Guide to the Human Genome
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Name: TFAP2E Sequence: fasta or formatted (442aa) NCBI GI: 194353976
Description:

transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.4         68           4
 C cysteine            2.0          9           1
 D aspartate           3.8         17           1
 E glutamate           5.0         22           2
 F phenylalanine       2.5         11           1
 G glycine             9.3         41           2
 H histidine           2.9         13           1
 I isoleucine          1.8          8           1
 K lysine              4.5         20           2
 L leucine            13.6         60           2
 M methionine          1.6          7           1
 N asparagine          1.6          7           1
 P proline            10.4         46           3
 Q glutamine           3.4         15           1
 R arginine            5.4         24           2
 S serine              7.0         31           2
 T threonine           3.2         14           1
 V valine              3.8         17           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription factor AP-2 epsilon (activating enhan... 
TFAP2B                0.552   transcription factor AP-2 beta 
TFAP2A                0.544   transcription factor AP-2 alpha isoform b 
TFAP2A                0.528   transcription factor AP-2 alpha isoform c 
TFAP2A                0.528   transcription factor AP-2 alpha isoform a 
TFAP2C                0.425   transcription factor AP-2 gamma 
TFAP2D                0.346   transcription factor AP-2 beta-like 1 
PRR22                 0.030   proline rich 22 isoform 1 
PRR22                 0.030   proline rich 22 isoform 2 
SAMD1                 0.030   sterile alpha motif domain containing 1 
CITED4                0.029   Cbp/p300-interacting transactivator, with Glu/Asp-ri...
TAF4                  0.029   TBP-associated factor 4 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
MAPK1IP1L             0.027   MAPK-interacting and spindle-stabilizing protein [Ho...
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.025   PREDICTED: hypothetical protein LOC80164 
HCN4                  0.024   hyperpolarization activated cyclic nucleotide-gated p...
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 2 
HCN2                  0.023   hyperpolarization activated cyclic nucleotide-gated...
GRINA                 0.022   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.022   glutamate receptor, ionotropic, N-methyl D-aspartate...
PELP1                 0.022   proline, glutamic acid and leucine rich protein 1 [...
RAX                   0.020   retina and anterior neural fold homeobox 
PHC1                  0.020   polyhomeotic 1-like 
LMTK3                 0.020   lemur tyrosine kinase 3 
C7orf51               0.020   hypothetical protein FLJ37538 
FOXI3                 0.020   forkhead box I3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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