VCX 34664

Name: VCX	Sequence: fasta or formatted (206aa)		NCBI GI: 66932943
Description: variable charge, X chromosome		Referenced in: Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 16 2 C cysteine 0.0 0 0 D aspartate 1.5 3 1 E glutamate 21.4 44 2 F phenylalanine 0.0 0 0 G glycine 3.9 8 1 H histidine 1.0 2 1 I isoleucine 0.0 0 0 K lysine 6.8 14 3 L leucine 6.3 13 1 M methionine 1.9 4 1 N asparagine 0.0 0 0 P proline 13.6 28 2 Q glutamine 9.2 19 1 R arginine 2.9 6 2 S serine 15.0 31 3 T threonine 2.9 6 2 V valine 5.8 12 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 variable charge, X chromosome VCX3B 0.957 variable charge, X-linked 3B VCX3A 0.872 variable charge, X-linked 3A VCX2 0.593 variable charge, X-linked 2 VCY1B 0.511 variable charge, Y-linked 1B VCY 0.511 variable charge, Y-linked IVL 0.146 involucrin NEFH 0.093 neurofilament, heavy polypeptide 200kDa ACRC 0.088 ACRC protein PELP1 0.088 proline, glutamic acid and leucine rich protein 1 [... SELPLG 0.085 selectin P ligand TTN 0.077 titin isoform N2-A LOC100288229 0.077 PREDICTED: hypothetical protein XP_002343606 RP1L1 0.077 retinitis pigmentosa 1-like 1 KIAA0754 0.077 hypothetical protein LOC643314 TRIM44 0.077 DIPB protein IWS1 0.074 IWS1 homolog PCLO 0.074 piccolo isoform 2 PCLO 0.074 piccolo isoform 1 NEFM 0.072 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.072 neurofilament, medium polypeptide 150kDa isoform 2 ... MYST3 0.072 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.072 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.072 MYST histone acetyltransferase (monocytic leukemia)... LRRC37A3 0.069 leucine rich repeat containing 37, member A3 LOC100294335 0.069 PREDICTED: similar to c114 SLIT-like testicular pro... LOC100294335 0.069 PREDICTED: similar to c114 SLIT-like testicular pro... LRRC37A2 0.069 c114 SLIT-like testicular protein LRRC37A 0.069 leucine rich repeat containing 37A MAP7D1 0.066 MAP7 domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.