Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PTPN23 Sequence: fasta or formatted (1636aa) NCBI GI: 24308073
Description:

protein tyrosine phosphatase, non-receptor type 23

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death
Protein Tyrosine Phosphatases
Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5        155           4
 C cysteine            1.0         17           1
 D aspartate           4.3         70           2
 E glutamate           6.3        103           2
 F phenylalanine       2.5         41           1
 G glycine             5.6         92           3
 H histidine           3.1         51           2
 I isoleucine          2.6         42           2
 K lysine              4.5         73           3
 L leucine            11.1        182           2
 M methionine          2.3         37           2
 N asparagine          2.0         33           1
 P proline            13.0        212           4
 Q glutamine           6.6        108           2
 R arginine            5.3         86           2
 S serine              7.4        121           3
 T threonine           3.6         59           3
 V valine              6.2        101           2
 W tryptophan          0.6          9           1
 Y tyrosine            2.7         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, non-receptor type 23 [... 
PDCD6IP               0.071   programmed cell death 6 interacting protein isoform ...
PDCD6IP               0.070   programmed cell death 6 interacting protein isoform...
PTPN2                 0.039   protein tyrosine phosphatase, non-receptor type 2 iso...
PTPN2                 0.039   protein tyrosine phosphatase, non-receptor type 2 [H...
PTPN2                 0.039   protein tyrosine phosphatase, non-receptor type 2 is...
PTPN3                 0.036   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.036   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.036   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.036   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.036   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.036   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN4                 0.034   protein tyrosine phosphatase, non-receptor type 4 [Ho...
PTPN1                 0.034   protein tyrosine phosphatase, non-receptor type 1 [Ho...
PTPRH                 0.034   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.034   protein tyrosine phosphatase, receptor type, H isof...
PTPN9                 0.033   protein tyrosine phosphatase, non-receptor type 9 [Ho...
PTPN13                0.033   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.033   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.033   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.033   protein tyrosine phosphatase, non-receptor type 13 is...
RHPN1                 0.033   rhophilin 1 
PTPRA                 0.033   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.033   protein tyrosine phosphatase, receptor type, A isofor...
PTPRA                 0.033   protein tyrosine phosphatase, receptor type, A isofo...
PTPN12                0.033   protein tyrosine phosphatase, non-receptor type 12 ...
FMN2                  0.032   formin 2 
PTPRB                 0.032   protein tyrosine phosphatase, receptor type, B isof...
PTPRB                 0.032   protein tyrosine phosphatase, receptor type, B isof...
PTPRE                 0.032   protein tyrosine phosphatase, receptor type, E isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press