HOXD4 15941

Name: HOXD4	Sequence: fasta or formatted (255aa)		NCBI GI: 23397672
Description: homeobox D4		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 18 2 C cysteine 1.6 4 1 D aspartate 3.1 8 1 E glutamate 4.7 12 2 F phenylalanine 2.7 7 1 G glycine 10.6 27 3 H histidine 3.5 9 2 I isoleucine 1.6 4 1 K lysine 5.9 15 2 L leucine 5.9 15 1 M methionine 2.4 6 1 N asparagine 2.7 7 1 P proline 12.9 33 3 Q glutamine 5.9 15 2 R arginine 5.9 15 4 S serine 9.4 24 9 T threonine 3.9 10 2 V valine 3.9 10 2 W tryptophan 1.2 3 1 Y tyrosine 5.1 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox D4 HOXC4 0.453 homeobox C4 HOXC4 0.453 homeobox C4 HOXB4 0.434 homeobox B4 HOXA4 0.403 homeobox A4 HOXA5 0.240 homeobox A5 HOXC5 0.225 homeobox C5 HOXB5 0.221 homeobox B5 HOXB6 0.211 homeobox B6 HOXB7 0.207 homeobox B7 HOXA3 0.196 homeobox A3 isoform a HOXA3 0.196 homeobox A3 isoform a HOXA6 0.196 homeobox A6 HOXD3 0.192 homeobox D3 HOXA7 0.186 homeobox A7 HOXD8 0.186 homeobox D8 HOXC6 0.179 homeobox C6 isoform 2 HOXC6 0.179 homeobox C6 isoform 1 HOXB3 0.175 homeobox B3 HOXB2 0.165 homeobox B2 HOXB1 0.163 homeobox B1 PDX1 0.159 pancreatic and duodenal homeobox 1 HOXA3 0.148 homeobox A3 isoform b HOXB8 0.144 homeobox B8 CDX1 0.144 caudal type homeobox 1 HOXA2 0.142 homeobox A2 HOXA1 0.142 homeobox A1 isoform a HOXC8 0.140 homeobox C8 HOXD1 0.131 homeobox D1 HOXA10 0.127 homeobox A10 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.