Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CHRM4 Sequence: fasta or formatted (479aa) NCBI GI: 52426748
Description:

cholinergic receptor, muscarinic 4

Referenced in:

Acetylcholine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         50           3
 C cysteine            2.3         11           1
 D aspartate           1.7          8           1
 E glutamate           3.3         16           2
 F phenylalanine       4.4         21           1
 G glycine             3.8         18           1
 H histidine           1.0          5           1
 I isoleucine          5.8         28           2
 K lysine              5.2         25           2
 L leucine             9.0         43           3
 M methionine          2.7         13           1
 N asparagine          5.4         26           2
 P proline             7.3         35           4
 Q glutamine           3.1         15           1
 R arginine            5.6         27           2
 S serine              6.9         33           3
 T threonine           8.1         39           2
 V valine              8.8         42           2
 W tryptophan          1.9          9           1
 Y tyrosine            3.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cholinergic receptor, muscarinic 4 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM2                 0.532   cholinergic receptor, muscarinic 2 
CHRM5                 0.416   cholinergic receptor, muscarinic 5 
CHRM1                 0.401   cholinergic receptor, muscarinic 1 
CHRM3                 0.284   cholinergic receptor, muscarinic 3 
HRH3                  0.179   histamine receptor H3 
HRH1                  0.171   histamine receptor H1 
HRH1                  0.171   histamine receptor H1 
HRH1                  0.171   histamine receptor H1 
HRH1                  0.171   histamine receptor H1 
HTR1A                 0.156   5-hydroxytryptamine (serotonin) receptor 1A 
DRD2                  0.149   dopamine receptor D2 isoform short 
DRD2                  0.143   dopamine receptor D2 isoform long 
ADRA2C                0.132   alpha-2C-adrenergic receptor 
DRD4                  0.127   dopamine receptor D4 
ADRA2A                0.124   alpha-2A-adrenergic receptor 
ADRA2B                0.122   alpha-2B-adrenergic receptor 
DRD3                  0.120   dopamine receptor D3 isoform a 
HTR1B                 0.112   5-hydroxytryptamine (serotonin) receptor 1B 
ADRA1B                0.110   alpha-1B-adrenergic receptor 
ADRA1D                0.110   alpha-1D-adrenergic receptor 
ADRA1A                0.109   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.109   alpha-1A-adrenergic receptor isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press