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Search of human proteins with 239747182
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747182 PREDICTED: hypothetical protein XP_002343934 [Homo
sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747182 PREDICTED: hypothetical protein XP_002343934 [Homo ... 280 2e-76
gi|89058402 PREDICTED: hypothetical protein [Homo sapiens] 280 2e-76
gi|89037235 PREDICTED: hypothetical protein [Homo sapiens] 277 1e-75
gi|169215684 PREDICTED: hypothetical protein [Homo sapiens] 263 3e-71
gi|47524184 hypothetical protein LOC29798 [Homo sapiens] 255 6e-69
gi|47551356 hypothetical protein LOC408029 [Homo sapiens] 237 2e-63
gi|23957680 ral guanine nucleotide dissociation stimulator-like ... 58 2e-09
gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens] 48 3e-06
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 44 5e-05
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 44 5e-05
gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens] 37 0.003
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 36 0.008
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 36 0.010
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 35 0.013
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 35 0.017
gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 35 0.017
gi|239757690 PREDICTED: hypothetical protein [Homo sapiens] 35 0.022
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.022
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.022
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 35 0.022
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 34 0.037
gi|163965366 nascent polypeptide-associated complex alpha subuni... 34 0.037
gi|8922785 hypothetical protein LOC55267 [Homo sapiens] 33 0.049
gi|31377585 spermatogenesis associated 2-like [Homo sapiens] 33 0.064
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.083
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.083
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 33 0.083
gi|52426748 cholinergic receptor, muscarinic 4 [Homo sapiens] 32 0.11
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 32 0.11
gi|66932943 variable charge, X chromosome [Homo sapiens] 32 0.11
>gi|239747182 PREDICTED: hypothetical protein XP_002343934 [Homo
sapiens]
Length = 130
Score = 280 bits (717), Expect = 2e-76
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ
Sbjct: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
GCATWAPLPH
Sbjct: 121 GCATWAPLPH 130
>gi|89058402 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 280 bits (717), Expect = 2e-76
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ
Sbjct: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
GCATWAPLPH
Sbjct: 121 GCATWAPLPH 130
>gi|89037235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 277 bits (709), Expect = 1e-75
Identities = 129/130 (99%), Positives = 129/130 (99%)
Query: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSA ASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ
Sbjct: 1 MTVKWKQLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
GCATWAPLPH
Sbjct: 121 GCATWAPLPH 130
>gi|169215684 PREDICTED: hypothetical protein [Homo sapiens]
Length = 283
Score = 263 bits (672), Expect = 3e-71
Identities = 122/124 (98%), Positives = 122/124 (98%)
Query: 7 QLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 66
Q APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP
Sbjct: 74 QAHAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 133
Query: 67 DFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWA 126
DFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWA
Sbjct: 134 DFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWA 193
Query: 127 PLPH 130
PLPH
Sbjct: 194 PLPH 197
>gi|47524184 hypothetical protein LOC29798 [Homo sapiens]
Length = 203
Score = 255 bits (652), Expect = 6e-69
Identities = 121/130 (93%), Positives = 122/130 (93%)
Query: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSAPASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQ
Sbjct: 1 MTVKWKQLSAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
G A WAPLPH
Sbjct: 121 GFAIWAPLPH 130
>gi|47551356 hypothetical protein LOC408029 [Homo sapiens]
Length = 209
Score = 237 bits (604), Expect = 2e-63
Identities = 112/121 (92%), Positives = 113/121 (93%)
Query: 10 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFM 69
APASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQPSEELPDFM
Sbjct: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 75
Query: 70 APPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWAPLP 129
APPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRPG A WAPLP
Sbjct: 76 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 135
Query: 130 H 130
H
Sbjct: 136 H 136
>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
[Homo sapiens]
Length = 473
Score = 58.2 bits (139), Expect = 2e-09
Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 27 PVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRASALEL 82
P PAPG PPGT LE + APE S C G+ ++QPSEELPD P PR A +L
Sbjct: 174 PAPAPGEGPPPGTVLEPQSAPESSCPCRGSVKNQPSEELPDMTTFP--PRLLAEQL 227
>gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens]
Length = 188
Score = 47.8 bits (112), Expect = 3e-06
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 7 QLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 66
Q AP AE++ P PA EP PA ++PP ALELE AP A+DQ +EELP
Sbjct: 85 QTLAPGPCAEVRALPAPAAEPEPA-WEEAPPERALELEGAP---------AKDQTNEELP 134
Query: 67 DFMAPP 72
+ P
Sbjct: 135 EITEVP 140
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 43.5 bits (101), Expect = 5e-05
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 10 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAP------EPSFCCPGTAQDQPSE 63
AP ++ P PA+E PAP D P LELE AP +PS+ P A++ SE
Sbjct: 318 APEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENGLSE 377
Query: 64 ELPDFMAPP 72
E P + P
Sbjct: 378 EKPHLLVFP 386
Score = 32.7 bits (73), Expect = 0.083
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVE 74
PVPA P P P PG+ LE+ AP P +P+ L AP +E
Sbjct: 285 PVPAPAPEPEPAPTPAPGSELEVAPAPAPEL----QQAPEPAVGLESAPAPALE 334
Score = 28.5 bits (62), Expect = 1.6
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
Query: 9 SAPASGAEIQLFPVPAVEPVP-------APGADSP-PGTALELEEAPEPSFCCPGTAQD- 59
S P L PVPA++P P A SP P A E E AP P+ PG+ +
Sbjct: 251 SEPIEAEPEALSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPA---PGSELEV 307
Query: 60 --QPSEELPDFMAPPV---EPRASALELK 83
P+ EL P V A ALEL+
Sbjct: 308 APAPAPELQQAPEPAVGLESAPAPALELE 336
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 43.5 bits (101), Expect = 5e-05
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 10 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAP------EPSFCCPGTAQDQPSE 63
AP ++ P PA+E PAP D P LELE AP +PS+ P A++ SE
Sbjct: 263 APEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENGLSE 322
Query: 64 ELPDFMAPP 72
E P + P
Sbjct: 323 EKPHLLVFP 331
Score = 32.7 bits (73), Expect = 0.083
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVE 74
PVPA P P P PG+ LE+ AP P +P+ L AP +E
Sbjct: 230 PVPAPAPEPEPAPTPAPGSELEVAPAPAPEL----QQAPEPAVGLESAPAPALE 279
Score = 28.5 bits (62), Expect = 1.6
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
Query: 9 SAPASGAEIQLFPVPAVEPVP-------APGADSP-PGTALELEEAPEPSFCCPGTAQD- 59
S P L PVPA++P P A SP P A E E AP P+ PG+ +
Sbjct: 196 SEPIEAEPEALSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPA---PGSELEV 252
Query: 60 --QPSEELPDFMAPPV---EPRASALELK 83
P+ EL P V A ALEL+
Sbjct: 253 APAPAPELQQAPEPAVGLESAPAPALELE 281
>gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]
Length = 1261
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 26 EPVPAPGADSPPGT-----ALELEEAPEP--SFCCPGTAQDQPSEELPDFMAPPVEPRAS 78
E +P A PPGT L ++ P+P + CPG A QP E+ + P V P
Sbjct: 1181 EKPASPSAAVPPGTDHDPHGLVVKSMPDPDKASACPGQATGQPKEDSEELGLPDVNPMCQ 1240
Query: 79 ALELKVWLELEVVE 92
LK + E +E
Sbjct: 1241 RPRLKRMQQFEDLE 1254
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 36.2 bits (82), Expect = 0.008
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 10 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQP-SEELPDF 68
APA+ A P PA P PAP A + P A A + PG AQ P ++
Sbjct: 118 APAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPL 177
Query: 69 MAPPVEPRA 77
APP P A
Sbjct: 178 AAPPPAPAA 186
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 35.8 bits (81), Expect = 0.010
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 11 PASGAEIQLFPVPAVEPVPAPGADSPPGTALE--LEEAPEPSFCCPGTAQDQPSEELPDF 68
PA+ + P PA EP P P + P A E E APEP+ + +P+ EL
Sbjct: 85 PATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPE 144
Query: 69 MAPPVEP 75
+AP + P
Sbjct: 145 VAPELAP 151
Score = 35.0 bits (79), Expect = 0.017
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 11 PASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMA 70
PA+ + + P PA+E VP P + P A EL APEP+ +P EL
Sbjct: 117 PATESAPEPTPEPALESVPEPAPELTPEVAPEL--APEPT--------PEPVTELAPEFC 166
Query: 71 PPVEP--RASALELKVWLELEVVERGDQHS---SSQKLPHCSQSWAQWK 114
P P R S + ++ ERG + S S P SW++ K
Sbjct: 167 PEAAPEFRPSPAPCLLQCPVDTRERGLKTSPSPSPSPSPRTPMSWSRIK 215
Score = 30.0 bits (66), Expect = 0.54
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 10/55 (18%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP 75
P P + P P P A S T L E PEP A + SE P+ P EP
Sbjct: 57 PCPELAPGPCPEATSESATELYTEPTPEP-------ATEPASEPAPE---PATEP 101
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 35.4 bits (80), Expect = 0.013
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 7 QLSAPASGAEIQLFPVPA------VEPVPAPGADS----PPGTALELEEAPEPSFCCPGT 56
+ SA + AE+Q P PA V+P PA A + PP E P P+ P
Sbjct: 600 EASAEEAPAEVQ--PPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAE 657
Query: 57 AQDQPSEELPDFMAPPVEPRASA 79
Q P+EE P + PP A A
Sbjct: 658 VQPPPAEEAPAEVQPPPAEEAPA 680
Score = 33.9 bits (76), Expect = 0.037
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 6 KQLSAPASGAEIQLFPVPAVEPVPAPG-ADSPPGTALELEEAPEPSFCCPGTAQDQPSEE 64
++ +A + A IQL AP PP E P P+ P Q P+EE
Sbjct: 582 EETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEE 641
Query: 65 LPDFMAPPVEPRASA 79
P + PP A A
Sbjct: 642 APAEVQPPPAEEAPA 656
Score = 31.2 bits (69), Expect = 0.24
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Query: 11 PASGAEIQLFPVPA------VEPVPAPGADS----PPGTALELEEAPEPSFCCPGTAQDQ 60
PA A ++ P PA V+P PA A + PP E P P+ P Q
Sbjct: 626 PAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQSL 685
Query: 61 PSEELP 66
P+EE P
Sbjct: 686 PAEETP 691
Score = 30.8 bits (68), Expect = 0.32
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 17 IQLFPVPAVEP--VPAPGADSPPGTALELEEAPEPSFCC---PGTAQDQPSEELPDFMAP 71
+++ P PA E V P PP EE+P P +A++ PSEE P + P
Sbjct: 314 VKVQPPPAEEAPLVEFPAEIQPPSA----EESPSVELLAEILPPSAEESPSEEPPAEILP 369
Query: 72 PVEPRASALEL 82
P ++ ++EL
Sbjct: 370 PPAEKSPSVEL 380
Score = 26.9 bits (58), Expect = 4.6
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 9 SAPASGAEIQLFPVPAVEPVPAPGADSPPGTALEL---------EEAP--EPSFCCPGTA 57
S A A I++ P+PA + A P T E EEAP E TA
Sbjct: 386 SPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEAPREEARELQLSTA 445
Query: 58 QDQPSEELPDFMAPPVEPRASALELKVWLEL 88
+ P+EE P P+ +A E ++L
Sbjct: 446 METPAEEAPTEFQSPLPKETTAEEASAEIQL 476
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 35.0 bits (79), Expect = 0.017
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 12 ASGAEIQLFPVPAVEPVPAPGA---DSPPGTALELEEAPEPSFCCPGTAQ--DQPSEELP 66
A+ AE QL +V P P A +PPG L P P F P T + PS +LP
Sbjct: 160 AAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLP 219
Query: 67 DFMA-----------PPVEPRASALELKVWLELEVVERGDQHSSSQ 101
+ PPV PR L + L + ERG + S++
Sbjct: 220 PPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTR 265
>gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain
1 isoform c [Homo sapiens]
Length = 1450
Score = 35.0 bits (79), Expect = 0.017
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRASAL 80
PVPA P P P G P S C P T PS PD + PP+ +
Sbjct: 93 PVPATPPEPLPTTTEDEGLPAAPPIPPRRS-CLPPTCFTTPSTAAPDPVLPPLPAKRHLA 151
Query: 81 ELKV 84
EL V
Sbjct: 152 ELSV 155
>gi|239757690 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 34.7 bits (78), Expect = 0.022
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 63 EELPDFMAPPVEPRASALELKVWLE-LEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPG 121
E LP P + RA A +L V L LE V+ Q + P CS W +W+ Q PG
Sbjct: 63 ERLPGHSVPLLPVRAQAEDLPVGLSCLEPVQPIPQFTLLVGSPRCSCPWTEWQAILQAPG 122
Query: 122 CAT 124
T
Sbjct: 123 HLT 125
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 34.7 bits (78), Expect = 0.022
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 11 PASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFC----------CPGTAQDQ 60
PA G + P P+P+P + +PP L LE P PS P
Sbjct: 146 PAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSS 205
Query: 61 PSEELPDFMAPPVEPRA 77
PS P PP P A
Sbjct: 206 PSIPTPPDFIPPAPPLA 222
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 34.7 bits (78), Expect = 0.022
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 11 PASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFC----------CPGTAQDQ 60
PA G + P P+P+P + +PP L LE P PS P
Sbjct: 146 PAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSS 205
Query: 61 PSEELPDFMAPPVEPRA 77
PS P PP P A
Sbjct: 206 PSIPTPPDFIPPAPPLA 222
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 34.7 bits (78), Expect = 0.022
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 11 PASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFC----------CPGTAQDQ 60
PA G + P P+P+P + +PP L LE P PS P
Sbjct: 146 PAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSS 205
Query: 61 PSEELPDFMAPPVEPRA 77
PS P PP P A
Sbjct: 206 PSIPTPPDFIPPAPPLA 222
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 33.9 bits (76), Expect = 0.037
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 10 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCP---GTAQDQPSEELP 66
AP+ + L P P +P PA + PP +L++AP+P P Q+QPS
Sbjct: 211 APSQSQQQPLQPTPPQQPPPA--SQQPPAPTSQLQQAPQPQQHQPHSHSQNQNQPS-PTQ 267
Query: 67 DFMAPPVEPRAS 78
+PP +P S
Sbjct: 268 QSSSPPQKPSQS 279
Score = 28.5 bits (62), Expect = 1.6
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 9/132 (6%)
Query: 1 MTVKWKQLSAPAS-GAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQD 59
MT+ + L A +S +++Q + + PP T + P+P+ P +Q
Sbjct: 162 MTLPLQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPST----NQHPQPAPQAPSQSQQ 217
Query: 60 QPSEELPDFMAPPV--EPRASALELKVWLELEVVERGDQHSSSQKLPH-CSQSWAQWKLW 116
QP + P PP +P A +L+ + + + HS +Q P QS + +
Sbjct: 218 QPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQ-QHQPHSHSQNQNQPSPTQQSSSPPQKP 276
Query: 117 RQRPGCATWAPL 128
Q PG +PL
Sbjct: 277 SQSPGHGLPSPL 288
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.9 bits (76), Expect = 0.037
Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 17/65 (26%)
Query: 20 FPVP---AVEPVPAPGADSPPGTALELEEAPE-PSFCCPGTAQDQPSEELPDFMAPPVEP 75
FP P A P+ P S GTAL L APE P+F LP+ + PP+ P
Sbjct: 67 FPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTF-------------LPNLIGPPISP 113
Query: 76 RASAL 80
A AL
Sbjct: 114 AALAL 118
Score = 28.9 bits (63), Expect = 1.2
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 10 APASGAEIQLFPVPAVEPVPAPGADSPPG-------TALELEEAPEPSFCCPGTAQDQPS 62
APA+ + + PAV P GA SP T+ +EAP P P + + P+
Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPA 1629
Query: 63 EELPDF--MAPPVEP 75
P +PPV P
Sbjct: 1630 TPAPKGTPTSPPVTP 1644
>gi|8922785 hypothetical protein LOC55267 [Homo sapiens]
Length = 138
Score = 33.5 bits (75), Expect = 0.049
Identities = 21/66 (31%), Positives = 25/66 (37%)
Query: 11 PASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMA 70
PAS P + P+PA SPP A P CP +A P+ F A
Sbjct: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWA 61
Query: 71 PPVEPR 76
P PR
Sbjct: 62 PGSWPR 67
>gi|31377585 spermatogenesis associated 2-like [Homo sapiens]
Length = 424
Score = 33.1 bits (74), Expect = 0.064
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 29 PAPGADSPPGTAL---ELEEAPEPSFCCPGTAQDQPSEELPDFMAPP-------VEPRAS 78
P+PG DSPP L E + G A + P+EELP +PP +EP S
Sbjct: 246 PSPGPDSPPAELAYRPPLWEQSAKLWGTGGRAWEPPAEELPQASSPPYGALEEGLEPEPS 305
Query: 79 ALELKVWLELEVVERGD 95
A + L E+ GD
Sbjct: 306 AFSF-LSLRRELSRPGD 321
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 32.7 bits (73), Expect = 0.083
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 8 LSAPASGAEIQLFPVPAVEPVPAPGADSPPGTAL-ELEEAPEPSFCCPGTAQDQPSEELP 66
L +P A P P + P+ P +PP AL L+ P P P + PS + P
Sbjct: 369 LGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAP 428
Query: 67 DFMA---------PPVEPRASA 79
+ +A PP P A
Sbjct: 429 NALAVHLLQAPFSPPPSPPVQA 450
Score = 28.1 bits (61), Expect = 2.1
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Query: 7 QLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 66
Q P + +QL P P P +PP L+ P P PG A PS LP
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAP---PALATPP-----LQALPSPPASFPGQAPFSPSASLP 551
Query: 67 DFMAPPVEPRASA 79
M+P P A
Sbjct: 552 --MSPLATPPPQA 562
Score = 27.3 bits (59), Expect = 3.5
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 17 IQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVE 74
+Q+ P P P +P A PP +AP P P P + P PP++
Sbjct: 479 LQVPPSPPASPPMSPSATPPP-------QAPPPLAAPPLQLAKPPPQAPPALATPPLQ 529
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 32.7 bits (73), Expect = 0.083
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 8 LSAPASGAEIQLFPVPAVEPVPAPGADSPPGTAL-ELEEAPEPSFCCPGTAQDQPSEELP 66
L +P A P P + P+ P +PP AL L+ P P P + PS + P
Sbjct: 330 LGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAP 389
Query: 67 DFMA---------PPVEPRASA 79
+ +A PP P A
Sbjct: 390 NALAVHLLQAPFSPPPSPPVQA 411
Score = 28.1 bits (61), Expect = 2.1
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Query: 7 QLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 66
Q P + +QL P P P +PP L+ P P PG A PS LP
Sbjct: 461 QAPPPLAAPPLQLAKPPPQAP---PALATPP-----LQALPSPPASFPGQAPFSPSASLP 512
Query: 67 DFMAPPVEPRASA 79
M+P P A
Sbjct: 513 --MSPLATPPPQA 523
Score = 27.3 bits (59), Expect = 3.5
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 17 IQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVE 74
+Q+ P P P +P A PP +AP P P P + P PP++
Sbjct: 440 LQVPPSPPASPPMSPSATPPP-------QAPPPLAAPPLQLAKPPPQAPPALATPPLQ 490
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 32.7 bits (73), Expect = 0.083
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 23 PAVEPVPAP-----GADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRA 77
PA EP PAP D PPG + E A P+ G++ DQP P A P P A
Sbjct: 1685 PASEPAPAPVEQLEQVDLPPGADPDKEAAMMPAGVEEGSSGDQP----PYLDAKPPTPGA 1740
Query: 78 S 78
S
Sbjct: 1741 S 1741
>gi|52426748 cholinergic receptor, muscarinic 4 [Homo sapiens]
Length = 479
Score = 32.3 bits (72), Expect = 0.11
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRASAL 80
P PA+ P P P AD A + + P T P APP++PRA
Sbjct: 276 PPPALPPPPRPVADKDTSNESSSGSATQNTKERPATELSTTEATTPAMPAPPLQPRALNP 335
Query: 81 ELKVWLELEVVER 93
+ W ++++V +
Sbjct: 336 ASR-WSKIQIVTK 347
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 32.3 bits (72), Expect = 0.11
Identities = 31/99 (31%), Positives = 34/99 (34%), Gaps = 25/99 (25%)
Query: 8 LSAPASGAEIQLFPVPAVEPVPA---------PGADSPPGTALELEEAPEPSFCCPGTA- 57
L P QL+P PA +P+PA PG PP L AP P A
Sbjct: 1007 LGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAP 1066
Query: 58 ----------QDQPSEELPDFMAP-----PVEPRASALE 81
Q PS L AP PV PR A E
Sbjct: 1067 LTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAE 1105
Score = 31.2 bits (69), Expect = 0.24
Identities = 31/95 (32%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 11 PASGAEIQLFPVPA-VEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFM 69
P G E + +P EP P A P T + P S P Q P EE P
Sbjct: 1509 PPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQ--PKEEPPVPE 1566
Query: 70 APPVEPRASALELKVWLELEVVE-----RGDQHSS 99
AP P +S+LEL L E RG Q S
Sbjct: 1567 APSSGPPSSSLELLASLTPEAFSLDSSLRGKQRMS 1601
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 32.3 bits (72), Expect = 0.11
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 39 TALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP 75
TA E E AP PG + DQPS+ELP PP EP
Sbjct: 63 TAPEAESAP----AAPGPS-DQPSQELPQHELPPEEP 94
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,520,479
Number of Sequences: 37866
Number of extensions: 440878
Number of successful extensions: 2706
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 2200
Number of HSP's gapped (non-prelim): 596
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.