Guide to the Human Genome
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Name: ARAP1 Sequence: fasta or formatted (1450aa) NCBI GI: 92091600
Description:

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform c

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [1205aa] ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform a
alt prot [1133aa] ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9        114           3
 C cysteine            2.0         29           2
 D aspartate           4.6         67           2
 E glutamate           9.0        130           3
 F phenylalanine       3.4         49           1
 G glycine             6.4         93           2
 H histidine           2.6         37           1
 I isoleucine          3.1         45           1
 K lysine              4.3         62           3
 L leucine            10.7        155           2
 M methionine          1.7         25           2
 N asparagine          2.1         30           2
 P proline             8.1        118           3
 Q glutamine           4.0         58           2
 R arginine            7.4        108           3
 S serine              7.0        101           3
 T threonine           5.1         74           3
 V valine              6.6         96           3
 W tryptophan          1.6         23           1
 Y tyrosine            2.5         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 
ARAP1                 0.824   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP1                 0.529   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP2                 0.281   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARAP3                 0.252   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
AGAP2                 0.027   centaurin, gamma 1 isoform PIKE-S 
ACAP3                 0.027   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
AGAP2                 0.026   centaurin, gamma 1 isoform PIKE-L 
ARHGAP23              0.026   Rho GTPase activating protein 23 
GRLF1                 0.025   glucocorticoid receptor DNA binding factor 1 
MYO9B                 0.025   myosin IXB isoform 2 
MYO9B                 0.025   myosin IXB isoform 1 
MYO9A                 0.025   myosin IXA 
ARHGAP27              0.024   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.024   Rho GTPase activating protein 27 isoform a 
ASAP2                 0.024   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.024   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
ASAP1                 0.024   development and differentiation enhancing factor 1 [...
ACAP2                 0.024   centaurin, beta 2 
ARHGAP22              0.024   Rho GTPase activating protein 2 
AGAP3                 0.023   centaurin, gamma 3 isoform a 
ARHGAP21              0.023   Rho GTPase activating protein 21 
ARHGAP15              0.023   ARHGAP15 
HMHA1                 0.023   minor histocompatibility antigen HA-1 
ARHGAP5               0.023   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.023   Rho GTPase activating protein 5 isoform b 
ASAP3                 0.023   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.023   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
FAM13A                0.023   family with sequence similarity 13, member A1 isofor...
ARHGAP26              0.022   GTPase regulator associated with the focal adhesion...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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