D RG PKG Sbjct: 91 RRNPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQCPKG 148 >gi|154146199 sal-like 3 [Homo sapiens] Length = 1300 Score = 33.5 bits (75), Expect = 0.086 Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 14/130 (10%) Query: 30 RVSLVRTMPSRCHCHSPILPNPPSLPPS-LPTLIPPPFLLWGRFSHSHSQTPAPRIWAQG 88 +V+L++ P R P+ P PS LP L P + PA I G Sbjct: 229 QVALMQRPPPRPSLSPAAAPSAPGPAPSQLPGLAALPL---------SAGAPAAAIAGSG 279 Query: 89 PRSRDAGRGPAPKGRGGRGSACCLPWGRSE--VPGTPVRVPAAAAREWAKREHACISKKP 146 P + A G P R G++ P G +E P P PA AA A + S +P Sbjct: 280 PAAPAAFEGAQPLSRPESGAST--PGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQP 337 Query: 147 ARSLDFPVFA 156 + P A Sbjct: 338 QSASTPPALA 347 >gi|169162422 PREDICTED: hypothetical protein [Homo sapiens] Length = 249 Score = 33.1 bits (74), Expect = 0.11 Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 25/133 (18%) Query: 25 TVP----GVRVSLVRTMPSRCH--CHSPI-----LPNPPSLPPSLPTLIPPPFLLWGRFS 73 TVP G +SL++++ SR C P + P L P L P L Sbjct: 30 TVPEYGCGESLSLLKSLCSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLK 89 Query: 74 HSHSQTP--------APRIWAQGPRSRDAGRGPAPKGRGGRGSA-CCLPWGRSEVPGTPV 124 + S+ P AP G R R R P P+ GRG+A CLP G+S V Sbjct: 90 YQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLP-GKSSHQERGV 148 Query: 125 RV----PAAAARE 133 V PA +AR+ Sbjct: 149 LVGCPSPALSARD 161 >gi|149158690 HLA-B associated transcript-2 [Homo sapiens] Length = 2157 Score = 33.1 bits (74), Expect = 0.11 Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 2/73 (2%) Query: 36 TMPSRCHCHSPILPNPPSLP-PSLPTLIPPPFLLWGRFSHSHSQTPAPRIWAQGPRSRD- 93 T P H P LP P P P PT P + G S H + P P + G RD Sbjct: 1491 TAPGGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDS 1550 Query: 94 AGRGPAPKGRGGR 106 AG P P R R Sbjct: 1551 AGVSPFPPKRRER 1563 >gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] Length = 134 Score = 32.7 bits (73), Expect = 0.15 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 16/85 (18%) Query: 52 PSLPPSLPTLI------------PPPFLLWGRFSHSH-SQTPAPRIWAQGPRSRDAGRGP 98 PSL S+P ++ P LW + H +TP+P+ AQG R RG Sbjct: 53 PSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHLDKTPSPQKPAQGCRK---DRGA 109 Query: 99 APKGRGGRGSACCLPWGRSEVPGTP 123 + G+ G+GS C RS+ P P Sbjct: 110 SKTGKKGKGSKGCKRTERSQTPKGP 134 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.136 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,758,146 Number of Sequences: 37866 Number of extensions: 648468 Number of successful extensions: 4460 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 243 Number of HSP's that attempted gapping in prelim test: 3869 Number of HSP's gapped (non-prelim): 782 length of query: 166 length of database: 18,247,518 effective HSP length: 95 effective length of query: 71 effective length of database: 14,650,248 effective search space: 1040167608 effective search space used: 1040167608 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.