PDCD6IP 13961

Name: PDCD6IP	Sequence: fasta or formatted (868aa)		NCBI GI: 22027538
Description: programmed cell death 6 interacting protein isoform 1		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Rho and Rac ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [873aa] programmed cell death 6 interacting protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 89 3 C cysteine 1.3 11 1 D aspartate 5.1 44 1 E glutamate 6.8 59 3 F phenylalanine 3.5 30 2 G glycine 4.5 39 2 H histidine 1.3 11 1 I isoleucine 4.0 35 2 K lysine 7.3 63 2 L leucine 9.6 83 2 M methionine 1.6 14 1 N asparagine 4.3 37 2 P proline 8.4 73 4 Q glutamine 6.9 60 2 R arginine 3.9 34 2 S serine 6.5 56 2 T threonine 5.2 45 2 V valine 5.8 50 2 W tryptophan 0.2 2 1 Y tyrosine 3.8 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 programmed cell death 6 interacting protein isoform ... PDCD6IP 0.996 programmed cell death 6 interacting protein isoform... PTPN23 0.137 protein tyrosine phosphatase, non-receptor type 23 [... LOC731884 0.124 PREDICTED: similar to programmed cell death 6 inter... RHPN1 0.042 rhophilin 1 RHPN2 0.039 rhophilin, Rho GTPase binding protein 2 DIAPH1 0.029 diaphanous 1 isoform 2 DIAPH1 0.029 diaphanous 1 isoform 1 CPSF6 0.026 cleavage and polyadenylation specific factor 6, 68 ... WBP11 0.025 WW domain binding protein 11 SF3A2 0.025 splicing factor 3a, subunit 2 SFPQ 0.025 splicing factor proline/glutamine rich (polypyrimidin... RERE 0.025 atrophin-1 like protein isoform b RERE 0.025 atrophin-1 like protein isoform a RERE 0.025 atrophin-1 like protein isoform a SF3B4 0.025 splicing factor 3b, subunit 4 SAMD1 0.024 sterile alpha motif domain containing 1 FMN2 0.024 formin 2 MAPK1IP1L 0.023 MAPK-interacting and spindle-stabilizing protein [Ho... RAPH1 0.023 Ras association and pleckstrin homology domains 1 is... FLJ22184 0.023 PREDICTED: hypothetical protein FLJ22184 SETD1B 0.023 SET domain containing 1B NACA 0.023 nascent polypeptide-associated complex alpha subuni... SYNJ1 0.022 synaptojanin 1 isoform d PCLO 0.022 piccolo isoform 2 PCLO 0.022 piccolo isoform 1 FMN1 0.022 formin 1 WASL 0.022 Wiskott-Aldrich syndrome gene-like protein WASF2 0.022 WAS protein family, member 2 BCORL1 0.022 BCL6 co-repressor-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.