Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FHOD1 Sequence: fasta or formatted (1164aa) NCBI GI: 118572599
Description:

formin homology 2 domain containing 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5        111           3
 C cysteine            1.3         15           1
 D aspartate           4.6         53           2
 E glutamate           7.7         90           3
 F phenylalanine       2.7         32           1
 G glycine             6.6         77           3
 H histidine           1.6         19           2
 I isoleucine          2.9         34           1
 K lysine              4.0         46           2
 L leucine            12.6        147           3
 M methionine          1.7         20           2
 N asparagine          2.4         28           2
 P proline             8.8        103           5
 Q glutamine           3.7         43           4
 R arginine            7.3         85           2
 S serine              8.6        100           3
 T threonine           5.4         63           2
 V valine              6.1         71           2
 W tryptophan          0.6          7           1
 Y tyrosine            1.7         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   formin homology 2 domain containing 1 
FHOD3                 0.264   formin homology 2 domain containing 3 
DIAPH3                0.050   diaphanous homolog 3 isoform b 
DIAPH3                0.050   diaphanous homolog 3 isoform a 
DIAPH1                0.048   diaphanous 1 isoform 2 
DIAPH1                0.048   diaphanous 1 isoform 1 
DAAM2                 0.046   dishevelled associated activator of morphogenesis 2 ...
FMNL1                 0.041   formin-like 1 
DAAM1                 0.040   dishevelled-associated activator of morphogenesis 1 ...
DIAPH2                0.038   diaphanous 2 isoform 12C 
DIAPH2                0.038   diaphanous 2 isoform 156 
FMN1                  0.038   formin 1 
FMNL2                 0.037   formin-like 2 
FMNL3                 0.036   formin-like 3 isoform 2 
FMNL3                 0.036   formin-like 3 isoform 1 
FMN2                  0.034   formin 2 
INF2                  0.033   inverted formin 2 isoform 2 
INF2                  0.033   inverted formin 2 isoform 1 
GRID2IP               0.027   glutamate receptor, ionotropic, delta 2 (Grid2) int...
FHDC1                 0.026   FH2 domain containing 1 
PRR12                 0.022   proline rich 12 
C6orf132              0.015   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.015   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.015   PREDICTED: hypothetical protein LOC647024 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
ASXL3                 0.015   additional sex combs like 3 
ENAH                  0.015   enabled homolog isoform a 
ENAH                  0.015   enabled homolog isoform b 
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press