Search of human proteins with 239745230

Search of human proteins with 239745230

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745230 PREDICTED: hypothetical protein XP_002343393 [Homo
sapiens]
         (122 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745230 PREDICTED: hypothetical protein XP_002343393 [Homo ...   266   3e-72
gi|239756295 PREDICTED: hypothetical protein [Homo sapiens]           138   1e-33
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         35   0.018
gi|169160624 PREDICTED: hypothetical protein [Homo sapiens]            32   0.090
gi|188536004 zinc finger protein 469 [Homo sapiens]                    30   0.34 
gi|239757193 PREDICTED: hypothetical protein [Homo sapiens]            30   0.58 
gi|239751700 PREDICTED: hypothetical protein XP_002347968 [Homo ...    30   0.58 
gi|239744733 PREDICTED: hypothetical protein XP_002343257 [Homo ...    30   0.58 
gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo sapi...    29   1.00 
gi|54112394 calcium channel, voltage-dependent, alpha 2/delta su...    29   1.00 
gi|54112392 calcium channel, voltage-dependent, alpha 2/delta su...    29   1.00 
gi|14149712 C1q and tumor necrosis factor related protein 5 prec...    29   1.00 
gi|66472382 nischarin [Homo sapiens]                                   29   1.00 
gi|148833508 notch1 preproprotein [Homo sapiens]                       28   1.3  
gi|239746204 PREDICTED: hypothetical protein XP_002343661 [Homo ...    28   1.3  
gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo ...    28   1.3  
gi|23463326 POU domain class 5, transcription factor 2 [Homo sap...    28   1.3  
gi|61744467 low density lipoprotein receptor-related protein 8 i...    28   1.7  
gi|194353976 transcription factor AP-2 epsilon (activating enhan...    28   1.7  
gi|118582284 msh homeobox 1 [Homo sapiens]                             28   2.2  
gi|224465238 hypothetical protein LOC283999 [Homo sapiens]             27   2.9  
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          27   2.9  
gi|214830451 sequestosome 1 isoform 2 [Homo sapiens]                   27   2.9  
gi|214830438 sequestosome 1 isoform 2 [Homo sapiens]                   27   2.9  
gi|4505571 sequestosome 1 isoform 1 [Homo sapiens]                     27   2.9  
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]         27   2.9  
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       27   2.9  
gi|149944524 hypothetical protein LOC400591 [Homo sapiens]             27   2.9  
gi|239754993 PREDICTED: hypothetical protein [Homo sapiens]            27   3.8  
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ...    27   3.8  

>gi|239745230 PREDICTED: hypothetical protein XP_002343393 [Homo
           sapiens]
          Length = 122

 Score =  266 bits (680), Expect = 3e-72
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MLGLELLTAPVPALGNRRTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAAS 60
           MLGLELLTAPVPALGNRRTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAAS
Sbjct: 1   MLGLELLTAPVPALGNRRTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAAS 60

Query: 61  TCFQWPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRSSCL 120
           TCFQWPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRSSCL
Sbjct: 61  TCFQWPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRSSCL 120

Query: 121 PG 122
           PG
Sbjct: 121 PG 122


>gi|239756295 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 117

 Score =  138 bits (347), Expect = 1e-33
 Identities = 60/60 (100%), Positives = 60/60 (100%)

Query: 63  FQWPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRSSCLPG 122
           FQWPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRSSCLPG
Sbjct: 58  FQWPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRSSCLPG 117


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 34.7 bits (78), Expect = 0.018
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 8/86 (9%)

Query: 32  GPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRPFWLGRYTLP 91
           GP + GS+    ++  H    P+   A +     PG R    AP    PRP        P
Sbjct: 291 GPERKGSAPPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRP--------P 342

Query: 92  TLRRPCCAPFRSPPGGGVSELRTGRS 117
                 C P   PPG  + E R  RS
Sbjct: 343 GAESHGCLPATRPPGSDLRESRVQRS 368


>gi|169160624 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 284

 Score = 32.3 bits (72), Expect = 0.090
 Identities = 32/93 (34%), Positives = 36/93 (38%), Gaps = 8/93 (8%)

Query: 27  GGMQLGPSQGGSSRGAL--EQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRPFW 84
           GG+ +GPS GG   GA        G      R  A      PG R  GGA  P  P P  
Sbjct: 130 GGVSMGPSPGGKDGGAFIWGGARAGGGEALTRKRARG-GAVPGDRPGGGAASPL-PAPLL 187

Query: 85  LGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRS 117
             R       R  CAP  +  G G S LR  R+
Sbjct: 188 ASR----PRPRGRCAPDGAQAGVGASRLRRRRA 216


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 30.4 bits (67), Expect = 0.34
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 17/57 (29%)

Query: 74  APGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRT---------GRSSCLP 121
           APGP   R        LP L  P  AP+ +PPGG ++  R+         G+  CLP
Sbjct: 429 APGPPPAR--------LPQLWDPTAAPYPTPPGGPLAATRSMFFNGQPSPGQRLCLP 477


>gi|239757193 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 397

 Score = 29.6 bits (65), Expect = 0.58
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 15  GNRRTKTICPFPGGMQLGPSQGGSSRG----ALEQLMHGYNAPFCR 56
           G R   T C   GG  +GP  GG   G    A  Q +H  ++P CR
Sbjct: 348 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCR 393


>gi|239751700 PREDICTED: hypothetical protein XP_002347968 [Homo
           sapiens]
          Length = 215

 Score = 29.6 bits (65), Expect = 0.58
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 15  GNRRTKTICPFPGGMQLGPSQGGSSRG----ALEQLMHGYNAPFCR 56
           G R   T C   GG  +GP  GG   G    A  Q +H  ++P CR
Sbjct: 166 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCR 211


>gi|239744733 PREDICTED: hypothetical protein XP_002343257 [Homo
           sapiens]
          Length = 659

 Score = 29.6 bits (65), Expect = 0.58
 Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 15/111 (13%)

Query: 17  RRTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQ---WPGVRAAGG 73
           RR +  CP  G + LGP+   ++   L Q + G + P    A     Q   W     +G 
Sbjct: 527 RRLRPPCPPFGPLALGPAGPSAALRLLSQQLQGESGPDQDSAGPVLGQSLAWRWAARSGV 586

Query: 74  APGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPG--GGVSELRTGRSSCLPG 122
             G +  +P   GR    T RR     FR+ PG  GG    R G  +  PG
Sbjct: 587 VGGGWRSQPHATGR----TPRR----LFRASPGISGGCWPRRCG--AAFPG 627


>gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo
           sapiens]
          Length = 267

 Score = 28.9 bits (63), Expect = 1.00
 Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 28  GMQLGPSQGGSSRGA--LEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRPFWL 85
           G+   P  GG +     L  L  G      R + +  F      AAG    P+ P P   
Sbjct: 43  GVDAMPHWGGQTLEGEWLRPLHPGAEGSQTRPSGAPQFTTLLALAAGSPWRPWRPGPALA 102

Query: 86  GRYTLPTLRRPCCAPFRSPPGGGVSELRTG 115
           G    P      CAP   PPG G+ + R G
Sbjct: 103 GALRFPGAHGRLCAP--PPPGLGLGQGRAG 130


>gi|54112394 calcium channel, voltage-dependent, alpha 2/delta
           subunit 2 isoform b [Homo sapiens]
          Length = 1143

 Score = 28.9 bits (63), Expect = 1.00
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 10/53 (18%)

Query: 59  ASTCFQWPGVRAAGGAPGPYS-------PRPFWLGRYTLPTLRRPCCAPFRSP 104
           A T   WPG    G  PGP +       PRP WL    LP L  P  + +  P
Sbjct: 16  ARTARPWPG---CGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYSFP 65


>gi|54112392 calcium channel, voltage-dependent, alpha 2/delta
           subunit 2 isoform a [Homo sapiens]
          Length = 1145

 Score = 28.9 bits (63), Expect = 1.00
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 10/53 (18%)

Query: 59  ASTCFQWPGVRAAGGAPGPYS-------PRPFWLGRYTLPTLRRPCCAPFRSP 104
           A T   WPG    G  PGP +       PRP WL    LP L  P  + +  P
Sbjct: 16  ARTARPWPG---CGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYSFP 65


>gi|14149712 C1q and tumor necrosis factor related protein 5
          precursor [Homo sapiens]
          Length = 243

 Score = 28.9 bits (63), Expect = 1.00
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 7  LTAPVPALGNRRTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWP 66
          L A  P L + +  ++CP   G+   P   GS      Q + G +    RD A      P
Sbjct: 12 LAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGS------QGLPGRDGRDGRDGAPGA---P 62

Query: 67 GVRAAGGAPGPYSPR 81
          G +  GG PG   PR
Sbjct: 63 GEKGEGGRPGLPGPR 77


>gi|66472382 nischarin [Homo sapiens]
          Length = 1504

 Score = 28.9 bits (63), Expect = 1.00
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 43  LEQLMHGYN-APFCRDAASTCFQ----WPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRPC 97
           L QL+  Y  A  C++ +  CF     +   R    A G YS    W        +RR C
Sbjct: 835 LRQLLTFYKVAGGCQERSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSC 894

Query: 98  CAP 100
           CAP
Sbjct: 895 CAP 897


>gi|148833508 notch1 preproprotein [Homo sapiens]
          Length = 2555

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 50  YNAPFCRDAASTCFQWPGVRAAGGA----PGPYSPRPFWLGRYTLPTLRRPC--CAPFRS 103
           ++ P CR   + C Q PG+   GG      G Y  R      +T P   RP   C+P   
Sbjct: 170 FHGPTCRQDVNECGQKPGLCRHGGTCHNEVGSY--RCVCRATHTGPNCERPYVPCSPSPC 227

Query: 104 PPGGGVSELR--TGRSSCLPG 122
             GG        T   +CLPG
Sbjct: 228 QNGGTCRPTGDVTHECACLPG 248


>gi|239746204 PREDICTED: hypothetical protein XP_002343661 [Homo
           sapiens]
          Length = 194

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 15  GNRRTKTICPFPGGMQLGPSQGGSSRGA----LEQLMHGYNAPFCR 56
           G R   T C   GG  +GP  GG   G+      Q +H  ++P CR
Sbjct: 145 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYTAPQSLHCTDSPHCR 190


>gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo
          sapiens]
          Length = 130

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 10/60 (16%)

Query: 26 PGGMQLGPSQGG-SSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRPFW 84
          P G    P+  G S R  L     G   P C         WPG RAA  AP P +PRP W
Sbjct: 44 PDGRAAQPTPLGLSRRSLLGASPRGAPRPQCG--------WPGHRAAARAPLP-TPRPPW 94


>gi|23463326 POU domain class 5, transcription factor 2 [Homo
           sapiens]
          Length = 328

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 16/112 (14%)

Query: 15  GNRRTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGA 74
           G+R +   CP PG        GG  RG +   +        + A      WP VR  G  
Sbjct: 3   GHRPSNHFCPLPGS------GGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVR-PGIC 55

Query: 75  PGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSE----LRTGRSSCLPG 122
           PGP   R   +    LP   R   AP R  P  G SE    LR      LPG
Sbjct: 56  PGPDVWR---IPLGPLPHEFRGWIAPCR--PRLGASEAGDWLRRPSEGALPG 102


>gi|61744467 low density lipoprotein receptor-related protein 8
           isoform 3 precursor [Homo sapiens]
          Length = 700

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 16/47 (34%), Positives = 18/47 (38%)

Query: 3   GLELLTAPVPALGNRRTKTICPFPGGMQLGPSQGGSSRGALEQLMHG 49
           G E L  P P + +   K  C  P  M LGP      R A E    G
Sbjct: 570 GCEYLCLPAPQISSHSPKYTCACPDTMWLGPDMKRCYRDANEDSKMG 616


>gi|194353976 transcription factor AP-2 epsilon (activating
          enhancer binding protein 2 epsilon) [Homo sapiens]
          Length = 442

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 8/53 (15%)

Query: 31 LGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRPF 83
          LG + GG+   +L Q  +G   P C   A+T        AA     PY P P+
Sbjct: 15 LGAAAGGARLSSLPQAAYGPAPPLCHTPAAT--------AAAEFQPPYFPPPY 59


>gi|118582284 msh homeobox 1 [Homo sapiens]
          Length = 303

 Score = 27.7 bits (60), Expect = 2.2
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 42  ALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRPFWLGRYTLPTLRRP 96
           ++E LM  +  P  +++A    +  GV+AAGG+  P    P  LG    P+  RP
Sbjct: 62  SVEALMADHRKPGAKESALAPSE--GVQAAGGSAQPLGVPPGSLGAPDAPSSPRP 114


>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
          Length = 394

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 26/90 (28%), Positives = 29/90 (32%), Gaps = 10/90 (11%)

Query: 18  RTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGP 77
           R  T  PFP G    P +GG    A      G     C   +    +  G R A   P P
Sbjct: 102 RLSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQ----CAGRSGDVLRRAGRRRARPPPVP 157

Query: 78  YSPRPFWLGRYTLPTLRRPCCAPFRSPPGG 107
             P P        P   R    P  SPP G
Sbjct: 158 RLPAP------RAPRRPRGPATPDPSPPAG 181


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 9/59 (15%)

Query: 24  PFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRP 82
           P  GG+   P  GG+   +   L+          + S     P  RA GG PG  SP P
Sbjct: 122 PLSGGLSPDPKPGGAPTSSRRPLL---------SSPSWGGPEPEGRAGGGIPGSSSPHP 171


>gi|214830451 sequestosome 1 isoform 2 [Homo sapiens]
          Length = 356

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 17/64 (26%)

Query: 19  TKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPY 78
           TK   P P G     S+G S    L ++ HG+            F WPG     G PG +
Sbjct: 80  TKLAFPSPFGHL---SEGFSHSRWLRKVKHGH------------FGWPGWEM--GPPGNW 122

Query: 79  SPRP 82
           SPRP
Sbjct: 123 SPRP 126


>gi|214830438 sequestosome 1 isoform 2 [Homo sapiens]
          Length = 356

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 17/64 (26%)

Query: 19  TKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPY 78
           TK   P P G     S+G S    L ++ HG+            F WPG     G PG +
Sbjct: 80  TKLAFPSPFGHL---SEGFSHSRWLRKVKHGH------------FGWPGWEM--GPPGNW 122

Query: 79  SPRP 82
           SPRP
Sbjct: 123 SPRP 126


>gi|4505571 sequestosome 1 isoform 1 [Homo sapiens]
          Length = 440

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 17/64 (26%)

Query: 19  TKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPY 78
           TK   P P G     S+G S    L ++ HG+            F WPG     G PG +
Sbjct: 164 TKLAFPSPFGHL---SEGFSHSRWLRKVKHGH------------FGWPGWEM--GPPGNW 206

Query: 79  SPRP 82
           SPRP
Sbjct: 207 SPRP 210


>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
          Length = 261

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 5/57 (8%)

Query: 64  QWPGVRAAGG----APGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGR 116
           Q PG R   G    AP P  P P  LG    P   RP C P R  P      LR  R
Sbjct: 43  QLPGARRGPGPRRPAPLPARP-PGALGSVLRPLRARPGCRPRRPHPAARCLPLRPHR 98


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 8    TAPVPALGNRRTKTICPFPGGMQLGPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPG 67
            TAP+P  G +   +  PF G  + GP   G S       +HG N P  R  A   F    
Sbjct: 1733 TAPLPPPGQKVGGSQPPFQGQREPGPHALGMSG------LHGPNFPGPRGPAPP-FPEEN 1785

Query: 68   VRAAGGAPGPYSPRPFWLGRYTLPTL 93
            + +  G  GP  P  F   +  +P+L
Sbjct: 1786 IASNDGPRGP-PPARFGAQKGPIPSL 1810


>gi|149944524 hypothetical protein LOC400591 [Homo sapiens]
          Length = 167

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 17/104 (16%)

Query: 24  PFPGGMQLGPSQGGSSRGALEQLMHGY-------NAPFCR----DAASTCFQWPGVRAAG 72
           P   G ++GP+  G     L QL           + PF R      A   F     R AG
Sbjct: 9   PASAGTRMGPASCGGRSLHLPQLRFSRVDATAVTDVPFQRMHAPHRAPEVFCSRSSRGAG 68

Query: 73  -GAPGPYSPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTG 115
            G P P +PR  W      P     CCA   S  GG  ++LR G
Sbjct: 69  RGHPTP-TPRVRWALAGNQPR----CCAQLLSGRGGSGAQLRAG 107


>gi|239754993 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 221

 Score = 26.9 bits (58), Expect = 3.8
 Identities = 26/103 (25%), Positives = 35/103 (33%), Gaps = 7/103 (6%)

Query: 22  ICPFPGGMQLG---PSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPY 78
           + PFP   Q     PS   S   +     H +  P     A    +WP  + +  +PGP 
Sbjct: 111 LSPFPHTHQSPLAIPSPSASPPPSCAPAPHSHPPPIGLALACKSRRWPRAQPSRMSPGP- 169

Query: 79  SPRPFWLGRYTLPTLRRPCCAPFRSPPGGGVSELRTGRSSCLP 121
              P W  R +   L RP     R       S   +    CLP
Sbjct: 170 ---PLWERRQSYWPLTRPLGPRARQAFESTCSSPESRPRPCLP 209


>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
           sapiens]
          Length = 229

 Score = 26.9 bits (58), Expect = 3.8
 Identities = 29/81 (35%), Positives = 30/81 (37%), Gaps = 9/81 (11%)

Query: 32  GPSQGGSSRGALEQLMHGYNAPFCRDAASTCFQWPGVRAAGGAPGPYSPRPFWLGRYTLP 91
           GP QGG+ R        G      R     C    G R AGGA  P SPR     R   P
Sbjct: 8   GPHQGGTPRPLPASA--GAQGSQARSGLRLCRTTQG-RPAGGASPPPSPR----SRPEGP 60

Query: 92  TLRRPCCAPFRSPPG--GGVS 110
              RP     R P G   GVS
Sbjct: 61  GPPRPATPSARRPQGLSAGVS 81


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.142    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,792,210
Number of Sequences: 37866
Number of extensions: 394013
Number of successful extensions: 1252
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 1222
Number of HSP's gapped (non-prelim): 95
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.