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Search of human proteins with 239745536
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745536 PREDICTED: hypothetical protein [Homo sapiens]
(159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745536 PREDICTED: hypothetical protein [Homo sapiens] 340 4e-94
gi|239751069 PREDICTED: hypothetical protein [Homo sapiens] 338 1e-93
gi|239745546 PREDICTED: hypothetical protein [Homo sapiens] 335 7e-93
gi|239745525 PREDICTED: hypothetical protein [Homo sapiens] 93 1e-19
gi|239756560 PREDICTED: hypothetical protein [Homo sapiens] 92 2e-19
gi|239757058 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239754410 PREDICTED: hypothetical protein [Homo sapiens] 36 0.016
gi|169171646 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.046
gi|169164497 PREDICTED: hypothetical protein [Homo sapiens] 34 0.046
gi|169166886 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.046
gi|239755433 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.060
gi|239752401 PREDICTED: hypothetical protein [Homo sapiens] 34 0.060
gi|239746918 PREDICTED: hypothetical protein [Homo sapiens] 34 0.060
gi|239745999 PREDICTED: hypothetical protein [Homo sapiens] 33 0.079
gi|239750490 PREDICTED: similar to hCG1820441 [Homo sapiens] 33 0.10
gi|169205554 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.18
gi|239744631 PREDICTED: hypothetical protein [Homo sapiens] 32 0.23
gi|239750545 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.30
gi|169166365 PREDICTED: hypothetical protein [Homo sapiens] 32 0.30
gi|239508766 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.30
gi|169163053 PREDICTED: hypothetical protein, partial [Homo sapi... 31 0.39
gi|169206246 PREDICTED: hypothetical protein, partial [Homo sapi... 31 0.51
gi|239742373 PREDICTED: hypothetical protein XP_002342505 [Homo ... 31 0.51
gi|239508905 PREDICTED: hypothetical protein [Homo sapiens] 31 0.51
gi|169168037 PREDICTED: hypothetical protein [Homo sapiens] 30 0.67
gi|239751568 PREDICTED: hypothetical protein [Homo sapiens] 30 0.87
gi|239749590 PREDICTED: similar to serine/threonine-protein kina... 30 0.87
gi|239752244 PREDICTED: hypothetical protein XP_002348172 [Homo ... 30 1.1
gi|239747025 PREDICTED: hypothetical protein XP_002343908 [Homo ... 30 1.1
gi|169210737 PREDICTED: hypothetical protein [Homo sapiens] 30 1.1
>gi|239745536 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 340 bits (871), Expect = 4e-94
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
Query: 61 PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP 120
PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP
Sbjct: 61 PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP 120
Query: 121 AHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG 159
AHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG
Sbjct: 121 AHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG 159
>gi|239751069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 338 bits (867), Expect = 1e-93
Identities = 158/159 (99%), Positives = 158/159 (99%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
Query: 61 PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP 120
PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP
Sbjct: 61 PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP 120
Query: 121 AHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG 159
AHCAVLLAWGISCPFHNMLFPPG SGLRLGVGSPEGPLG
Sbjct: 121 AHCAVLLAWGISCPFHNMLFPPGGSGLRLGVGSPEGPLG 159
>gi|239745546 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 335 bits (860), Expect = 7e-93
Identities = 157/159 (98%), Positives = 157/159 (98%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
Query: 61 PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP 120
PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP
Sbjct: 61 PAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCLTKRKLRRLGGPLYLVLSAP 120
Query: 121 AHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG 159
AHCAVLLAWGISCPFHNMLFPPG SGLRLGVGSP GPLG
Sbjct: 121 AHCAVLLAWGISCPFHNMLFPPGGSGLRLGVGSPGGPLG 159
>gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 92.8 bits (229), Expect = 1e-19
Identities = 70/172 (40%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS--VCVHVCVLVQTQVCGCASVCV-- 56
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS VC +C V C V V
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
Query: 57 --CSI----IPAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCL---TKRKLR 107
C+ +P P +P P +H + AP C S+ C+ K K
Sbjct: 61 HPCTTGSRSLPEPPSPLALSQP----ATHQCPQLHAPRC------SVHQCVLDQEKTKTS 110
Query: 108 RLGGPLYLVLSAPAHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG 159
R G P+ LS C V G P P + G P GP G
Sbjct: 111 R-GAPVPGPLSPRPLCCV-TCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPG 160
>gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 92.0 bits (227), Expect = 2e-19
Identities = 70/172 (40%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS--VCVHVCVLVQTQVCGCASVCV-- 56
MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVS VC +C V C V V
Sbjct: 1 MCNVCADMPSARDLCVGHVHVDRDAYMEVHVICVSECVCARMCAGADPGVWVCLCVRVFH 60
Query: 57 --CSI----IPAPLAPDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCL---TKRKLR 107
C+ +P P +P P +H + AP C S+ C+ K K
Sbjct: 61 HPCTTGSRSLPEPPSPLALSQP----ATHQCPQLHAPRC------SVHQCVLDQEKTKTS 110
Query: 108 RLGGPLYLVLSAPAHCAVLLAWGISCPFHNMLFPPGASGLRLGVGSPEGPLG 159
R G P+ LS C V G P P + G P GP G
Sbjct: 111 R-GTPVPGPLSPRPLCCV-TCMGDFLPLPQYAVSPRSLRPEARSGVPRGPPG 160
>gi|239757058 PREDICTED: hypothetical protein [Homo sapiens]
Length = 603
Score = 37.0 bits (84), Expect = 0.007
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCG--------CASVCVCSIIPAPL 64
+C H+ V Y+ V+ +C+ V +H+CV + +C C +C+C + A +
Sbjct: 281 ICYTHICVYMCIYICVYTHMCIYVYMHMCVCIYVYICVYAYVCMHICVYMCICICVYAYM 340
Query: 65 APDLFLSPRPHWPSHSLQHISAPSCMRLAALSISVCL 101
+++ H HI C+ + + + +CL
Sbjct: 341 CIYVYM--------HVCMHICVHMCLCMCHICVHMCL 369
Score = 37.0 bits (84), Expect = 0.007
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MCNVCADMPSARDLCVG-HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVC--GCASVCV 56
MC++C M +C+ ++HV + ++V ICV CV++CV +C +CV
Sbjct: 360 MCHICVHMCLCMCVCIYVYMHVCMHMCLCIYVYICVYACVYICVYAYVYICIYVYIHICV 419
Query: 57 CSII 60
C I
Sbjct: 420 CMYI 423
>gi|239754410 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 35.8 bits (81), Expect = 0.016
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 14 LCVG-HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
LCV H+HV Y+ +HV +CV + +HV + V +C C VC+
Sbjct: 55 LCVYIHMHVYLCVYIHMHVYLCVYIHMHVYLCVYIYICMCTYVCI 99
Score = 34.7 bits (78), Expect = 0.035
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 14 LCVG-HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
LCV H+HV Y+ +HV +CV + + +C V +C C VC+
Sbjct: 65 LCVYIHMHVYLCVYIHMHVYLCVYIYICMCTYVCIYICMCTYVCI 109
Score = 29.3 bits (64), Expect = 1.5
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCV--LVQTQVCGCASVCV 56
LCV ++++ Y+ +++ +C VC+++C+ V +C C VC+
Sbjct: 85 LCV-YIYICMCTYVCIYICMCTYVCIYICMCTYVCIYICMCTYVCI 129
Score = 26.6 bits (57), Expect = 9.6
Identities = 10/41 (24%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 19 VHVDRDAYMEVHV-ICVSVCVHVCV--LVQTQVCGCASVCV 56
+++ Y+ +++ +C VC+++C+ V +C C VC+
Sbjct: 99 IYICMCTYVCIYICMCTYVCIYICMCTYVCIYICMCTYVCI 139
>gi|169171646 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 235
Score = 34.3 bits (77), Expect = 0.046
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 18 HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCVC 57
H++V Y+ +H+ +CV + ++VCV + +C C CVC
Sbjct: 16 HIYVCIHIYVCIHIYVCVYIHIYVCVYIH--ICVCIYTCVC 54
Score = 33.9 bits (76), Expect = 0.060
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVH--VCVLVQTQVCGCASVCVC 57
+CV ++H+ Y+ ++V I + VC+H VCV + VC +CVC
Sbjct: 3 MCV-YIHIYVCVYIHIYVCIHIYVCIHIYVCVYIHIYVCVYIHICVC 48
Score = 30.8 bits (68), Expect = 0.51
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
+C+ H++V Y+ V++ I V V +H+CV + T VC VCV
Sbjct: 19 VCI-HIYVCIHIYVCVYIHIYVCVYIHICVCIYTCVCIHIYVCV 61
Score = 27.7 bits (60), Expect = 4.3
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 32 ICVSVCVHVCVLVQTQVCGCAS----VCVCSII 60
+CV ++VCV T +C C +C+C I
Sbjct: 141 MCVYTYIYVCVCTYTYICICVCIYTYICICVYI 173
>gi|169164497 PREDICTED: hypothetical protein [Homo sapiens]
Length = 228
Score = 34.3 bits (77), Expect = 0.046
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 25 AYMEVHVI-CVSVCVHVCVLVQTQVCGCASVCVC 57
AY+ V++ C+ VC+H+CV V C +C+C
Sbjct: 46 AYIYVYMYTCMRVCIHICVYVYIHACMHTYMCIC 79
Score = 30.0 bits (66), Expect = 0.87
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 19 VHVDRDAYMEVHV-----ICVSVCVHVCVLVQTQVCGCASVCV 56
+H AY+ V++ +C+ +CV++C V V C +CV
Sbjct: 80 IHTCVYAYIYVYMYTYMCVCIHICVYLCTYVYIYVYICMHICV 122
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
+C+ H+ V Y+ ++V IC+ +CVH+ + T VC +C+
Sbjct: 98 VCI-HICVYLCTYVYIYVYICMHICVHMYAYMCTYVCIYVYICI 140
Score = 27.7 bits (60), Expect = 4.3
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 18 HVHVDRDAYMEVHVICVSVCV--HVCVLVQTQVCGCASVCV 56
++H YM IC+ CV ++ V + T +C C +CV
Sbjct: 67 YIHACMHTYM---CICIHTCVYAYIYVYMYTYMCVCIHICV 104
Score = 26.6 bits (57), Expect = 9.6
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 18 HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCVC 57
H+ V AYM +V I V +C+H+C+ + V C + +C
Sbjct: 119 HICVHMYAYMCTYVCIYVYICIHMCI---SYVYICVYIYIC 156
>gi|169166886 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 202
Score = 34.3 bits (77), Expect = 0.046
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 14 LCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVC 57
+CV + H+ Y +HV CV +HVCV VC C+C
Sbjct: 91 VCV-YTHIHVCVYTHIHV-CVYTHIHVCVYTHIHVCVYTHTCMC 132
Score = 31.6 bits (70), Expect = 0.30
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVC 57
H+HV Y +HV CV +HVCV VC + VC
Sbjct: 72 HIHVC--VYTHIHV-CVYTHIHVCVYTHIHVCVYTHIHVC 108
Score = 30.0 bits (66), Expect = 0.87
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
Query: 18 HVHVDRDAYMEVHV-------ICVSVCVHVCVLVQTQVCGCASVCVC 57
H+H+ Y +HV +CV +HVCV VC + VC
Sbjct: 56 HIHIY--TYTSIHVCIYTHIHVCVYTHIHVCVYTHIHVCVYTHIHVC 100
Score = 30.0 bits (66), Expect = 0.87
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 14 LCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCV 56
+CV + H+ Y +HV CV +HVCV T +C C+
Sbjct: 99 VCV-YTHIHVCVYTHIHV-CVYTHIHVCVYTHTCMCIHTHTCM 139
>gi|239755433 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 276
Score = 33.9 bits (76), Expect = 0.060
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCVCSIIPAPLAPDLF 69
+CV ++H+ +M V++ +C+ CV++ V + T +C +CV +P LA F
Sbjct: 127 MCV-YIHMCVYIHMCVYIHVCIYTCVYIHVCIYTHICVYIHICVYIYVPHLLALSAF 182
Score = 30.8 bits (68), Expect = 0.51
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 26 YMEVHV-ICVSVCVHVCVLVQTQVCGCASVC 55
Y H+ +CV V H+CV V T +C +C
Sbjct: 54 YTYTHIYVCVYVYTHICVYVYTHICVYTHIC 84
Score = 28.9 bits (63), Expect = 1.9
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
+C+ ++H YM ++ +CV V +H+CV + C +C+
Sbjct: 7 VCI-YIHTHICVYMCIYTYVCVYVYIHICVCICVYTHMCVYMCI 49
Score = 27.3 bits (59), Expect = 5.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 32 ICVSVCVHVCVLVQTQVCGCASVCVCSII 60
+ + VC+H CV ++ CA + +C I
Sbjct: 103 VYIRVCIHTCVYIRVYTYVCAYIHMCVYI 131
>gi|239752401 PREDICTED: hypothetical protein [Homo sapiens]
Length = 250
Score = 33.9 bits (76), Expect = 0.060
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 14 LCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCV 56
+CV ++HV YM +CV V ++CV V T +C C +CV
Sbjct: 149 ICV-YIHVCVYTYM---YMCVCVYTYMCVCVYTHMCVCIHICV 187
Score = 32.3 bits (72), Expect = 0.18
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 26 YMEVHV-ICVSVCVHVCVLVQTQVCGC--ASVCVC 57
YM V++ IC+ V +HVCV +C C +CVC
Sbjct: 140 YMYVYIHICICVYIHVCVYTYMYMCVCVYTYMCVC 174
Score = 31.2 bits (69), Expect = 0.39
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
++HV Y+ ++V C+ +C+++CV V + +C+C I
Sbjct: 112 YIHVCMHMYIYIYV-CMCMCIYICVYVCIYMYVYIHICICVYI 153
Score = 28.9 bits (63), Expect = 1.9
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASV 54
+C+ H++V Y+ ++ ICV + H+C+ +C C V
Sbjct: 27 VCI-HIYVYMRTYVYTYMYICVRMYTHICMYAYVYICTCMCV 67
Score = 28.5 bits (62), Expect = 2.5
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 26 YMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
YM V+V + + VC+H+ + + +C C +CV
Sbjct: 104 YMYVYVYVYIHVCMHMYIYIYVCMCMCIYICV 135
Score = 26.6 bits (57), Expect = 9.6
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 4 VCADMPSARDLCVG-HVHVDRDAYMEVHVIC-----VSVCVHVCVLVQTQVCGCASVCVC 57
+C + + +CV + H+ AY+ +H+ V +++CV + T +C A V +C
Sbjct: 3 ICTYVYTYMYICVRMYTHICIYAYVCIHIYVYMRTYVYTYMYICVRMYTHICMYAYVYIC 62
Query: 58 S 58
+
Sbjct: 63 T 63
>gi|239746918 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 33.9 bits (76), Expect = 0.060
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 18 HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
+V+V Y+ +H+ ICV V +H+CV V +C C + V
Sbjct: 110 YVYVCIYMYVYIHICICVYVYIHICVYVYIHICVCVYIYV 149
Score = 31.6 bits (70), Expect = 0.30
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 11 ARDLCVGHVHVDRDAYMEVHVIC---VSVCVHVCVLVQTQVCGCASVCVCSII 60
AR H+ V YM +V + VC+H+ V V T V C C+C I
Sbjct: 57 ARICTYAHIFVYVYVYMHTYVYVYMHIYVCMHIYVCVYTYVYMCVYTCMCIYI 109
Score = 29.6 bits (65), Expect = 1.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 14 LCVGHVHVDRDAYMEVHVICVS---VCVH--VCVLVQTQVCGCASVCVCS 58
+CV + H+ Y ++V + VC+H +CV + VC A VC+C+
Sbjct: 7 MCV-YTHICMCVYTHMYVCIYTYMYVCIHTYMCVYMHMYVCIYAHVCICT 55
Score = 29.3 bits (64), Expect = 1.5
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVC 57
H H+ Y+ +HV CV+V V + V C +CVC
Sbjct: 166 HTHMCIYMYVYIHV-----CVYVYVYIHVCVYTCMCICVC 200
Score = 28.5 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
++H+ Y+ +H ICV V +H+CV V V VCV + I
Sbjct: 120 YIHICICVYVYIH-ICVYVYIHICVCVYIYV--YIHVCVYTCI 159
Score = 26.9 bits (58), Expect = 7.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQT 46
++HV Y+ +HV CV C+ +CV V T
Sbjct: 176 YIHVCVYVYVYIHV-CVYTCMCICVCVYT 203
>gi|239745999 PREDICTED: hypothetical protein [Homo sapiens]
Length = 292
Score = 33.5 bits (75), Expect = 0.079
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 18 HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCVCSII 60
++HV D YM + IC+ VC + C+ + T +C +C+ + I
Sbjct: 114 YMHVHMDVYMHACLYICMYVCTYKCIYMYTYMCIYTCICMYTYI 157
>gi|239750490 PREDICTED: similar to hCG1820441 [Homo sapiens]
Length = 576
Score = 33.1 bits (74), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 14 LCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCV 56
+C+ +V+V YM +H IC+ VCV+V + +C C VCV
Sbjct: 98 MCILYVYVY--VYMCIH-ICICVCVYVYTYMYMCMCICVYVCV 137
Score = 26.9 bits (58), Expect = 7.4
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 18 HVHVDRDAYMEVHV------ICVSVCVHVCVLVQTQVCGCASVCVC 57
H++V YM +++ + V +C+H+C+ V V +C+C
Sbjct: 85 HIYVYVYTYMYMYMCILYVYVYVYMCIHICICVCVYVYTYMYMCMC 130
Score = 26.9 bits (58), Expect = 7.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 26 YMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSII 60
Y+ V+V V V ++CV + ++ C +C+ + I
Sbjct: 134 YVCVYVYTVYVYAYICVHIHMRIYACIYICIYTYI 168
>gi|169205554 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 180
Score = 32.3 bits (72), Expect = 0.18
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 4 VCADMPSARDLCV---GHVHVDRDAYMEVHVICVSVC--VHVCVLVQTQVCGCASVCVCS 58
VC M + +CV HVH+ Y VH ICV + VH+CV + T V C C+
Sbjct: 62 VCVYMYTHVHICVYMYTHVHICVFMYTHVH-ICVFMYTHVHICVFMYTHVHICIYAYTCT 120
Query: 59 II 60
+
Sbjct: 121 YV 122
Score = 31.2 bits (69), Expect = 0.39
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 3 NVCADMPSARDLCV---GHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCA 52
++C M + +CV HVH+ AY +V I + C ++C+ V VC CA
Sbjct: 91 HICVFMYTHVHICVFMYTHVHICIYAYTCTYVHIRIHTCTYMCIYVYIYVCICA 144
>gi|239744631 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 32.0 bits (71), Expect = 0.23
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 4 VCADMPSARDLCV---GHVHVDRDAYMEVHVICVSVC--VHVCVLVQTQVCGCASVCVCS 58
+C M + +CV HVH+ Y VH ICV + VH+CV + T V C C+
Sbjct: 99 ICVYMYTHVHICVYMYTHVHICVFMYTHVH-ICVFMYTHVHICVFMYTHVHICIYAYTCT 157
Query: 59 II 60
+
Sbjct: 158 YV 159
Score = 26.9 bits (58), Expect = 7.4
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 14 LCVGHVHVDRDAYMEVHV-------ICVSVCVHVCVLVQTQVCGCASVC 55
+CV ++H+ Y+ +H I V +C+HV + + +C +C
Sbjct: 47 MCV-YIHIHICVYIRIHTCVYIYMYIHVYICIHVHMCIYVHICTYVYLC 94
>gi|239750545 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 238
Score = 31.6 bits (70), Expect = 0.30
Identities = 24/118 (20%), Positives = 53/118 (44%), Gaps = 16/118 (13%)
Query: 4 VCADMPSARDLCVG-HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGC------ASVCV 56
+CA + +C+ + H Y+ +H+ CV + +H+CV + +C C +C+
Sbjct: 84 ICAYVYIHAHMCICVYTHTYVHVYIHIHM-CVYIHIHMCVRIHIHMCICVYTHTYVHMCI 142
Query: 57 CSIIPAPLAPDLFLSPRPHWPSHSLQHISA---PSCMRLAALSISVCLTKRKLRRLGG 111
+ I A + ++ + ++ H+ C+ + +L S+ LT R + + G
Sbjct: 143 YTYICAYIHMCIYT-----YVIYTYVHVCVYIHICCLNICSLVFSILLTTRVIIVVAG 195
Score = 30.8 bits (68), Expect = 0.51
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 18 HVHVDRDAYMEVHV---ICVSVCVHVCVLVQTQVCGCASVCVCSIIPA 62
HV++ YM HV +CV V +++ V V +C C V +C I A
Sbjct: 43 HVYI----YMYTHVYIYMCVYVYIYIYVCVYVYICMCICVYICMYICA 86
Score = 30.8 bits (68), Expect = 0.51
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 18 HVHVDRDAYMEVHV-------ICVSVCVHVCVLVQTQVCGCASVCVC 57
HV++ Y+ +++ IC+ +CV++C+ + V A +C+C
Sbjct: 51 HVYIYMCVYVYIYIYVCVYVYICMCICVYICMYICAYVYIHAHMCIC 97
>gi|169166365 PREDICTED: hypothetical protein [Homo sapiens]
Length = 232
Score = 31.6 bits (70), Expect = 0.30
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCV 56
H HV YM HV C +HV V T + C +CV
Sbjct: 66 HTHVCTHTYMYTHV-CTHTYIHVYTCVYTHIHTCIHMCV 103
Score = 28.5 bits (62), Expect = 2.5
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVC 49
++HV Y +H C+ +CVH + T VC
Sbjct: 84 YIHVYTCVYTHIHT-CIHMCVHTHTYMYTHVC 114
Score = 28.5 bits (62), Expect = 2.5
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCV 56
H+ V YM HV C +HV V T + C +CV
Sbjct: 100 HMCVHTHTYMYTHV-CTHTYIHVYTCVYTHIHTCIHMCV 137
Score = 27.7 bits (60), Expect = 4.3
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 18 HVHVDRDAYMEVHVICVSVCVH--VCVLVQTQVC 49
++HV Y +H C+ +CVH VC+ + +C
Sbjct: 118 YIHVYTCVYTHIHT-CIHMCVHTYVCMYIYIYIC 150
>gi|239508766 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 120
Score = 31.6 bits (70), Expect = 0.30
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
Query: 18 HVHVDRDAYMEVHVIC---VSVCVHVCVLVQTQVCGCASVCVC 57
H+H AYM ++ V +CV+VC+ V T C C C
Sbjct: 17 HIH----AYMYIYTYTYTRVCMCVYVCICVHTHTCVCVHTHTC 55
>gi|169163053 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 300
Score = 31.2 bits (69), Expect = 0.39
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 15/58 (25%)
Query: 18 HVHVDRDAYMEVHV---------------ICVSVCVHVCVLVQTQVCGCASVCVCSII 60
H+H+ Y+ +H+ IC+ +C+++C+ + V +C+C I
Sbjct: 42 HIHIYVYVYIYIHIYMYMYICIYMCIYTHICIHICIYMCIYIHIYVYIYVYMCICVYI 99
Score = 30.8 bits (68), Expect = 0.51
Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 18 HVHVDRDAYMEVHV---ICVSVCVHVCVLVQTQVCGCASVCV 56
H+H+ Y+ +H+ +CV + +H+CV V + +C+
Sbjct: 102 HIHICVCVYIHIHIHICVCVYIHIHICVYVYIYIYIYVYMCI 143
Score = 27.7 bits (60), Expect = 4.3
Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 18 HVHVDRDAYMEVHV-----ICVSVCVHVCVLVQTQVCGCASVCV 56
H+H+ Y+ +H+ I + + V++C+ T +C +C+
Sbjct: 114 HIHICVCVYIHIHICVYVYIYIYIYVYMCIYTYTYMCIYVRMCI 157
>gi|169206246 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 261
Score = 30.8 bits (68), Expect = 0.51
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 18 HVHVDRDAYMEVHV---ICVSVCVHVCVLVQTQVCGCASVCVCSIIPA 62
HV++ YM HV +CV V +++ V V +C C V +C I A
Sbjct: 43 HVYI----YMYTHVYIYMCVYVYIYIYVCVYVYICMCICVYICMYICA 86
Score = 30.8 bits (68), Expect = 0.51
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 18 HVHVDRDAYMEVHV-------ICVSVCVHVCVLVQTQVCGCASVCVC 57
HV++ Y+ +++ IC+ +CV++C+ + V A +C+C
Sbjct: 51 HVYIYMCVYVYIYIYVCVYVYICMCICVYICMYICAYVYIHAHMCIC 97
Score = 30.4 bits (67), Expect = 0.67
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLV--QTQVCGCASVCVCSII 60
++H+ Y+ +H+ CV + +H+C+ V T V C +C+ I
Sbjct: 107 YIHIHMCVYIHIHM-CVRIHIHMCICVYTHTYVHMCIYTYICAYI 150
Score = 30.0 bits (66), Expect = 0.87
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 4 VCADMPSARDLCVG-HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGC 51
+CA + +C+ + H Y+ +H+ CV + +H+CV + +C C
Sbjct: 84 ICAYVYIHAHMCICVYTHTYVHVYIHIHM-CVYIHIHMCVRIHIHMCIC 131
>gi|239742373 PREDICTED: hypothetical protein XP_002342505 [Homo
sapiens]
Length = 213
Score = 30.8 bits (68), Expect = 0.51
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 18 HVHVDRDAYMEVHV-ICVSVCV--HVCVLVQTQVCGCASVCV 56
++HV Y+ ++ +CV +CV HVCV + C +CV
Sbjct: 152 YIHVCIHVYIHIYTHVCVYICVYTHVCVYICVYTHVCVYICV 193
Score = 27.3 bits (59), Expect = 5.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 18 HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCG--CASVCVCSII 60
++H+ YM ++ + + VC+HV + + T VC C VC I
Sbjct: 136 YIHICIYIYMYFYIYVYIHVCIHVYIHIYTHVCVYICVYTHVCVYI 181
>gi|239508905 PREDICTED: hypothetical protein [Homo sapiens]
Length = 291
Score = 30.8 bits (68), Expect = 0.51
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 18 HVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCVCSIIPAPLAPDLFLSPR 73
H++V Y+ ++V +CV + + +CV + V C VCV I + +L+ R
Sbjct: 109 HIYVYVCVYIHIYVYVCVYIHICICVYIYIYVYMCVYVCVYMCIYVYMCQTYYLALR 165
Score = 30.0 bits (66), Expect = 0.87
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 32 ICVSVCVHVCVLVQTQVCGCASVCVCSII 60
+CV + ++VCV + VC C + VC I
Sbjct: 1 MCVYIHIYVCVCIHIYVCVCIHIYVCVCI 29
>gi|169168037 PREDICTED: hypothetical protein [Homo sapiens]
Length = 246
Score = 30.4 bits (67), Expect = 0.67
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 19 VHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASV 54
+HV Y+ V++ CV V V++CV V +C C ++
Sbjct: 148 IHVYMHTYVHVYM-CVCVHVYMCVCVHVYMCVCEAI 182
Score = 29.6 bits (65), Expect = 1.1
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 21/63 (33%)
Query: 15 CVGHVHVDRDAYMEVHVICV----SVCVHV----------CVLVQTQVCGCAS--VCVCS 58
CV ++HV YM +C+ VC+HV CV V +C C +CVC
Sbjct: 126 CV-YIHV----YMYTLYVCIYVYMCVCIHVYMHTYVHVYMCVCVHVYMCVCVHVYMCVCE 180
Query: 59 IIP 61
IP
Sbjct: 181 AIP 183
>gi|239751568 PREDICTED: hypothetical protein [Homo sapiens]
Length = 307
Score = 30.0 bits (66), Expect = 0.87
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 14 LCVGHVHVDRDAYMEVHVICVSVCVHVCV--LVQTQVCGCASVCV 56
+C+ V++ YM ++ IC+ +HVCV + T + C +C+
Sbjct: 157 ICISSVYIHIYTYMYMY-ICIYTYIHVCVHMYICTDIHMCVYICI 200
>gi|239749590 PREDICTED: similar to serine/threonine-protein kinase,
putative, partial [Homo sapiens]
Length = 223
Score = 30.0 bits (66), Expect = 0.87
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVC 49
H+ V Y+ +H ICV + +H+CV + T +C
Sbjct: 86 HICVYMYIYVYIH-ICVYMYIHICVYMYTHIC 116
Score = 26.6 bits (57), Expect = 9.6
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 18 HVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCV 56
+V++ YM +H ICV + H+CV + C + V
Sbjct: 94 YVYIHICVYMYIH-ICVYMYTHICVYIYVYTHMCVYIYV 131
>gi|239752244 PREDICTED: hypothetical protein XP_002348172 [Homo
sapiens]
Length = 81
Score = 29.6 bits (65), Expect = 1.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 13/46 (28%)
Query: 18 HVHVDRDAYMEVHVICVS-------VCVHVCVLVQTQVCGCASVCV 56
+VH+ YM +H+ + VC H+CV V T C C +CV
Sbjct: 24 YVHI----YMYIHMCMYTYMCRYTCVCTHICVYVYT--CVCTHICV 63
>gi|239747025 PREDICTED: hypothetical protein XP_002343908 [Homo
sapiens]
Length = 81
Score = 29.6 bits (65), Expect = 1.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 13/46 (28%)
Query: 18 HVHVDRDAYMEVHVICVS-------VCVHVCVLVQTQVCGCASVCV 56
+VH+ YM +H+ + VC H+CV V T C C +CV
Sbjct: 24 YVHI----YMYIHMCMYTYMCRYTCVCTHICVYVYT--CVCTHICV 63
>gi|169210737 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 29.6 bits (65), Expect = 1.1
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 14 LCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCV 56
+C+ +V++ YM ++V + +CV++C+ V +C +CV
Sbjct: 130 MCI-YVYIHICVYMCIYVY-IHICVYMCIYVYIHICVYVYICV 170
Score = 28.5 bits (62), Expect = 2.5
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 14 LCVGHVHVDRDAYMEVHVICVSVCVHVCVLVQTQVCGCASVCVCSI 59
+C+ +V++ YM ++V + +C++V + V T +C C +C I
Sbjct: 39 MCI-YVYICVYTYMCIYVY-IHMCIYVYICVYTYMCICVYICYIHI 82
Score = 27.7 bits (60), Expect = 4.3
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 14 LCVGHVHVDRDAYMEVHV-ICVSVCVHVCVLVQTQVCGCASVCV 56
+C+ +V++ YM ++V ICV +C+++ V + +C +CV
Sbjct: 86 MCI-YVYICVYTYMCIYVYICVYMCIYIYVYICVYMCIYVYICV 128
Score = 27.3 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 32 ICVSVCVHVCVLVQTQVCGCASVCV 56
ICV +C++V + V T +C +CV
Sbjct: 82 ICVYMCIYVYICVYTYMCIYVYICV 106
Score = 27.3 bits (59), Expect = 5.6
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 14 LCVGHVHVDRDAYMEVHV---ICVSVCVHVCVLVQTQVCGCASVCV 56
+CV +V++ YM ++V ICV +C+++ V + +C VCV
Sbjct: 162 ICV-YVYICVYTYMCIYVYIHICVYMCIYIYVYICVYMCIYIYVCV 206
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.141 0.487
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,763,887
Number of Sequences: 37866
Number of extensions: 395653
Number of successful extensions: 1653
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1258
Number of HSP's gapped (non-prelim): 337
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.