MSX1 2186

Name: MSX1	Sequence: fasta or formatted (303aa)		NCBI GI: 118582284
Description: msh homeobox 1		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.5 53 4 C cysteine 0.3 1 1 D aspartate 2.0 6 1 E glutamate 5.6 17 2 F phenylalanine 3.6 11 1 G glycine 8.6 26 3 H histidine 1.7 5 1 I isoleucine 0.7 2 1 K lysine 6.6 20 1 L leucine 10.2 31 2 M methionine 2.6 8 1 N asparagine 0.7 2 1 P proline 11.9 36 3 Q glutamine 3.6 11 1 R arginine 5.3 16 2 S serine 8.6 26 3 T threonine 4.0 12 2 V valine 4.3 13 1 W tryptophan 0.7 2 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 msh homeobox 1 MSX2 0.423 msh homeobox 2 DLX2 0.122 distal-less homeobox 2 NKX1-2 0.120 NK1 homeobox 2 NKX1-2 0.120 PREDICTED: NK1 homeobox 2 NKX1-2 0.120 PREDICTED: NK1 homeobox 2 NKX1-2 0.120 PREDICTED: NK1 homeobox 2 DLX4 0.111 distal-less homeobox 4 isoform a NKX2-5 0.108 NK2 transcription factor related, locus 5 NKX2-6 0.106 NK2 transcription factor related, locus 6 RAX 0.106 retina and anterior neural fold homeobox TLX1 0.104 T-cell leukemia homeobox 1 EMX1 0.103 empty spiracles homolog 1 DLX1 0.101 distal-less homeobox 1 isoform 1 NKX1-1 0.099 PREDICTED: NK1 homeobox 1 NKX2-3 0.099 NK2 transcription factor related, locus 3 MNX1 0.099 homeo box HB9 DLX4 0.099 distal-less homeobox 4 isoform b BSX 0.099 brain specific homeobox TLX2 0.099 T-cell leukemia homeobox 2 HMX3 0.097 H6 family homeobox 3 NKX1-1 0.097 PREDICTED: HPX-153 homeobox TLX3 0.097 T-cell leukemia homeobox 3 HMX2 0.097 H6 family homeobox 2 DLX5 0.096 distal-less homeobox 5 NKX6-2 0.096 NK6 transcription factor related, locus 2 DLX6 0.096 distal-less homeobox 6 HMX1 0.096 homeo box (H6 family) 1 HOXB2 0.096 homeobox B2 DLX3 0.094 distal-less homeobox 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.