Guide to the Human Genome
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Name: ARHGAP29 Sequence: fasta or formatted (1261aa) NCBI GI: 134304853
Description:

PTPL1-associated RhoGAP 1

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         72           2
 C cysteine            2.1         27           1
 D aspartate           5.0         63           2
 E glutamate           9.0        114           3
 F phenylalanine       4.0         51           2
 G glycine             4.0         51           2
 H histidine           2.1         27           1
 I isoleucine          4.9         62           2
 K lysine              8.4        106           3
 L leucine            10.6        134           3
 M methionine          2.1         27           1
 N asparagine          5.6         71           2
 P proline             5.1         64           2
 Q glutamine           4.8         60           2
 R arginine            4.8         61           2
 S serine              9.7        122           3
 T threonine           4.9         62           2
 V valine              5.0         63           2
 W tryptophan          0.6          7           1
 Y tyrosine            1.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PTPL1-associated RhoGAP 1 
HMHA1                 0.228   minor histocompatibility antigen HA-1 
GMIP                  0.183   GEM interacting protein 
CHN2                  0.038   beta chimerin isoform 2 
CHN2                  0.038   beta chimerin isoform 1 
CHN1                  0.036   chimerin (chimaerin) 1 isoform a 
CHN1                  0.036   chimerin (chimaerin) 1 isoform b 
ARHGAP12              0.034   Rho GTPase activating protein 12 
ARHGAP27              0.032   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.032   Rho GTPase activating protein 27 isoform a 
MYO9A                 0.032   myosin IXA 
MYO9B                 0.030   myosin IXB isoform 1 
ARHGAP15              0.030   ARHGAP15 
MYO9B                 0.029   myosin IXB isoform 2 
ABR                   0.029   active breakpoint cluster region-related  protein i...
ABR                   0.029   active breakpoint cluster region-related  protein is...
ABR                   0.029   active breakpoint cluster region-related  protein is...
ARHGAP21              0.029   Rho GTPase activating protein 21 
ARHGAP23              0.028   Rho GTPase activating protein 23 
ARHGAP10              0.028   Rho GTPase activating protein 10 
RACGAP1               0.028   Rac GTPase activating protein 1 
RACGAP1               0.028   Rac GTPase activating protein 1 
RACGAP1               0.028   Rac GTPase activating protein 1 
ARHGAP9               0.028   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.028   Rho GTPase activating protein 9 isoform 3 
ARHGAP30              0.027   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.027   Rho GTPase activating protein 30 isoform 1 
CDGAP                 0.027   Cdc42 GTPase-activating protein 
OPHN1                 0.027   oligophrenin 1 
BCR                   0.027   breakpoint cluster region isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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