Guide to the Human Genome
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Name: INVS Sequence: fasta or formatted (895aa) NCBI GI: 34304379
Description:

inversin isoform b

Referenced in:

Ankyrin Family
Kidney
Left-Right Axis

Other entries for this name:
alt prot [1065aa] inversin isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         86           3
 C cysteine            1.7         15           1
 D aspartate           5.7         51           2
 E glutamate           4.9         44           3
 F phenylalanine       2.1         19           1
 G glycine             6.1         55           2
 H histidine           4.4         39           2
 I isoleucine          3.4         30           2
 K lysine              7.5         67           2
 L leucine            10.7         96           3
 M methionine          1.9         17           1
 N asparagine          5.3         47           2
 P proline             4.6         41           2
 Q glutamine           5.3         47           2
 R arginine            6.3         56           3
 S serine              7.4         66           2
 T threonine           4.6         41           2
 V valine              5.3         47           2
 W tryptophan          1.2         11           1
 Y tyrosine            2.2         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inversin isoform b 
INVS                  0.812   inversin isoform a 
ANKRD44               0.106   ankyrin repeat domain 44 
ANKRD50               0.102   ankyrin repeat domain 50 
ANKRD52               0.099   ankyrin repeat domain 52 
ANK1                  0.097   ankyrin 1 isoform 9 
ANK1                  0.097   ankyrin 1 isoform 1 
ANK1                  0.097   ankyrin 1 isoform 3 
ANK1                  0.097   ankyrin 1 isoform 2 
ANK1                  0.097   ankyrin 1 isoform 4 
ANKRD28               0.096   ankyrin repeat domain 28 
ANK2                  0.094   ankyrin 2 isoform 3 
ANK2                  0.094   ankyrin 2 isoform 2 
ANK2                  0.094   ankyrin 2 isoform 1 
ANK3                  0.094   ankyrin 3 isoform 1 
ANKK1                 0.072   ankyrin repeat and kinase domain containing 1 
TNKS                  0.069   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD55               0.069   ankyrin repeat domain 55 isoform 1 
TNKS2                 0.066   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
KIDINS220             0.064   kinase D-interacting substrate of 220 kDa 
RIPK4                 0.062   ankyrin repeat domain 3 
ANKRD17               0.062   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.062   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.059   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.059   ANKHD1-EIF4EBP3 protein 
DAPK1                 0.057   death-associated protein kinase 1 
LOC441869             0.055   hypothetical protein LOC441869 
TRPA1                 0.055   ankyrin-like protein 1 
ANKDD1A               0.053   ankyrin repeat and death domain containing 1A 
TANC2                 0.053   tetratricopeptide repeat, ankyrin repeat and coiled...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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