Search of human proteins with 117320543

Search of human proteins with 117320543

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|117320543 proline-rich protein 3 isoform b [Homo sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|117320543 proline-rich protein 3 isoform b [Homo sapiens]          379   e-106
gi|117320535 proline-rich protein 3 isoform a [Homo sapiens]          367   e-102
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s...    74   8e-14
gi|119829187 alpha 1 type XVII collagen [Homo sapiens]                 42   2e-04
gi|30794372 polybromo 1 isoform 1 [Homo sapiens]                       42   2e-04
gi|93102371 polybromo 1 isoform 2 [Homo sapiens]                       42   2e-04
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          42   3e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    42   3e-04
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]        40   0.001
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             39   0.002
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s...    39   0.002
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]                39   0.002
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]      39   0.002
gi|54607014 TBC1 domain family, member 25 [Homo sapiens]               39   0.003
gi|11386161 alpha 2 type IX collagen [Homo sapiens]                    39   0.003
gi|18959210 WIRE protein [Homo sapiens]                                39   0.003
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      38   0.004
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]            38   0.004
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ...    38   0.004
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]         38   0.004
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    38   0.005
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    38   0.005
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming...    38   0.005
gi|73476377 LBXCOR1 homolog [Homo sapiens]                             38   0.005
gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]    38   0.005
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    38   0.005
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    38   0.005
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]         38   0.005
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi...    37   0.008
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]        37   0.008

>gi|117320543 proline-rich protein 3 isoform b [Homo sapiens]
          Length = 167

 Score =  379 bits (973), Expect = e-106
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPW 60
           MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPW
Sbjct: 1   MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPW 60

Query: 61  GRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKN 120
           GRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKN
Sbjct: 61  GRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKN 120

Query: 121 TCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPPL 167
           TCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPPL
Sbjct: 121 TCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPPL 167


>gi|117320535 proline-rich protein 3 isoform a [Homo sapiens]
          Length = 188

 Score =  367 bits (941), Expect = e-102
 Identities = 167/188 (88%), Positives = 167/188 (88%), Gaps = 21/188 (11%)

Query: 1   MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPI---------------------ALHR 39
           MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPI                     ALHR
Sbjct: 1   MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIGPPSLLGPPPMANGKPGDPKSALHR 60

Query: 40  GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTR 99
           GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTR
Sbjct: 61  GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTR 120

Query: 100 GSFHKEQRNPRRLKSWSLIKNTCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYH 159
           GSFHKEQRNPRRLKSWSLIKNTCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYH
Sbjct: 121 GSFHKEQRNPRRLKSWSLIKNTCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYH 180

Query: 160 PGVNGPPL 167
           PGVNGPPL
Sbjct: 181 PGVNGPPL 188


>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
           sapiens]
          Length = 940

 Score = 73.6 bits (179), Expect = 8e-14
 Identities = 55/167 (32%), Positives = 63/167 (37%), Gaps = 46/167 (27%)

Query: 21  PEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGW 80
           P     G    GS    H GP G  G                G  R   GP  S  G G 
Sbjct: 799 PHEGPGGGISGGSGHRPHEGPGGGMG--------------AGGGHRPHEGPGGSMGGSG- 843

Query: 81  WGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNTCPPKDDPQVME-------- 132
                  P  GPGHGGP           P  +       +  PP  + +  +        
Sbjct: 844 ----GHRPHEGPGHGGP-------HGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGG 892

Query: 133 ------------DKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPPL 167
                       D S+RPVCRHF  KG+CRYE+ CAFYHPGVNGPPL
Sbjct: 893 HRGHDGGHSHGGDMSNRPVCRHFMMKGNCRYENNCAFYHPGVNGPPL 939



 Score = 47.4 bits (111), Expect = 6e-06
 Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 17/79 (21%)

Query: 32  GSPIALHRGPPGSRGPLIPPLLSLPPPPWGR-------------GPIRRGLGPRSSPY-- 76
           G P+    G PG  GP+ P LL  PPPP G              GP+R G GP   PY  
Sbjct: 648 GGPMPGPHGGPG--GPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHR 705

Query: 77  GRGWWGVNAEPPFPGPGHG 95
           GRG  G N  PP P P  G
Sbjct: 706 GRGGRGGNEPPPPPPPFRG 724



 Score = 35.8 bits (81), Expect = 0.018
 Identities = 38/111 (34%), Positives = 42/111 (37%), Gaps = 25/111 (22%)

Query: 18  PPLPER------EETGDEEDGSPIA---------LHRGPPGSRGPLIPPLLSLPPPPW-G 61
           PP P R      +  GD   G P+           HRG  G  G   PP    PPPP+ G
Sbjct: 669 PPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPP----PPPPFRG 724

Query: 62  RGPIRRGLGP---RSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNP 109
               R G GP   R  P G G  G     P  GPG GG    S H+    P
Sbjct: 725 ARGGRSGGGPPNGRGGP-GGGMVGGGGHRPHEGPG-GGMGNSSGHRPHEGP 773



 Score = 29.6 bits (65), Expect = 1.3
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 19/91 (20%)

Query: 6   KQNHHQPPTQQQPPLPER----------EETGDEEDGSPIALHRGPPGSRGPLIPPLLSL 55
           K++ H+P  +   P+P +          +ET   E   P      P G+ G  +PP+L+ 
Sbjct: 501 KESPHEPDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAGGSKLPPVLA- 559

Query: 56  PPPPWGRGPIRRGLGPRSSPYGRGWWGVNAE 86
                    +   +G    P G G  G+N +
Sbjct: 560 --------NLMGSMGAGKGPQGPGGGGINVQ 582


>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
          Length = 1497

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 37/96 (38%), Positives = 42/96 (43%), Gaps = 14/96 (14%)

Query: 12  PPTQQQPPLPEREETGDEEDGSP----IALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRR 67
           PP    PP P          G P    +   +GPPG  GP  PP  S+P PP  RGP   
Sbjct: 825 PPGAMGPPGPPGAPGPAGPAGLPGHQEVLNLQGPPGPPGPRGPPGPSIPGPPGPRGPPGE 884

Query: 68  GL-GPRSSPYGRGWWGVNAE-----PPFPGPGHGGP 97
           GL GP   P   G +  N+E     PP P PG  GP
Sbjct: 885 GLPGPPGPP---GSFLSNSETFLSGPPGP-PGPPGP 916



 Score = 32.0 bits (71), Expect = 0.25
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 38  HRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGL----GPRSSPYGRGWWGVNAEPPFPG 91
           H+GP G +G    P +  PP P G  P + GL    GP+  P   G  G+  EP  PG
Sbjct: 750 HQGPRGEQGLTGMPGIRGPPGPSG-DPGKPGLTGPQGPQGLPGTPGRPGIKGEPGAPG 806



 Score = 31.2 bits (69), Expect = 0.43
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 11  QPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGL- 69
           +P  + +P  P +  T +      +    GPPG+ GP  PP    P  P G    +  L 
Sbjct: 795 RPGIKGEPGAPGKIVTSEGSSMLTVPGPPGPPGAMGPPGPPGAPGPAGPAGLPGHQEVLN 854

Query: 70  --GPRSSPYGRGWWGVNAEPPFPG-PGHGGP 97
             GP   P  RG  G    P  PG PG  GP
Sbjct: 855 LQGPPGPPGPRGPPG----PSIPGPPGPRGP 881



 Score = 30.8 bits (68), Expect = 0.56
 Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 40  GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGP 97
           GPPG  GP  P     PP P G     +GL P  S  G   +G+N + P   PG  GP
Sbjct: 906 GPPGPPGPPGPKGDQGPPGPRGHQG-EQGL-PGFSTSGSSSFGLNLQGPPGPPGPQGP 961


>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
          Length = 1602

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 10/76 (13%)

Query: 32   GSPIALHRG--PPGSRGPLIPPLLSLPPPP---WGRGPIRRGLGPRSSPYGR-----GWW 81
            GS   LH G  PP    P +P L  +PPP     G  P+     P  SPYG+     G  
Sbjct: 1421 GSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPP 1480

Query: 82   GVNAEPPFPGPGHGGP 97
            G  A PP+PGP   GP
Sbjct: 1481 GQQAPPPYPGPHPAGP 1496


>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
          Length = 1582

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 10/76 (13%)

Query: 32   GSPIALHRG--PPGSRGPLIPPLLSLPPPP---WGRGPIRRGLGPRSSPYGR-----GWW 81
            GS   LH G  PP    P +P L  +PPP     G  P+     P  SPYG+     G  
Sbjct: 1401 GSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPP 1460

Query: 82   GVNAEPPFPGPGHGGP 97
            G  A PP+PGP   GP
Sbjct: 1461 GQQAPPPYPGPHPAGP 1476


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 10/96 (10%)

Query: 13   PTQQQP--PLPEREETGDEEDGSP-IALHRGPPGSRGPLIPPLLSLP------PPPWGRG 63
            P  Q P  P  ++ E GD EDG+P +    G PG +GP  PP    P      P P G  
Sbjct: 1432 PGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEA 1491

Query: 64   PIRRGLGPRSSPYGRGWWGVNAEPPFPGP-GHGGPT 98
              +   GP      RG  GV   P   GP G  GPT
Sbjct: 1492 GEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPT 1527



 Score = 36.2 bits (82), Expect = 0.013
 Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 10/83 (12%)

Query: 19   PLPEREETGDEEDGSPIALHRGPPGSRGPLIPP----LLSLPPPPWGRGPIRRGLGPRSS 74
            P+PER      + G      +GPPG  GP+  P    L      P  +GP    LG R  
Sbjct: 1972 PVPERRRGPKGDSGE-----QGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGP 2026

Query: 75   PYGRGWWGVNAEPPFPG-PGHGG 96
            P   G  G   +P  PG PG  G
Sbjct: 2027 PGPSGLAGEPGKPGIPGLPGRAG 2049



 Score = 32.3 bits (72), Expect = 0.19
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 30   EDGSPIALH-RGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPP 88
            E G+P  L  +GPPG  GP+ PP    P  P G GP     G R     +G  G+  E  
Sbjct: 1876 ERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGP----KGDRGETGSKGEQGLPGERG 1931

Query: 89   FPG-PG 93
              G PG
Sbjct: 1932 LRGEPG 1937



 Score = 30.8 bits (68), Expect = 0.56
 Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 40   GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRS--SPYGRGWWGV-NAEPPFPG-PGHG 95
            GPPG RGPL  P    PP   G   ++   G R    P G G  G+   EP  PG PG  
Sbjct: 1374 GPPGPRGPLGDPGPRGPPGLPGTA-MKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSP 1432

Query: 96   GP 97
            GP
Sbjct: 1433 GP 1434



 Score = 30.4 bits (67), Expect = 0.74
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 13   PTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPR 72
            P    PP P   +   +E G  ++  +GPPG +G    P  +    P G   +    G R
Sbjct: 2081 PGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDR 2140

Query: 73   SSPYGRGWWGVNAEPPFPGP-GHGGP 97
              P  RG  G    P  PG  G  GP
Sbjct: 2141 GEPGPRGQDG---NPGLPGERGMAGP 2163



 Score = 29.6 bits (65), Expect = 1.3
 Identities = 31/88 (35%), Positives = 31/88 (35%), Gaps = 15/88 (17%)

Query: 18   PPLPEREETGDEEDGSPIALHR-GPPGSRG----PLIPPLLSLPPPPWGRGPIRRGLGPR 72
            P  P    T   E G P A  R G PG  G    P  P L   P  P          GPR
Sbjct: 1285 PQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLP----------GPR 1334

Query: 73   SSPYGRGWWGVNAEPPFPGPGHGGPTRG 100
              P  RG  G   EP  PG   GG   G
Sbjct: 1335 GDPGERGPRGPKGEPGAPGQVIGGEGPG 1362



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 29/97 (29%), Positives = 34/97 (35%), Gaps = 17/97 (17%)

Query: 12   PPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGP 71
            PP +     P   E G+  D       RG  G RGP   P L   P   G    R   GP
Sbjct: 1704 PPGRLVDTGPGAREKGEPGD-------RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGP 1756

Query: 72   RSSPYGRGWWGVNAEPPFPG----------PGHGGPT 98
            +  P  RG  G   +   PG          PG  GP+
Sbjct: 1757 QGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPS 1793


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 36/113 (31%), Positives = 44/113 (38%), Gaps = 12/113 (10%)

Query: 5   KKQNHHQPPTQQQPPLPE--REETGDEEDGSPIALHRGPPG----SRGPLIPPLLSLPPP 58
           K Q    PP + Q P P+   +  G    G P    +GPP     SR P  PP     PP
Sbjct: 46  KPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP----QGPPPQGDKSRSPRSPPGKPQGPP 101

Query: 59  PWGRGPIRRGLGPRSSPYGRGWWGVNAE--PPFPGPGHGGPTRGSFHKEQRNP 109
           P G    +    P   P G    G N    PP PG   G P +G   +  R+P
Sbjct: 102 PQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSP 154



 Score = 36.6 bits (83), Expect = 0.010
 Identities = 31/114 (27%), Positives = 41/114 (35%), Gaps = 6/114 (5%)

Query: 2   PKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPG----SRGPLIPPLLSLPP 57
           P+   Q    PP   +P  P  +     +   P    +GPP     SR P  PP     P
Sbjct: 102 PQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP 161

Query: 58  PPWGRGPIRRGLGPRSSPYGRGWWGVNAE--PPFPGPGHGGPTRGSFHKEQRNP 109
           PP G    +    P   P G    G      PP PG   G P +G   +  ++P
Sbjct: 162 PPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSP 215



 Score = 34.7 bits (78), Expect = 0.039
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 12  PPTQQQPPLPE--REETGDEEDGSPIALHRGPPG----SRGPLIPPLLSLPPPPWGRGPI 65
           PP + Q P P+  ++  G    G P    +GPP     SR    PP     PPP G    
Sbjct: 175 PPGKPQGPPPQGGKKPQGPPPPGKP----QGPPPQGDKSRSSQSPPGKPQGPPPQGGNQP 230

Query: 66  RRGLGPRSSPYGRGWWGVNAE--PPFPGPGHGGPTR-GSFHKEQRNP 109
           +    P   P G    G N    PP PG   G P + GS  +  R+P
Sbjct: 231 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP 277



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 26/109 (23%), Positives = 36/109 (33%), Gaps = 1/109 (0%)

Query: 2   PKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWG 61
           P+   Q    PP   +P  P  +     +   P    +GPP   G       S P  P G
Sbjct: 224 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQG 283

Query: 62  RGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPR 110
             P + G  P+  P   G      + P  G   G P      +  R P+
Sbjct: 284 -PPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 331


>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
          Length = 1604

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 33/86 (38%), Positives = 37/86 (43%), Gaps = 19/86 (22%)

Query: 12   PPTQQQPPLP----EREETGDE-EDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIR 66
            P     P LP    ER  TG   E G P     GPPGS G        LP PP   GP R
Sbjct: 1092 PGATGPPGLPGIKGERGYTGSAGEKGEP-----GPPGSEG--------LPGPPGPAGP-R 1137

Query: 67   RGLGPRSSPYGRGWWGVNAEPPFPGP 92
               GP+ +   +G  G   +P FPGP
Sbjct: 1138 GERGPQGNSGEKGDQGFQGQPGFPGP 1163



 Score = 31.2 bits (69), Expect = 0.43
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 13  PTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPR 72
           P  + PP P  E+      GSP     G  G+ GP+ PP  S+  PP GR   +   G R
Sbjct: 808 PGPRGPPGPTGEKGAQ---GSP-----GVKGATGPVGPPGASVSGPP-GRDGQQGQTGLR 858

Query: 73  SSPYGRGWWGVNAEP 87
            +P  +G  G   EP
Sbjct: 859 GTPGEKGPRGEKGEP 873



 Score = 30.4 bits (67), Expect = 0.74
 Identities = 29/88 (32%), Positives = 32/88 (36%), Gaps = 15/88 (17%)

Query: 12   PPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIR-RGLG 70
            PP     P  E E       G P     GPPG  GP        P PP   GP     +G
Sbjct: 1265 PPGSTGRPGAEGEPGAMGPQGRP-----GPPGHVGP--------PGPPGQPGPAGISAVG 1311

Query: 71   PRSSPYGRGWWGVNAEPPFPG-PGHGGP 97
             +      G  G+   P  PG PGH GP
Sbjct: 1312 LKGDRGATGERGLAGLPGQPGPPGHPGP 1339



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 30/103 (29%), Positives = 36/103 (34%), Gaps = 22/103 (21%)

Query: 17  QPPLPEREETGDEEDGSP--------IALHRGPPGSRGPLIPPLLSLPPPPWGRG----- 63
           Q P   + E GD     P        +A   G PG +G   P  +  P  P   G     
Sbjct: 711 QGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQ 770

Query: 64  --PIRRGLGPRSSPYGRGWWGVNAEPPFPG-------PGHGGP 97
             P  +G+     P GRG  G   EP  PG       PG  GP
Sbjct: 771 GPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGP 813


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 11/74 (14%)

Query: 12  PPTQQQPPLPEREETGDEEDGSPIALHRG------PPGSRGPLIPPLLSLPPPP--WGRG 63
           PPT + PP P R   G      P A  R       PPG+ GP +PP    PPPP   G G
Sbjct: 353 PPTPRGPPPPGR---GGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNG 409

Query: 64  PIRRGLGPRSSPYG 77
           P    L P   P G
Sbjct: 410 PAPPPLPPALVPAG 423



 Score = 30.0 bits (66), Expect = 0.96
 Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 24/92 (26%)

Query: 12  PPTQQQPPLPEREETGDEEDGS------PIALHRGPPGSRGPLIPPLLSLPPPPWGRGPI 65
           PP++    LP     G  +  S      P+ +   PP  RGP  P     PPPP    P 
Sbjct: 318 PPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPP----PP 373

Query: 66  RRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGP 97
             G   RS P            P P PG GGP
Sbjct: 374 ATG---RSGPL-----------PPPPPGAGGP 391


>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
            sapiens]
          Length = 2506

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 35/123 (28%), Positives = 44/123 (35%), Gaps = 17/123 (13%)

Query: 2    PKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWG 61
            P  +K     PP QQQ    ++++      G   A   GP    GP   PL    PP  G
Sbjct: 2301 PVIRKAGGSGPPQQQQQQQQQQQQQAVARPGR--AATSGPRRYPGPTAEPLAGDRPPTGG 2358

Query: 62   RGPIR------------RGLGPRSSPYGRGWW---GVNAEPPFPGPGHGGPTRGSFHKEQ 106
                R            R   PR+  +G   W   G +     PGP H G  RGS + E 
Sbjct: 2359 HSSGRSPRMERRVPGPARSESPRACRHGGARWPASGPHVSEGPPGPRHHGYYRGSDYDEA 2418

Query: 107  RNP 109
              P
Sbjct: 2419 DGP 2421


>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
          Length = 424

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 18/84 (21%)

Query: 38  HRGPPGSRGPLIPPLLSLPPPPWGR---GPIRRGLGPRSSPYGRGW--------WGVNAE 86
           H GPPGS G   PP    P PP G    GP   G+ PR  P+G            G+   
Sbjct: 323 HAGPPGSGGQ--PP----PRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGP 376

Query: 87  PP-FPGPGHGGPTRGSFHKEQRNP 109
           PP  P  G+ GP R   +  QR P
Sbjct: 377 PPLMPPHGYTGPPRPPPYGYQRGP 400



 Score = 34.3 bits (77), Expect = 0.051
 Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 13/96 (13%)

Query: 12  PPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPP------PPWGRGPI 65
           PP     P+     +G    G P      PPGS  P +PP  +LPP      PP    P 
Sbjct: 216 PPPSAPNPVVSSLGSGLPPPGMP------PPGSFPPPVPPPGALPPGIPPAMPPPPMPPG 269

Query: 66  RRGLGPRSS-PYGRGWWGVNAEPPFPGPGHGGPTRG 100
             G GP S+   G G  G     P P P  G P  G
Sbjct: 270 AAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPG 305


>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
          Length = 1178

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 35/103 (33%), Positives = 40/103 (38%), Gaps = 23/103 (22%)

Query: 13  PTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPR 72
           PT    P PE EE   E D  P A  + P   R    PP    PPPP   GP R  L P 
Sbjct: 10  PTHPAEPPPEAEEP--EADARPGA--KAPSRRRRDCRPP----PPPPPPAGPSRGPLPPP 61

Query: 73  SSPYGRGWWGVNAEPPFPG--------PGHGGPTRGSFHKEQR 107
             P G G       PP  G        PG GG    +  +++R
Sbjct: 62  PPPRGLG-------PPVAGGAAAGAGMPGGGGGPSAALREQER 97


>gi|54607014 TBC1 domain family, member 25 [Homo sapiens]
          Length = 688

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 8   NHHQPPTQQQPP-LPEREETGDEEDGSPIALHRGPPGSRGPLIPPL--LSLPPP-PWGRG 63
           +H   P+   PP   E   TGD   GSP+    G P   G  +PP+  + LPPP  +GRG
Sbjct: 555 SHPDSPSSSSPPSTQEASPTGDMAVGSPLMQEVGSPKDPGKSLPPVPPMGLPPPQEFGRG 614


>gi|11386161 alpha 2 type IX collagen [Homo sapiens]
          Length = 689

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 34/96 (35%), Positives = 40/96 (41%), Gaps = 13/96 (13%)

Query: 12  PPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIP---PLLSLPPPPWGRGPIRRG 68
           PP ++ PP P         DG  I    GPPG  GP  P   P  + P  P G+  I  G
Sbjct: 28  PPGERGPPGPPGPPGVPGSDG--IDGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGID-G 84

Query: 69  L-------GPRSSPYGRGWWGVNAEPPFPGPGHGGP 97
           L       GP   P  +G  G+   P  PGPG  GP
Sbjct: 85  LTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP 120



 Score = 29.3 bits (64), Expect = 1.6
 Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 34/115 (29%)

Query: 12  PPTQQQPPLPERE--------ETGDEEDGSPIAL-----------HRGPPGSRGPL-IPP 51
           PP ++  P P  E        + GD+ +  P+              +GPPG  GP  +P 
Sbjct: 365 PPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPG 424

Query: 52  LLSLPPPPWGRGPIRR-------GL-------GPRSSPYGRGWWGVNAEPPFPGP 92
           +      P   GP  +       GL       G    P  +G  GV  EP +PGP
Sbjct: 425 VKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGP 479



 Score = 27.7 bits (60), Expect = 4.8
 Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 30  EDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPF 89
           E G P  + RG PG  GP  P +  LP  P G+  I    G R SP   G  G    P  
Sbjct: 602 EKGDPGEVGRGHPGMPGP--PGIPGLPGRP-GQA-INGKDGDRGSP---GAPGEAGRPGL 654

Query: 90  PGP 92
           PGP
Sbjct: 655 PGP 657


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 36/107 (33%), Positives = 42/107 (39%), Gaps = 20/107 (18%)

Query: 12  PPTQQQPPLPEREETGDEEDGSPI-----ALHRGPPGSRGPLIPP--------LLSLPPP 58
           PP +Q P +P    +   E    +     +LHR  PG    L PP        LLS  PP
Sbjct: 253 PPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPP 312

Query: 59  PWGRGPIRRGLG-PRSSPYGRGWWGVNAEPPFPGP----GHGGPTRG 100
           P  R P  RG   P   P  R   G    PP P P    G   P+RG
Sbjct: 313 PPARDPPSRGAAPPPPPPVIRN--GARDAPPPPPPYRMHGSEPPSRG 357



 Score = 35.0 bits (79), Expect = 0.030
 Identities = 37/135 (27%), Positives = 48/135 (35%), Gaps = 20/135 (14%)

Query: 12  PPTQQQPPLPEREETGD----EEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWG--RGPI 65
           PPT    PLP           E+   P    R  PG  GP  PP +  PP P     GP 
Sbjct: 189 PPT----PLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPS 244

Query: 66  RRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHK--EQRNPRRLKSWSLIKNTCP 123
            + L P   PY         +PP    G   PT  S  +  ++ N    K+   ++   P
Sbjct: 245 GQSLAPPPPPY--------RQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAP 296

Query: 124 PKDDPQVMEDKSDRP 138
           P          S+RP
Sbjct: 297 PPPTSASPSLLSNRP 311


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 31/75 (41%), Positives = 36/75 (48%), Gaps = 9/75 (12%)

Query: 30   EDGSP----IALHRGPPGSRGPLIPPLLSLPPPPWGRG-PIRRGL-GPRSSPYGRGWWGV 83
            E G P    ++  RGPPG +G  +P L      P   G P   GL G   SP G+G  G 
Sbjct: 979  ESGKPGANGLSGERGPPGPQG--LPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGE 1036

Query: 84   NAEPPFPG-PGHGGP 97
            N  P  PG PGH GP
Sbjct: 1037 NGSPGAPGAPGHPGP 1051



 Score = 35.8 bits (81), Expect = 0.018
 Identities = 32/81 (39%), Positives = 35/81 (43%), Gaps = 6/81 (7%)

Query: 24  EETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRG--PIRRGL-GPRSSPYGRGW 80
           E  G   DG P     GP G  GP+ PP  +  P   G G  P   G+ GPR SP  RG 
Sbjct: 745 EPGGPGADGVPGK--DGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGE 802

Query: 81  WGVNAEPPFPG-PGHGGPTRG 100
            G      FPG PG  G   G
Sbjct: 803 TGPPGPAGFPGAPGQNGEPGG 823



 Score = 34.3 bits (77), Expect = 0.051
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 19/81 (23%)

Query: 22  EREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGL-GPRSSPYGRGW 80
           ER   G++ +G P  +  GPPG  GP  PP           GP  +G+ G R SP G G 
Sbjct: 826 ERGAPGEKGEGGPPGV-AGPPGGSGPAGPP-----------GP--QGVKGERGSPGGPGA 871

Query: 81  WGVNAEPPFPGP----GHGGP 97
            G       PGP    G+ GP
Sbjct: 872 AGFPGARGLPGPPGSNGNPGP 892



 Score = 30.8 bits (68), Expect = 0.56
 Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 16/74 (21%)

Query: 30  EDGSPIALHRGPPGSRGPL----IPPLLSLPPPPWGRGPIRRGL-GPRSSPYGRGWWGVN 84
           E GSP A  +GPPG+ GPL    I     L  PP        G+ GPR SP  +G  G +
Sbjct: 931 EKGSPGA--QGPPGAPGPLGIAGITGARGLAGPP--------GMPGPRGSPGPQGVKGES 980

Query: 85  AEPPFPG-PGHGGP 97
            +P   G  G  GP
Sbjct: 981 GKPGANGLSGERGP 994



 Score = 30.4 bits (67), Expect = 0.74
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 27  GDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAE 86
           G   DG P     GPPGS+G    P    P  P G+  +    GP+ +    G  G    
Sbjct: 544 GPGSDGKP-----GPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGG 598

Query: 87  PPFPGP 92
           P  PGP
Sbjct: 599 PGGPGP 604



 Score = 29.6 bits (65), Expect = 1.3
 Identities = 34/101 (33%), Positives = 37/101 (36%), Gaps = 22/101 (21%)

Query: 19  PLPEREETG----------DEEDGSP----------IALHRGPPGSRGPLIPPLLSLPPP 58
           P  ER E G          D +DGSP           A  RG PG RGP  P  +     
Sbjct: 445 PRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKG 504

Query: 59  PWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPG-PGH-GGP 97
           P G        GPR +    G  GV   P   G PG  GGP
Sbjct: 505 PAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGP 545



 Score = 29.6 bits (65), Expect = 1.3
 Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 40   GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPG-PGHGGP 97
            G PG  GP  P   S PP   G       +GP      RG  G    P  PG PG  GP
Sbjct: 1131 GSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGP 1189



 Score = 29.3 bits (64), Expect = 1.6
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 8/44 (18%)

Query: 58  PPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPG----PGHGGP 97
           PP G+GP     GP+  P   G  G N +P  PG    PG  GP
Sbjct: 98  PPNGQGP----QGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGP 137



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 27/81 (33%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 30  EDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPF 89
           E G P     GPPG  GP   P +   P P G        G R  P G G  G   +   
Sbjct: 559 ESGRP-----GPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGE 613

Query: 90  PGP-GHGGPTRGSFHKEQRNP 109
            GP G  GPT     K    P
Sbjct: 614 TGPQGPPGPTGPGGDKGDTGP 634



 Score = 27.7 bits (60), Expect = 4.8
 Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 15/86 (17%)

Query: 12  PPTQQQPPLPEREETGDEED-GSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLG 70
           PP +   P     E G + D G+P     G PG +G    P    PP   G   +R G G
Sbjct: 649 PPGENGKP----GEPGPKGDAGAP-----GAPGGKGDAGAPGERGPPGLAGAPGLRGGAG 699

Query: 71  PRSSPYGRGWWGVNAEPPFPGPGHGG 96
           P     G+G     A PP P PG  G
Sbjct: 700 PPGPEGGKG----AAGPPGP-PGAAG 720


>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 12/146 (8%)

Query: 10  HQPPTQQQPPL---PEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGR---G 63
           +QPP++  PPL   P R  +       P    R  PGS  P  PP  + P     R   G
Sbjct: 31  NQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAG 90

Query: 64  PIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNTCP 123
           P  R     S    RG  G   + P  G   G   R +      +PR   + ++   + P
Sbjct: 91  PTHRLSASHSRVSSRGPVGTKPKRPGQGRRAGARMRSA---APASPRARAARAISNQSSP 147

Query: 124 PKDDPQVMEDKSDR---PVCRHFAKK 146
           P   P     +S R   P  RH A+K
Sbjct: 148 PPPPPSRARSRSLRLSAPGSRHDAEK 173


>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
           sapiens]
          Length = 274

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 12/146 (8%)

Query: 10  HQPPTQQQPPL---PEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGR---G 63
           +QPP++  PPL   P R  +       P    R  PGS  P  PP  + P     R   G
Sbjct: 31  NQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAG 90

Query: 64  PIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNTCP 123
           P  R     S    RG  G   + P  G   G   R +      +PR   + ++   + P
Sbjct: 91  PTHRLSASHSRVSSRGPVGTKPKRPGQGRRAGARMRSA---APASPRARAARAISNQSSP 147

Query: 124 PKDDPQVMEDKSDR---PVCRHFAKK 146
           P   P     +S R   P  RH A+K
Sbjct: 148 PPPPPSRARSRSLRLSAPGSRHDAEK 173


>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
          Length = 1690

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 12/83 (14%)

Query: 27  GDEEDGSP----IALHRGPPGSRGPLIPPLLSLPPPPWGRG----PIRRGLGPRSSPYGR 78
           GD ED +P         GPPG  GP+ PP L  P PP  RG    P   G+       G+
Sbjct: 602 GDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQ 661

Query: 79  GWWGVNAEPPFPG----PGHGGP 97
               ++    +PG    PG  GP
Sbjct: 662 KGDTISCNVTYPGRHGPPGFDGP 684



 Score = 36.2 bits (82), Expect = 0.013
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 40  GPPGSRGPLIPPLLSLPPPPW--GRGPIRRGLGPRSSPYGRGWWGVNAEPPFPG----PG 93
           GPPG +GP+ P  L  P P    G   +R   GP  +   +G  G    P FPG    PG
Sbjct: 68  GPPGPQGPIGP--LGAPGPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPG 125

Query: 94  HGGP 97
           H GP
Sbjct: 126 HPGP 129



 Score = 32.0 bits (71), Expect = 0.25
 Identities = 27/73 (36%), Positives = 30/73 (41%), Gaps = 21/73 (28%)

Query: 39  RGPPGSRG----------PLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPP 88
           RGPPG+ G          P  P L  +P  P   GP     GPR  P   G  G   +P 
Sbjct: 97  RGPPGAAGDKGDKGPTGVPGFPGLDGIPGHP---GPP----GPRGKPGMSGHNGSRGDPG 149

Query: 89  FPGP----GHGGP 97
           FPG     G GGP
Sbjct: 150 FPGGRGALGPGGP 162



 Score = 32.0 bits (71), Expect = 0.25
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 34   PIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPG-P 92
            P   HRG PG +G   PP    PP P G   +R  +G    P  +G  G    P F G  
Sbjct: 1009 PPGFHRGEPGEKGQPGPP---GPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGID 1065

Query: 93   GHGGP 97
            G  GP
Sbjct: 1066 GARGP 1070



 Score = 30.8 bits (68), Expect = 0.56
 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 25   ETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWG-RGPIRRGLGPRSSPYGRGWWGV 83
            E GD   GSP     GP G +GP  PP  S PP P G  G   + +     P  +G  G 
Sbjct: 1211 ERGDP--GSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGP 1268

Query: 84   NAEPPFPGP 92
            +     PGP
Sbjct: 1269 DGPRGAPGP 1277



 Score = 30.8 bits (68), Expect = 0.56
 Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 12/99 (12%)

Query: 12   PPTQQQPPLPEREETGDEEDGSP--IALHRG---------PPGSRGPLIPPLLSLPPPPW 60
            PP  Q PP P+         G P  + L RG         PPG  GP  PP     P   
Sbjct: 1259 PPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCD 1318

Query: 61   GRGPIRRGLGPRSSPYGRGWWGVNAEPPFPG-PGHGGPT 98
            G+   +  +G        G+ G   E   PG PG  GPT
Sbjct: 1319 GKDGQKGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPT 1357



 Score = 29.3 bits (64), Expect = 1.6
 Identities = 31/87 (35%), Positives = 35/87 (40%), Gaps = 8/87 (9%)

Query: 13   PTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPR 72
            PT    P  E     D +D   I    G PG RGP     + LP     RGP   G G +
Sbjct: 1356 PTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGP--EGAMGLPGM---RGP--SGPGCK 1408

Query: 73   SSPYGRGWWGVNAEPPFPG-PGHGGPT 98
              P   G  GV+  P  PG PG  G T
Sbjct: 1409 GEPGLDGRRGVDGVPGSPGPPGRKGDT 1435



 Score = 27.3 bits (59), Expect = 6.2
 Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 17/76 (22%)

Query: 38  HRGPPGSRGPLIPPLLSLPPPPWGRG-PIRRG----LGPRSSP--YGR------GWWGVN 84
           +RG PG  G L+ P L L  PP   G P R G    +GP   P   GR      G  G  
Sbjct: 348 NRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPP 407

Query: 85  AEPPFPG----PGHGG 96
               FPG    PG  G
Sbjct: 408 GPQGFPGLPGLPGEAG 423



 Score = 27.3 bits (59), Expect = 6.2
 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 9/60 (15%)

Query: 40  GPPGSRGPL----IPPLLSLPPPPWGRGPIRRGLGPRSSPYG----RGWWGVNAEPPFPG 91
           GPPG RGP        L +  P P G  P   GL  R    G     GW G   +P  PG
Sbjct: 475 GPPGGRGPKGEKGNEGLCACEPGPMG-PPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPG 533



 Score = 26.9 bits (58), Expect = 8.1
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 39  RGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGP 92
           +G PG+RG   PP + + PP     P++   GP   P   G +G   +   PGP
Sbjct: 343 KGDPGNRGHPGPPGVLVTPPL----PLK---GPPGDPGFPGRYGETGDVGPPGP 389


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 36/120 (30%), Positives = 41/120 (34%), Gaps = 15/120 (12%)

Query: 2   PKRKKQNHHQPPTQQQP---PLPEREETGDEEDGSP-----IALHRGP---PGSRGPLIP 50
           P    Q    PP   +P   PLP      DE    P     ++    P   PG  GPL P
Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPP 359

Query: 51  PLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPR 110
           P    PPPP    P R G  P   P  R      A P  P      P+R      +  PR
Sbjct: 360 PPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQL----PSRSGVDSPRSGPR 415



 Score = 30.0 bits (66), Expect = 0.96
 Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 40/109 (36%)

Query: 1   MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPP--------- 51
           +P   +     PP  ++PP P R+                PPG  GPL PP         
Sbjct: 348 LPSPGRSGPLPPPPSERPPPPVRD----------------PPGRSGPLPPPPPVSRNGST 391

Query: 52  LLSLPPPPWGRGPIRRGL-GPRSSPYGRGWWGVNAEPPFP--GPGHGGP 97
             +LP  P  + P R G+  PRS P           PP P   P  G P
Sbjct: 392 SRALPATP--QLPSRSGVDSPRSGP----------RPPLPPDRPSAGAP 428



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 31/106 (29%), Positives = 36/106 (33%), Gaps = 15/106 (14%)

Query: 2   PKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWG 61
           P R   +   PP    PP+  R     E    P   +  PP    P        PPPP  
Sbjct: 256 PSRALDDKPPPPP---PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP-- 310

Query: 62  RGPIRRG---LGPRSSPYG-------RGWWGVNAEPPFPGPGHGGP 97
             P R G   L P SS          R     ++ PP P PG  GP
Sbjct: 311 PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGP 356



 Score = 28.1 bits (61), Expect = 3.7
 Identities = 38/138 (27%), Positives = 47/138 (34%), Gaps = 36/138 (26%)

Query: 12  PPTQQQPPLPEREETGDEEDGSPIALHRGPP-----GSRGPLIPPLLSLPPPPWGRGPIR 66
           P  +  PP P+R              +R PP     GS+   IPP +   P P    P  
Sbjct: 155 PGHRSGPPEPQR--------------NRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHN 200

Query: 67  RGL-----GPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNT 121
           RG      GPR    G         PPFPG        GS  +       L S S   N 
Sbjct: 201 RGSPPVPGGPRQPSPG------PTPPPFPGNRGTALGGGSIRQSP-----LSSSSPFSNR 249

Query: 122 CP-PKDDPQVMEDKSDRP 138
            P P    + ++DK   P
Sbjct: 250 PPLPPTPSRALDDKPPPP 267


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 36/120 (30%), Positives = 41/120 (34%), Gaps = 15/120 (12%)

Query: 2   PKRKKQNHHQPPTQQQP---PLPEREETGDEEDGSP-----IALHRGP---PGSRGPLIP 50
           P    Q    PP   +P   PLP      DE    P     ++    P   PG  GPL P
Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPP 359

Query: 51  PLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPR 110
           P    PPPP    P R G  P   P  R      A P  P      P+R      +  PR
Sbjct: 360 PPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQL----PSRSGVDSPRSGPR 415



 Score = 30.0 bits (66), Expect = 0.96
 Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 40/109 (36%)

Query: 1   MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPP--------- 51
           +P   +     PP  ++PP P R+                PPG  GPL PP         
Sbjct: 348 LPSPGRSGPLPPPPSERPPPPVRD----------------PPGRSGPLPPPPPVSRNGST 391

Query: 52  LLSLPPPPWGRGPIRRGL-GPRSSPYGRGWWGVNAEPPFP--GPGHGGP 97
             +LP  P  + P R G+  PRS P           PP P   P  G P
Sbjct: 392 SRALPATP--QLPSRSGVDSPRSGP----------RPPLPPDRPSAGAP 428



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 31/106 (29%), Positives = 36/106 (33%), Gaps = 15/106 (14%)

Query: 2   PKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWG 61
           P R   +   PP    PP+  R     E    P   +  PP    P        PPPP  
Sbjct: 256 PSRALDDKPPPPP---PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP-- 310

Query: 62  RGPIRRG---LGPRSSPYG-------RGWWGVNAEPPFPGPGHGGP 97
             P R G   L P SS          R     ++ PP P PG  GP
Sbjct: 311 PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGP 356



 Score = 28.1 bits (61), Expect = 3.7
 Identities = 38/138 (27%), Positives = 47/138 (34%), Gaps = 36/138 (26%)

Query: 12  PPTQQQPPLPEREETGDEEDGSPIALHRGPP-----GSRGPLIPPLLSLPPPPWGRGPIR 66
           P  +  PP P+R              +R PP     GS+   IPP +   P P    P  
Sbjct: 155 PGHRSGPPEPQR--------------NRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHN 200

Query: 67  RGL-----GPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNT 121
           RG      GPR    G         PPFPG        GS  +       L S S   N 
Sbjct: 201 RGSPPVPGGPRQPSPG------PTPPPFPGNRGTALGGGSIRQSP-----LSSSSPFSNR 249

Query: 122 CP-PKDDPQVMEDKSDRP 138
            P P    + ++DK   P
Sbjct: 250 PPLPPTPSRALDDKPPPP 267


>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
           sequence-like 1 [Homo sapiens]
          Length = 491

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 18/120 (15%)

Query: 7   QNHHQPPTQQQPPLPEREETGDEEDGSP-IALHRGPPGSRGPLIPPLLSLPPPPWGRGPI 65
           Q H+ PP    PP+        +  G+P +   + PP       PP+ S PPP     P 
Sbjct: 338 QQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPP-------PPMTSAPPP---ITPP 387

Query: 66  RRGLGPRSSPYGRGWWGVNAEPPF-PGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNTCPP 124
              +  +  PY      +N  PP  P P HGGP   +      NP  L  ++  + T  P
Sbjct: 388 PGHIIAQMPPY------MNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSP 441



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 28/101 (27%), Positives = 35/101 (34%), Gaps = 24/101 (23%)

Query: 12  PPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGP-------LIPPLL----SLPPPPW 60
           PP    PP            G P   H GPP +  P        +P       +L PP  
Sbjct: 396 PPYMNHPP-----------PGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFT 444

Query: 61  GRGPIRRGL--GPRSSPYGRGWWGVNAEPPFPGPGHGGPTR 99
             G +  G+   PR  P      G  ++ P PGP H   TR
Sbjct: 445 QPGGMSPGIWPAPRGPPPPPRLQGPPSQTPLPGPHHPDQTR 485


>gi|73476377 LBXCOR1 homolog [Homo sapiens]
          Length = 921

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 35/107 (32%), Positives = 39/107 (36%), Gaps = 28/107 (26%)

Query: 21  PEREETGDEEDGSPIALHRGP---PGSRGPLIPPLLSLPPPPWGRGPIRRG--------- 68
           P +E     E+  P AL RGP    G+   L PPL  LPPPP    P R+G         
Sbjct: 497 PAKESGLGAEERCPSALSRGPLDEDGTDEALPPPLAPLPPPP--PPPARKGSYVSAFRPV 554

Query: 69  ----------LGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKE 105
                      G     YG G     A  P PG G GG     F  E
Sbjct: 555 VKDTESIAKLYGSAREAYGAG----PARGPGPGAGSGGYVSPDFLSE 597



 Score = 27.3 bits (59), Expect = 6.2
 Identities = 29/93 (31%), Positives = 32/93 (34%), Gaps = 19/93 (20%)

Query: 40  GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTR 99
           GPPG      PP    P P  G G      GP       G  GV + P  P P  G    
Sbjct: 291 GPPGP-----PP----PHPQRGLGLATGASGPAGPGGPGGGAGVRSYPVIPVPSKG---- 337

Query: 100 GSFHKEQRNPRRL----KSWSLIKNTCPPKDDP 128
             F   Q+ P  L      +      CP KDDP
Sbjct: 338 --FGLLQKLPPPLFPHPYGFPTAFGLCPKKDDP 368


>gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]
          Length = 1745

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 10/94 (10%)

Query: 19  PLPEREETGDEEDGSP-IALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYG 77
           P+ E+ ++G  + G P +   RGPPGSRG    P  +  P P  +G + +  G    P  
Sbjct: 813 PIGEKGKSG--KTGQPGLEGERGPPGSRGERGQPGATGQPGP--KGDVGQD-GAPGIPGE 867

Query: 78  RGWWGVNAEPPFPG----PGHGGPTRGSFHKEQR 107
           +G  G+   P FPG    PGH G      H  QR
Sbjct: 868 KGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQR 901



 Score = 31.2 bits (69), Expect = 0.43
 Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 27   GDEEDGSPIALHRGPPGSRGPLIPP-LLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNA 85
            GD+    P+  + G PG RGPL P   + LP      GP+    G + S   RG  G   
Sbjct: 995  GDKGPPGPVGAN-GSPGERGPLGPAGGIGLPGQSGSEGPVGPA-GKKGSRGERGPPGPTG 1052

Query: 86   EPPFPGP-GHGGP 97
            +   PGP G  GP
Sbjct: 1053 KDGIPGPLGPLGP 1065



 Score = 29.3 bits (64), Expect = 1.6
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 14/71 (19%)

Query: 40  GPPGSRGPLIPPLLSLPPPPWGRG-------PIRRGL----GPRSSPYGRGWWGV-NAEP 87
           G PG++G + PP    P PP  +G       P  +GL    G +  P   G  G+  ++ 
Sbjct: 623 GAPGAKGNVGPP--GEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDG 680

Query: 88  PFPGPGHGGPT 98
           P   PGH GPT
Sbjct: 681 PLGHPGHEGPT 691



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 21/113 (18%)

Query: 12   PPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPL-------------IPPLLSLPPP 58
            PP     P P + + G++ D  P     GPPG +GP              +P  L  P  
Sbjct: 1215 PPGAPGIPGP-KGDIGEKGDSGPSGA-AGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGD 1272

Query: 59   PWGRGPIRRGLGPRSSP---YGRGWWGVNAEPPFPG-PGHGGPTRGSFHKEQR 107
            P G   I    G +  P    G G  G + EP  PG PG  GP+ G   +E R
Sbjct: 1273 P-GVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPS-GHMGREGR 1323



 Score = 26.9 bits (58), Expect = 8.1
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 38  HRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPG------ 91
           H GP G +G   PP  + PP   G   ++   G R     +G  G +  P F G      
Sbjct: 687 HEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKG 746

Query: 92  ----PGHGGP 97
               PG  GP
Sbjct: 747 DQGKPGAPGP 756


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 29/100 (29%), Positives = 37/100 (37%), Gaps = 3/100 (3%)

Query: 2   PKRKKQNHHQPPTQQQPPLPEREETGDEEDGSP-IALHRGPPGSRGPLIPPLLSLPP--P 58
           P  ++   HQPP   QP   ++     ++   P +A   GP    G   P   S PP  P
Sbjct: 77  PPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATP 136

Query: 59  PWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPT 98
           P    P   G GP  +P           PP   P  G PT
Sbjct: 137 PTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPT 176



 Score = 33.1 bits (74), Expect = 0.11
 Identities = 32/90 (35%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 12  PPTQQQPPL----PEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRR 67
           PPT   PP     P            P A    PP S  P  PP    PPPP    P   
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVP-GP 194

Query: 68  GLGPRSSPYGRGWWGVNAEPPFPGPGHGGP 97
           G GP+  P G G       P  P PG GGP
Sbjct: 195 GPGPKQGP-GPGGPKGGKMPGGPKPG-GGP 222


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 37/122 (30%), Positives = 45/122 (36%), Gaps = 25/122 (20%)

Query: 9    HHQPPTQ---QQPPLPEREETGDEED--GSPIALHRGPPGSRGPLIPPLLSLPPPPWGRG 63
            HH+P  +     PP P R E G          +L   PP +R  L   L  LPP   G G
Sbjct: 1400 HHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSL---LHRLPPTAPGVG 1456

Query: 64   PIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNTCP 123
            P+   LG               EPP P PG   P R +  +E   P RL         C 
Sbjct: 1457 PLLLQLG--------------TEPPAPHPGVSKPWRSAAPEE---PERLPLHVRFLENCQ 1499

Query: 124  PK 125
            P+
Sbjct: 1500 PR 1501



 Score = 32.3 bits (72), Expect = 0.19
 Identities = 30/98 (30%), Positives = 33/98 (33%), Gaps = 35/98 (35%)

Query: 8    NHHQPPTQQQ-----PPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGR 62
            +HH PP Q       PP P   ETG   D  P                P L+L P P  R
Sbjct: 1005 HHHAPPPQPHHHHAHPPHPPEMETGGSPDDPP----------------PRLALGPQPSLR 1048

Query: 63   GPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRG 100
            G   RG GP  +P              P P H G   G
Sbjct: 1049 G--WRGGGPSPTPGA------------PSPSHHGSAGG 1072



 Score = 31.2 bits (69), Expect = 0.43
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)

Query: 42  PGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGRGWWGVNAEPPFPGPGHGGPTRGS 101
           PGS     PP  S P PP+   P+    G R +P  RG        PF  PG GGP   S
Sbjct: 915 PGSEDIPPPPTTSPPEPPYSTPPVPSSSG-RLTPSPRG-------GPF-NPGSGGPLPAS 965



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 10 HQPPT---QQQPPLPEREETGDEEDGSPIALHRGPPGSRG 46
          H P T   +++    E  E G E D SP    RGP G+RG
Sbjct: 3  HSPATSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRG 42



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 33   SPIALHRGPPGSRGPLIP---PLLSLPPPP 59
            +P+   RGPP   GP +P   P  S+PP P
Sbjct: 1502 APVTSGRGPPSEDGPGVPPPSPRRSVPPSP 1531


>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
          Length = 1003

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 41/138 (29%), Positives = 55/138 (39%), Gaps = 32/138 (23%)

Query: 12  PPTQQQPPL--PEREETGDEEDGS--PIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRR 67
           PP Q + P   PE   +  E + +  P++    P GS  P +P LL+            R
Sbjct: 804 PPEQPEAPCLPPESPASALEPEPARPPLSALAPPHGSPDPPVPELLT-----------GR 852

Query: 68  GLGPRSSPYGRGWWGVNAEP-PFPGPGHGG-----------PTRGSFHKE-QRNPRRLKS 114
           G G R    G G  G+N E  P  G   G             TRG F+ + +R+PRR   
Sbjct: 853 GSGKRGRRGGGGLRGINGEARPARGRKPGSRREPGRLALKWGTRGGFNGQMERSPRRTHH 912

Query: 115 W----SLIKNTCPPKDDP 128
           W     L +    PKD P
Sbjct: 913 WQHNGELAEGGAEPKDPP 930


>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
           sapiens]
          Length = 729

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 18/129 (13%)

Query: 13  PTQQQPPLPERE-ETGDEEDGSP-----IALHRGPPGSRGPLIPPLLSLPPPPWGRGPIR 66
           P  Q P +P     TG    G+P     + L+  PP S  P +PP  +LPPP     P  
Sbjct: 295 PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPP-VPPSEALPPPACPSAP-- 351

Query: 67  RGLGPRSSPYGRGWWGVNA-----EPPFPGPGHGGPTRGSFHKEQRNPRRLKSWSLIKNT 121
               PR S   R +    A      PP P P   GP      ++     RL   S +++T
Sbjct: 352 ---APRRSIISRLFGTSPATEAAPPPPEPVPAAEGPATVQSVEDFVPDDRLDR-SFLEDT 407

Query: 122 CPPKDDPQV 130
            P +D+ +V
Sbjct: 408 TPARDEKKV 416


>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
          Length = 380

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 32/89 (35%), Positives = 35/89 (39%), Gaps = 11/89 (12%)

Query: 11  QPPTQQQPPLPEREETGDEEDGSPIALHRGPPGSRGPLIPPLLSLPPPPWGRGPIRRGLG 70
           Q   QQ  P    E       G P     GPP   GP  PP    PPPP G  P     G
Sbjct: 140 QQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPP---GPPPPPGLPP----SG 192

Query: 71  PRSSPYGRGWWGVNAEPPFP---GPGHGG 96
             ++ +G G  G    PP P   GPG GG
Sbjct: 193 VPAAAHGAG-GGPPPAPPLPAAQGPGGGG 220


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.142    0.492 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,978,285
Number of Sequences: 37866
Number of extensions: 895455
Number of successful extensions: 5289
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 546
Number of HSP's that attempted gapping in prelim test: 3578
Number of HSP's gapped (non-prelim): 1911
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.