Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239749704
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo
sapiens]
(80 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo ... 169 3e-43
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 40 5e-04
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 40 5e-04
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 40 5e-04
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 40 5e-04
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 40 5e-04
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi... 40 5e-04
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi... 40 5e-04
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi... 40 5e-04
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 39 7e-04
gi|148613878 acrosin precursor [Homo sapiens] 39 7e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 38 0.002
gi|157785645 SPEG complex locus [Homo sapiens] 38 0.002
gi|153792074 proline rich 12 [Homo sapiens] 38 0.002
gi|9945318 MAX binding protein [Homo sapiens] 38 0.002
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 37 0.003
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 37 0.003
gi|118572599 formin homology 2 domain containing 1 [Homo sapiens] 37 0.003
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 37 0.003
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|4507691 transformation/transcription domain-associated protei... 37 0.003
gi|23397672 homeobox D4 [Homo sapiens] 36 0.006
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens] 36 0.006
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens] 36 0.006
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 36 0.006
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.008
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.008
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 36 0.008
gi|239757091 PREDICTED: hypothetical protein [Homo sapiens] 36 0.008
gi|239751597 PREDICTED: hypothetical protein XP_002347925 [Homo ... 36 0.008
>gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo
sapiens]
Length = 80
Score = 169 bits (429), Expect = 3e-43
Identities = 80/80 (100%), Positives = 80/80 (100%)
Query: 1 MDNAAFFSRSQLELEARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNP 60
MDNAAFFSRSQLELEARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNP
Sbjct: 1 MDNAAFFSRSQLELEARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNP 60
Query: 61 APPPRPIPRAATPLTPRPRN 80
APPPRPIPRAATPLTPRPRN
Sbjct: 61 APPPRPIPRAATPLTPRPRN 80
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1742 PSACPLPPPPPISPPSPPPAPAPLAPPP 1769
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1779 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1831
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1768 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1822
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1411 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1445
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1738 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1769
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1739 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1792
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1719 PSACPLPPPPPISPPSPPPAPAPLAPPP 1746
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1756 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1808
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1745 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1799
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1386 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1420
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1715 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1746
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1716 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1769
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1722 PSACPLPPPPPISPPSPPPAPAPLAPPP 1749
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1759 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1811
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1748 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1802
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1389 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1423
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1718 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1749
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1719 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1772
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1702 PSACPLPPPPPISPPSPPPAPAPLAPPP 1729
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1739 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1791
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1728 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1782
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1371 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1405
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1698 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1729
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1699 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1752
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1739 PSACPLPPPPPISPPSPPPAPAPLAPPP 1766
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1776 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1828
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1765 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1819
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1408 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1442
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1735 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1766
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1736 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1789
>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1673 PSACPLPPPPPISPPSPPPAPAPLAPPP 1700
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1710 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1762
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1699 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1753
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1340 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1374
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1669 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1700
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1670 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1723
>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1744 PSACPLPPPPPISPPSPPPAPAPLAPPP 1771
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1781 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1833
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1770 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1824
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1411 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1445
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1740 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1771
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1741 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1794
>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATP 73
P+ PLP PP+S P+PPP P P A P
Sbjct: 1749 PSACPLPPPPPISPPSPPPAPAPLAPPP 1776
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 32 PPASARTLRTHLRLPAGAPL------PSTPPVSNPAPPPRPIPRAATPLTPRP 78
PP S ++ L P PL P TPP+ P P P P P + P P P
Sbjct: 1786 PPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1838
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPP------VSNPAPPPRP-IPRAATPLTPRP 78
PP S +L P PLP PP VS PP P +P TPL P P
Sbjct: 1775 PPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPP 1829
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 37 RTLRTHLRLPAGAP-LPSTPPVSNPAPPPRPIPRAA 71
+T R LPA P +P+ PV+ P PPP P P A
Sbjct: 1416 KTARIQAALPAAKPAVPAPAPVAAPPPPP-PPPPGA 1450
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 52 PSTPPVSNPAPPPRPI-----PRAATPLTPRP 78
P+ P + P PPP PI P A PL P P
Sbjct: 1745 PNISPSACPLPPPPPISPPSPPPAPAPLAPPP 1776
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 21 NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTP 76
N P C PPP + P AP P P S PPP P P PL P
Sbjct: 1746 NISPSACPLPPPPPISPPSPPPAPAPL-APPPDISPFSLFCPPPSP-PSIPLPLPP 1799
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 39.3 bits (90), Expect = 7e-04
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 30 RPPPAS---ARTLRTHLRL---PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
RPPP + L HL P PLP PP + P PPP P P P +P P
Sbjct: 242 RPPPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPPSPLP 296
Score = 32.7 bits (73), Expect = 0.064
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 10/54 (18%)
Query: 24 PRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSN---PAPPPRPIPRAATPL 74
PR RPP A R P P P PP S P PPP P P + T L
Sbjct: 266 PRPLPPRPPAAQPRP-------PPSPPPPPPPPPSPLPPPPPPPPPTPSSTTKL 312
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 39.3 bits (90), Expect = 7e-04
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 30 RPPPAS---ARTLRTHLRL---PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
RPPP + + HL P PLP PP + P PPP P P P +P P
Sbjct: 308 RPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASPLP 362
Score = 33.5 bits (75), Expect = 0.038
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 10/54 (18%)
Query: 24 PRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSN---PAPPPRPIPRAATPL 74
PR RPP A R P P P PP S P PPP P P + T L
Sbjct: 332 PRPLPPRPPAAQPRP-------PPSPPPPPPPPASPLPPPPPPPPPTPSSTTKL 378
Score = 30.8 bits (68), Expect = 0.24
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 44 RLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
R PA P P P P PP P+P P P P
Sbjct: 338 RPPAAQPRPPPSPPPPPPPPASPLPPPPPPPPPTP 372
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/61 (34%), Positives = 24/61 (39%)
Query: 18 PALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPR 77
P L P P T+ T L+ P P P PP P PPP P P +A P
Sbjct: 1965 PPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQL 2024
Query: 78 P 78
P
Sbjct: 2025 P 2025
Score = 28.5 bits (62), Expect = 1.2
Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 20/88 (22%)
Query: 6 FFSRSQLELEARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPP--------- 56
FF + LE AR + R ++ P S + T P PLP PP
Sbjct: 1927 FFPYAALEKFAR-----QYREAYDKLYPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVK 1981
Query: 57 ----VSNP--APPPRPIPRAATPLTPRP 78
VS P APPP P P P P P
Sbjct: 1982 IPNTVSTPLQAPPPTPPPPPPPPPPPPP 2009
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 15 EARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTP-PVSNPAPPPRPIPRAATP 73
EA+P+ RP P P++ ++ P+ AP P P P + AP PRP P A+
Sbjct: 2172 EAQPSSPARP----SAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASK 2227
Query: 74 LTPRPR 79
P P+
Sbjct: 2228 PAPPPQ 2233
Score = 30.0 bits (66), Expect = 0.42
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 13/68 (19%)
Query: 13 ELEARPAL-NQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAA 71
E + +P L ++ PR + PP SA LP P +P V +PP P AA
Sbjct: 283 EPDLQPQLASEAPRRPAQPPPSKSAL-------LP-----PPSPRVGKRSPPGPPAQPAA 330
Query: 72 TPLTPRPR 79
TP +P R
Sbjct: 331 TPTSPHRR 338
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
PPP A T + P PLP PP + P+PPP P P AA PL P
Sbjct: 1485 PPPLVAPTPSS----PPPPPLPPPPPPAMPSPPPPP-PPAAAPLAAPP 1527
Score = 33.9 bits (76), Expect = 0.029
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 18 PALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPR 77
PA +P+ PPP A LP+ PL + P S P PP P P A P P
Sbjct: 1463 PAPTPQPQPPPPPPPPQPA--------LPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 1514
Query: 78 P 78
P
Sbjct: 1515 P 1515
Score = 30.4 bits (67), Expect = 0.32
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 25 RNCGERPPPASAR-TLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
R G+ P SA + + PA P P TP + PP P A P P P
Sbjct: 1675 RRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAP 1729
Score = 30.0 bits (66), Expect = 0.42
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 16/60 (26%)
Query: 32 PPASARTLRTHLRLPA---GAPLPSTPPVSNPAPPPRPIP---------RAATPLTPRPR 79
P SA + HL PA GAP P PP P PPP P+P P P PR
Sbjct: 812 PSPSASKVGVHLLEPATRDGAPQPPPPP---PPPPP-PMPLQLEAHLRSHGLEPAAPSPR 867
Score = 29.6 bits (65), Expect = 0.54
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 50 PLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
P P+ PP P P P P P P P P
Sbjct: 1457 PPPTPPPAPTPQPQPPPPPPPPQPALPSP 1485
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 9/59 (15%)
Query: 29 ERPPPASARTLRTHLRLPAGAPLPSTPPVSNP---------APPPRPIPRAATPLTPRP 78
E PP + T P P P P + +P +PPP P+P P P P
Sbjct: 1454 EEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 1512
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 20/79 (25%)
Query: 14 LEARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSN-------------- 59
L+ P + + + PP A A + P PLP P ++
Sbjct: 1405 LDDPPLAGPKDTSTPDGPPLAPAAAV------PGPPPLPGLPSANSNGTPEPPLLEEKPP 1458
Query: 60 PAPPPRPIPRAATPLTPRP 78
P PPP P P+ P P P
Sbjct: 1459 PTPPPAPTPQPQPPPPPPP 1477
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRPR 79
PPPA L T L P+P P PPP P+P AA PL PR
Sbjct: 72 PPPAPPPPLATPAPLTV-IPIPVVTNSPQPLPPPPPLPAAAQPLPLAPR 119
Score = 32.0 bits (71), Expect = 0.11
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 22/82 (26%)
Query: 18 PALNQRPRNCGERPP-PASARTLRTHLRLPA-----------GAPLPSTPPVSNPAP--- 62
P + P+ PP PA+A+ L R PA APLPS P V PAP
Sbjct: 92 PVVTNSPQPLPPPPPLPAAAQPLPLAPRQPALVGAPGLSIKEPAPLPSRPQVPTPAPLLP 151
Query: 63 ------PPRPIPRAATPLTPRP 78
PP P+ PL P P
Sbjct: 152 DSKATIPPNGSPKPLQPL-PTP 172
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 45 LPAGAPLPSTPPV--SNPAPPPRPIPRAATP 73
LP P PP+ S PAPPP P P ATP
Sbjct: 53 LPVEEPRMEAPPLPLSPPAPPPAPPPPLATP 83
Score = 27.7 bits (60), Expect = 2.1
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 18 PALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPR 77
P+ P P P S HL + P TP PAPPP P A T L P
Sbjct: 371 PSTTPAPLPPHPHPHPHSVALPPAHLPVQQQQPQQKTPL---PAPPPPPAAPAQT-LVPA 426
Query: 78 P 78
P
Sbjct: 427 P 427
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 37.4 bits (85), Expect = 0.003
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 8/56 (14%)
Query: 24 PRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRPR 79
P N G PPPA R A P PS P + P PPP P A P P R
Sbjct: 294 PHNSGPPPPPARGRG--------APPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNR 341
Score = 30.4 bits (67), Expect = 0.32
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 10/49 (20%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRPR 79
PPP +R G P P PP N PPP P P P R
Sbjct: 278 PPPPPSR----------GGPPPPPPPPHNSGPPPPPARGRGAPPPPPSR 316
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 28 GERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRP 66
G PPP S L + AP P PP P PPP P
Sbjct: 357 GPPPPPPSV------LGVGPVAPPPPPPPPPPPGPPPPP 389
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 11/48 (22%)
Query: 31 PPPASARTLRTHLRLPAGAPLP-----STPPVSNPAPPPRPIPRAATP 73
PPPA + P+G P P PV+ P PPP P P P
Sbjct: 346 PPPALPSSA------PSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387
Score = 26.6 bits (57), Expect = 4.6
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 9/72 (12%)
Query: 16 ARPALNQRPRNCGERPPPASARTLRT------HLRLPAGAPLPSTPPVSNPAPPPRPI-- 67
A P R PPP S ++ + P LPS+ P P PPP +
Sbjct: 309 APPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGV 368
Query: 68 -PRAATPLTPRP 78
P A P P P
Sbjct: 369 GPVAPPPPPPPP 380
Score = 26.6 bits (57), Expect = 4.6
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPPVSN--------PAPPPRPIPRAATPLTP 76
PPP + LP+ AP PP + P PPP P P P P
Sbjct: 336 PPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPP 389
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 18 PALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPS-TPPVSNPAPPPRPIPRAATPLTP 76
P+ R GE+PPP SAR+ T L P G+P S P+ +P PR P TP
Sbjct: 479 PSRGPRGGGAGEQPPPPSARS--TPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTP 536
Query: 77 RP 78
P
Sbjct: 537 PP 538
>gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]
Length = 1164
Score = 37.4 bits (85), Expect = 0.003
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 33 PASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAA 71
PA + L +P PLP PP+ P PPP P+P AA
Sbjct: 570 PAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAA 608
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 25 RNCGERPPPASARTLRTHLRLPAGAPLPST----PPVSNPAPPPRPIPRAATPLTPR 77
RN PP T R P GAP + PP P PPP P+ AA PR
Sbjct: 94 RNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPR 150
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 16 ARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIP 68
A P P PPPA A LP P P PP PPP+P P
Sbjct: 185 AAPPAVAPPAGPRRAPPPAVAAR---EPPLPP-PPQPPAPPQQQQPPPPQPQP 233
Score = 26.6 bits (57), Expect = 4.6
Identities = 15/48 (31%), Positives = 18/48 (37%)
Query: 31 PPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
PPP + R P A +T P S P P + A PL P
Sbjct: 134 PPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP 181
Score = 25.8 bits (55), Expect = 7.8
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 30 RPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
+P P + R PA A P+ P + P P P A P P P
Sbjct: 166 QPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPP 214
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 16 ARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLT 75
A PA + RP C RP P A++ +PA +PS P ++PA RP R TP
Sbjct: 33 ATPARSPRPPLCAPRPAPGRAQS-----PVPAAGAVPSPPAAAHPA---RPALRGETPAP 84
Query: 76 PR 77
R
Sbjct: 85 GR 86
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 28 GERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRPR 79
G R P AR+ R L P AP + PV P P P AA P P R
Sbjct: 28 GTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSP-PAAAHPARPALR 78
>gi|4507691 transformation/transcription domain-associated protein
[Homo sapiens]
Length = 3830
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 47 AGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
A P PS PV P PPP P P ATP+TP P
Sbjct: 493 APGPAPSPAPVPAPPPPPPP-PPPATPVTPAP 523
Score = 25.8 bits (55), Expect = 7.8
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 10/53 (18%)
Query: 16 ARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIP 68
A P + P G P PA +PA P P PP + P P P+P
Sbjct: 483 ALPGVPTAPAAPGPAPSPAP---------VPAPPPPPPPPPPATPV-TPAPVP 525
>gi|23397672 homeobox D4 [Homo sapiens]
Length = 255
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 14 LEARPALNQRPRNCGERPPPASARTLRTHLRLPAGA----PLPSTPPVSNPAPPPRPIPR 69
L RP ++P G P P SA R H + P G P P + PAPPP P+P
Sbjct: 51 LYPRPDFGEQPFG-GSGPGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPPAPPPAPLPG 109
Query: 70 A 70
A
Sbjct: 110 A 110
>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 23 RPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPR---AATPLTPRPR 79
RP G+ PP+S+ R H +L + P S+ PPPRP+P+ AA PL+P R
Sbjct: 19 RPPQPGKARPPSSSGDQRRHPQL-SRPPRRDLTGGSDLGPPPRPVPQLPDAALPLSPELR 77
>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 23 RPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPR---AATPLTPRPR 79
RP G+ PP+S+ R H +L + P S+ PPPRP+P+ AA PL+P R
Sbjct: 19 RPPQPGKARPPSSSGDQRRHPQL-SRPPRRDLTGGSDLGPPPRPVPQLPDAALPLSPELR 77
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 29 ERPPPASARTL-RTHLRLPAGAPLPSTPPVSNPAPP----PRPIPRAATPLTP 76
+ P P SA TL + P AP+P++ P + PAPP P P P + P TP
Sbjct: 318 QAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTP 370
Score = 31.2 bits (69), Expect = 0.19
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 45 LPAGAPLPSTPPVSNPAPPPRPIPRAATPL 74
+PA AP P+S PAP P +P +A PL
Sbjct: 285 VPASAPPSGPVPLSAPAPAPLSVPVSAPPL 314
Score = 28.9 bits (63), Expect = 0.93
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 45 LPAGAPLPSTPPVSNP------APPPRPIPRAATPLTPRP 78
+P P PS+ P S P AP P P P A TP P
Sbjct: 355 VPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAP 394
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 32 PPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPRPIPRAATP 73
PP++ + P AP P+ P+ PAP P P AATP
Sbjct: 366 PPSTPTLIPAFAPTPVPAPTPA--PIFTPAPTPMP---AATP 402
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 35.8 bits (81), Expect = 0.008
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
PA AP P+ PV+ PAP P P P A P P
Sbjct: 173 PAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAA 71
P AP P+ P PAP P P P AA
Sbjct: 183 PVAAPAPAPAPAPAPAPAPAPAPDAA 208
Score = 30.4 bits (67), Expect = 0.32
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 17/81 (20%)
Query: 15 EARPALNQRPRNCGERPPPASART---LRTHLRLPAGAPLPSTPPVSNP----------- 60
E+ L + P P PA A T + PA AP P PV+ P
Sbjct: 113 ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPA 172
Query: 61 ---APPPRPIPRAATPLTPRP 78
AP P P P AA P P
Sbjct: 173 PAPAPAPAPAPVAAPAPAPAP 193
Score = 30.0 bits (66), Expect = 0.42
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPR 77
PA AP+ + P PAP P P P A P+
Sbjct: 179 PAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 47 AGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
A AP P+ P PAP P P A P P
Sbjct: 168 APAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 199
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 35.8 bits (81), Expect = 0.008
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
PA AP P+ PV+ PAP P P P A P P
Sbjct: 173 PAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAA 71
P AP P+ P PAP P P P AA
Sbjct: 183 PVAAPAPAPAPAPAPAPAPAPAPDAA 208
Score = 30.4 bits (67), Expect = 0.32
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 17/81 (20%)
Query: 15 EARPALNQRPRNCGERPPPASART---LRTHLRLPAGAPLPSTPPVSNP----------- 60
E+ L + P P PA A T + PA AP P PV+ P
Sbjct: 113 ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPA 172
Query: 61 ---APPPRPIPRAATPLTPRP 78
AP P P P AA P P
Sbjct: 173 PAPAPAPAPAPVAAPAPAPAP 193
Score = 30.0 bits (66), Expect = 0.42
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPR 77
PA AP+ + P PAP P P P A P+
Sbjct: 179 PAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 47 AGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
A AP P+ P PAP P P A P P
Sbjct: 168 APAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 199
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 35.8 bits (81), Expect = 0.008
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
PA AP P+ PV+ PAP P P P A P P
Sbjct: 184 PAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 216
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAA 71
P AP P+ P PAP P P P AA
Sbjct: 194 PVAAPAPAPAPAPAPAPAPAPAPDAA 219
Score = 30.4 bits (67), Expect = 0.32
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 17/81 (20%)
Query: 15 EARPALNQRPRNCGERPPPASART---LRTHLRLPAGAPLPSTPPVSNP----------- 60
E+ L + P P PA A T + PA AP P PV+ P
Sbjct: 124 ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPA 183
Query: 61 ---APPPRPIPRAATPLTPRP 78
AP P P P AA P P
Sbjct: 184 PAPAPAPAPAPVAAPAPAPAP 204
Score = 30.0 bits (66), Expect = 0.42
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 46 PAGAPLPSTPPVSNPAPPPRPIPRAATPLTPR 77
PA AP+ + P PAP P P P A P+
Sbjct: 190 PAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 221
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 47 AGAPLPSTPPVSNPAPPPRPIPRAATPLTPRP 78
A AP P+ P PAP P P A P P
Sbjct: 179 APAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 210
>gi|239757091 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 10 SQLELEARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPR 65
S L ++ A + PR G+ PP A+ T R H R G L P V P P R
Sbjct: 37 SSLHIKCMEAASLLPRPPGKAPPGAAKSTSRVHCRAAEGGGLRPVPAVPLPGPAGR 92
>gi|239751597 PREDICTED: hypothetical protein XP_002347925 [Homo
sapiens]
Length = 194
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 10 SQLELEARPALNQRPRNCGERPPPASARTLRTHLRLPAGAPLPSTPPVSNPAPPPR 65
S L ++ A + PR G+ PP A+ T R H R G L P V P P R
Sbjct: 37 SSLHIKCMEAASLLPRPPGKAPPGAAKSTSRVHCRAAEGGGLRPVPAVPLPGPAGR 92
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,367,336
Number of Sequences: 37866
Number of extensions: 400069
Number of successful extensions: 11850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 687
Number of HSP's that attempted gapping in prelim test: 5445
Number of HSP's gapped (non-prelim): 5105
length of query: 80
length of database: 18,247,518
effective HSP length: 52
effective length of query: 28
effective length of database: 16,278,486
effective search space: 455797608
effective search space used: 455797608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.