Guide to the Human Genome
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Name: LOC645529 Sequence: fasta or formatted (355aa) NCBI GI: 169163027
Description:

PREDICTED: similar to Putative acrosin-like protease

Referenced in:

Serine Proteases
Testes and Sperm

Other entries for this name:
alt prot [299aa] PREDICTED: similar to ACR
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         27           3
 C cysteine            2.8         10           1
 D aspartate           3.4         12           1
 E glutamate           3.7         13           2
 F phenylalanine       1.4          5           1
 G glycine             7.0         25           2
 H histidine           1.4          5           1
 I isoleucine          3.1         11           1
 K lysine              3.1         11           1
 L leucine             7.9         28           2
 M methionine          2.3          8           1
 N asparagine          1.7          6           1
 P proline            16.9         60           9
 Q glutamine           4.8         17           2
 R arginine            6.8         24           2
 S serine              8.7         31           2
 T threonine           6.8         24           2
 V valine              5.9         21           3
 W tryptophan          2.3          8           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Putative acrosin-like proteas... 
LOC645529             0.779   PREDICTED: similar to ACR 
ACR                   0.641   acrosin precursor 
HPN                   0.107   hepsin 
HPN                   0.107   hepsin 
TMPRSS11A             0.097   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.097   transmembrane protease, serine 11A isoform 1 
TMPRSS9               0.097   transmembrane protease, serine 9 
TMPRSS11F             0.096   transmembrane protease, serine 11F 
TMPRSS11E             0.093   transmembrane protease, serine 11E 
TMPRSS11E2            0.093   transmembrane protease, serine 11E2 
PLG                   0.093   plasminogen 
TMPRSS4               0.092   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.092   transmembrane protease, serine 4 isoform 1 
TMPRSS3               0.092   transmembrane protease, serine 3 isoform 1 
TMPRSS11B             0.089   transmembrane protease, serine 11B 
TMPRSS13              0.089   transmembrane protease, serine 13 
HABP2                 0.089   hyaluronan binding protein 2 preproprotein 
TMPRSS2               0.088   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.088   transmembrane protease, serine 2 isoform 2 
HGFAC                 0.088   HGF activator preproprotein 
TMPRSS5               0.088   transmembrane protease, serine 5 
TMPRSS11D             0.086   transmembrane protease, serine 11D 
F12                   0.084   coagulation factor XII precursor 
OVCH1                 0.084   ovochymase 1 
PRSS33                0.081   protease, serine, 33 
KLKB1                 0.080   plasma kallikrein B1 precursor 
F11                   0.078   coagulation factor XI precursor 
PRSS22                0.078   protease, serine, 22 
TMPRSS6               0.077   transmembrane protease, serine 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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