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Search of human proteins with 239745038
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo
sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo ... 518 e-147
gi|169207534 PREDICTED: hypothetical protein [Homo sapiens] 348 3e-96
gi|169207799 PREDICTED: hypothetical protein [Homo sapiens] 183 1e-46
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 55 6e-08
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 55 6e-08
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 55 6e-08
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 55 6e-08
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 53 2e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 4e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 52 4e-07
gi|116284392 mucin 2 precursor [Homo sapiens] 52 6e-07
gi|55741677 SET domain containing 1A [Homo sapiens] 51 8e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 51 8e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 2e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 49 4e-06
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 47 1e-05
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 46 3e-05
gi|47132519 Ras association and pleckstrin homology domains 1 is... 46 3e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 46 3e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 46 3e-05
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 45 6e-05
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 45 6e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens] 44 1e-04
gi|24497460 Shaw-related voltage-gated potassium channel protein... 44 1e-04
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 44 1e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 44 1e-04
gi|236459851 ubinuclein 2 [Homo sapiens] 44 2e-04
>gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo
sapiens]
Length = 244
Score = 518 bits (1335), Expect = e-147
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRD 60
MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRD
Sbjct: 1 MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRD 60
Query: 61 HLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA 120
HLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA
Sbjct: 61 HLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA 120
Query: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP
Sbjct: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
Query: 181 PTPQRLHPCGLQTHRGVFIPVGYRRTAASSSLWVTDAQTHRGVFIPVGYRRTAASSSLWQ 240
PTPQRLHPCGLQTHRGVFIPVGYRRTAASSSLWVTDAQTHRGVFIPVGYRRTAASSSLWQ
Sbjct: 181 PTPQRLHPCGLQTHRGVFIPVGYRRTAASSSLWVTDAQTHRGVFIPVGYRRTAASSSLWQ 240
Query: 241 SMDT 244
SMDT
Sbjct: 241 SMDT 244
>gi|169207534 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 348 bits (892), Expect = 3e-96
Identities = 166/175 (94%), Positives = 166/175 (94%)
Query: 1 MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRD 60
MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPT QLPPRIPGPPTTRQPPRV D
Sbjct: 1 MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTSQLPPRIPGPPTTRQPPRVPD 60
Query: 61 HLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA 120
HLHLSCPRAS DRPRPSCPLAS DRRRPAIPRASPDRPRPISPAPPGPPTSRQ PRISVA
Sbjct: 61 HLHLSCPRASPDRPRPSCPLASPDRRRPAIPRASPDRPRPISPAPPGPPTSRQPPRISVA 120
Query: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPR 175
AAPVLPA PRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARS LGE AA FRFPR
Sbjct: 121 AAPVLPAPPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSWLGEAAAAFRFPR 175
>gi|169207799 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 183 bits (464), Expect = 1e-46
Identities = 96/146 (65%), Positives = 100/146 (68%), Gaps = 27/146 (18%)
Query: 1 MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRD 60
MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPT QLPPRIPGPPTTRQPPRV D
Sbjct: 1 MDRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTSQLPPRIPGPPTTRQPPRVPD 60
Query: 61 HLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA 120
HLHLSCPRAS DRPRPSCPLAS PI+ PP P R + V
Sbjct: 61 HLHLSCPRASPDRPRPSCPLAS-----------------PIADVPPSPARPRTA---HVP 100
Query: 121 AAPVLPAAPRPPTQR-------RCVP 139
+AP LP P P + R RC P
Sbjct: 101 SAPRLPDRPLPDSPRASLWQLPRCFP 126
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQ 71
P++ A +P+ TP+ P T + P P+ P P TT+ P + +++
Sbjct: 353 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 412
Query: 72 DRPRPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQ-SPRISVAAAPVLP 126
P+ P +++ P P+ +P +P P +P P P T ++ +P + AP P
Sbjct: 413 TTPKEPSPTTTKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTP 471
Query: 127 AAPRPPTQRRCVPVAQRGL 145
P P T + P + L
Sbjct: 472 KEPAPTTPKETAPTTPKKL 490
Score = 48.9 bits (115), Expect = 4e-06
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 31 TPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRR 86
TP+ P T + P P+ P P TT++P + P+ P P+ P +
Sbjct: 258 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK----EPAPTTP----KKP 309
Query: 87 RPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQ 142
P P+ +P P P +P P P T +P AP P P P T + P
Sbjct: 310 APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 369
Query: 143 R 143
+
Sbjct: 370 K 370
Score = 47.4 bits (111), Expect = 1e-05
Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 19/182 (10%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQP-PRVRDHLHLSCPR----AS 70
P+E A +P+ TP+ P T P+ P P TT++P P + P+ +
Sbjct: 431 PKEPAPTTPKKPAPTTPKEPAPTT----PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 486
Query: 71 QDRPRPSCP--LASRDRRRPA------IPRASPDRPRPISPAPPGPPTSR-QSPRISVAA 121
+ P+ P LA +PA + +P+ P P +P P P T + +P
Sbjct: 487 PKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEP 546
Query: 122 APVLPAAPRPPTQRRCVPVA-QRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P G T + + AP K
Sbjct: 547 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE 606
Query: 181 PT 182
PT
Sbjct: 607 PT 608
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 14 AWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
A P KA+ + + L TP+ P TPT P+ P T ++P P +
Sbjct: 195 AKPTPKAETTTKGPALTTPKEP-TPT---TPKEPASTTPKEP----------TPTTIKSA 240
Query: 74 P-RPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAA 128
P P P + + P P+ + P P +P P P T+++ + +AP P
Sbjct: 241 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 300
Query: 129 PRPPTQRRCVPVAQR 143
P P T ++ P +
Sbjct: 301 PAPTTPKKPAPTTPK 315
Score = 44.7 bits (104), Expect = 8e-05
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQ---LPPRIPGPPTTRQPPRV-RDHLHLSCPRASQ 71
P+E +P+ TP+ P T + P+ P P TT+ P ++ + +
Sbjct: 213 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 272
Query: 72 DRPRPSCPLASRDRRRPAIPRA--SPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
P+ P +++ A +P P P +P P P T ++ AP P P
Sbjct: 273 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-------APTTPKEP 325
Query: 130 RPPTQRRCVPVAQRGLP 146
P T + P + P
Sbjct: 326 TPTTPKEPAPTTKEPAP 342
Score = 44.3 bits (103), Expect = 1e-04
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 16 PEEKADLSPRPRFLATPR---------VPGTPTYQLP--PRIPGPPTTRQPPRV--RDHL 62
P+E A +P+ TP+ P TP P P+ P P T ++P ++
Sbjct: 314 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 373
Query: 63 HLSCPRASQDRPRPSCPLASRDR-RRPAIPRASPDRPRPISPAPPGPPTSRQ-SPRISVA 120
+ S P+ P ++ P + + P +P P P T+++ +P
Sbjct: 374 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 433
Query: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P T T++PA + E A P+ E P
Sbjct: 434 PAPTTPKKPAPTTPKEPAPTTPKE-PAPTT-----TKKPAPTTPKEPAP--TTPK-ETAP 484
Query: 181 PTPQRLHP 188
TP++L P
Sbjct: 485 TTPKKLTP 492
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPR 75
PEE A +P+ TP+ P T P+ P P T ++P + P+
Sbjct: 527 PEEPAPTTPKAAAPNTPKEPAPTT----PKEPAPTTPKEPAPTTPK------ETAPTTPK 576
Query: 76 PSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTS----RQSPRISVAAAPVLPAAPRP 131
+ P ++ PA P+ ++P PTS + +P AP P P P
Sbjct: 577 GTAPTTLKE---PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 633
Query: 132 PTQRRCVPVAQRG 144
T + P +G
Sbjct: 634 TTPKEPAPTTPKG 646
Score = 42.4 bits (98), Expect = 4e-04
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 25/184 (13%)
Query: 16 PEEKADLSPRPRFLATPR--VPGTPTYQLPPRIPGP-PTTRQPPRVRDHLHLSCPRASQ- 71
P+E A +P+ TP+ P TP P + P PTT + P ++ + +
Sbjct: 551 PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTST 610
Query: 72 --DRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
D+P P+ P + +P P P +P P P T + + ++ P P
Sbjct: 611 TCDKPAPTTPKGTAP--------TTPKEPAPTTPKEPAPTTPKGTAPTTLKEP--APTTP 660
Query: 130 RPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQRLHPC 189
+ P + P +G P T + +PA + ETA P+ E P TP++ P
Sbjct: 661 KKPAPKELAPTTTKG-PTSTT-----SDKPAPTTPKETAP--TTPK-EPAPTTPKKPAPT 711
Query: 190 GLQT 193
+T
Sbjct: 712 TPET 715
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 24/130 (18%)
Query: 21 DLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
DL+P + LA P T + P P+ P P T ++P AS P
Sbjct: 186 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEP-------------ASTTPKEP 232
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRR 136
+ P P + + P +P P P T+++ AP P P P T +
Sbjct: 233 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKE 285
Query: 137 CVPVAQRGLP 146
P + P
Sbjct: 286 PAPTTTKSAP 295
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 28/159 (17%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP-PRIPGPPTTRQ--PPRVRDHLHLSCPRASQD 72
P+E A +P+ TP+ T + P P P P ++ P ++ +C + +
Sbjct: 559 PKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPT 618
Query: 73 RPRPSCPLASRD-------RRRPAIPRASPD----RPRPISPAPPGP----------PTS 111
P+ + P ++ P P+ + P P +P P P PTS
Sbjct: 619 TPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 678
Query: 112 RQS----PRISVAAAPVLPAAPRPPTQRRCVPVAQRGLP 146
S P AP P P P T ++ P P
Sbjct: 679 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 717
Score = 34.7 bits (78), Expect = 0.078
Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 21/115 (18%)
Query: 17 EEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
++ A +P+ TP+ P T P+ P P T PP P S+
Sbjct: 682 DKPAPTTPKETAPTTPKEPAPTT----PKKPAPTTPETPP----------PTTSE----V 723
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
S P +++ P SPD P A P P SP+ PAA +P
Sbjct: 724 STPTTTKE---PTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKP 775
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQ 71
P++ A +P+ TP+ P T + P P+ P P TT+ P + +++
Sbjct: 394 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 453
Query: 72 DRPRPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQ-SPRISVAAAPVLP 126
P+ P +++ P P+ +P +P P +P P P T ++ +P + AP P
Sbjct: 454 TTPKEPSPTTTKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTP 512
Query: 127 AAPRPPTQRRCVPVAQRGL 145
P P T + P + L
Sbjct: 513 KEPAPTTPKETAPTTPKKL 531
Score = 48.9 bits (115), Expect = 4e-06
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 31 TPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRR 86
TP+ P T + P P+ P P TT++P + P+ P P+ P +
Sbjct: 299 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK----EPAPTTP----KKP 350
Query: 87 RPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQ 142
P P+ +P P P +P P P T +P AP P P P T + P
Sbjct: 351 APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 410
Query: 143 R 143
+
Sbjct: 411 K 411
Score = 47.4 bits (111), Expect = 1e-05
Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 19/182 (10%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQP-PRVRDHLHLSCPR----AS 70
P+E A +P+ TP+ P T P+ P P TT++P P + P+ +
Sbjct: 472 PKEPAPTTPKKPAPTTPKEPAPTT----PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 527
Query: 71 QDRPRPSCP--LASRDRRRPA------IPRASPDRPRPISPAPPGPPTSR-QSPRISVAA 121
+ P+ P LA +PA + +P+ P P +P P P T + +P
Sbjct: 528 PKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEP 587
Query: 122 APVLPAAPRPPTQRRCVPVA-QRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P G T + + AP K
Sbjct: 588 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE 647
Query: 181 PT 182
PT
Sbjct: 648 PT 649
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 14 AWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
A P KA+ + + L TP+ P TPT P+ P T ++P P +
Sbjct: 236 AKPTPKAETTTKGPALTTPKEP-TPT---TPKEPASTTPKEP----------TPTTIKSA 281
Query: 74 P-RPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAA 128
P P P + + P P+ + P P +P P P T+++ + +AP P
Sbjct: 282 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 341
Query: 129 PRPPTQRRCVPVAQR 143
P P T ++ P +
Sbjct: 342 PAPTTPKKPAPTTPK 356
Score = 44.7 bits (104), Expect = 8e-05
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQ---LPPRIPGPPTTRQPPRV-RDHLHLSCPRASQ 71
P+E +P+ TP+ P T + P+ P P TT+ P ++ + +
Sbjct: 254 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 313
Query: 72 DRPRPSCPLASRDRRRPAIPRA--SPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
P+ P +++ A +P P P +P P P T ++ AP P P
Sbjct: 314 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-------APTTPKEP 366
Query: 130 RPPTQRRCVPVAQRGLP 146
P T + P + P
Sbjct: 367 TPTTPKEPAPTTKEPAP 383
Score = 44.3 bits (103), Expect = 1e-04
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 16 PEEKADLSPRPRFLATPR---------VPGTPTYQLP--PRIPGPPTTRQPPRV--RDHL 62
P+E A +P+ TP+ P TP P P+ P P T ++P ++
Sbjct: 355 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 414
Query: 63 HLSCPRASQDRPRPSCPLASRDR-RRPAIPRASPDRPRPISPAPPGPPTSRQ-SPRISVA 120
+ S P+ P ++ P + + P +P P P T+++ +P
Sbjct: 415 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 474
Query: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P T T++PA + E A P+ E P
Sbjct: 475 PAPTTPKKPAPTTPKEPAPTTPKE-PAPTT-----TKKPAPTTPKEPAP--TTPK-ETAP 525
Query: 181 PTPQRLHP 188
TP++L P
Sbjct: 526 TTPKKLTP 533
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPR 75
PEE A +P+ TP+ P T P+ P P T ++P + P+
Sbjct: 568 PEEPAPTTPKAAAPNTPKEPAPTT----PKEPAPTTPKEPAPTTPK------ETAPTTPK 617
Query: 76 PSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTS----RQSPRISVAAAPVLPAAPRP 131
+ P ++ PA P+ ++P PTS + +P AP P P P
Sbjct: 618 GTAPTTLKE---PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 674
Query: 132 PTQRRCVPVAQRG 144
T + P +G
Sbjct: 675 TTPKEPAPTTPKG 687
Score = 42.4 bits (98), Expect = 4e-04
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 25/184 (13%)
Query: 16 PEEKADLSPRPRFLATPR--VPGTPTYQLPPRIPGP-PTTRQPPRVRDHLHLSCPRASQ- 71
P+E A +P+ TP+ P TP P + P PTT + P ++ + +
Sbjct: 592 PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTST 651
Query: 72 --DRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
D+P P+ P + +P P P +P P P T + + ++ P P
Sbjct: 652 TCDKPAPTTPKGTAP--------TTPKEPAPTTPKEPAPTTPKGTAPTTLKEP--APTTP 701
Query: 130 RPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQRLHPC 189
+ P + P +G P T + +PA + ETA P+ E P TP++ P
Sbjct: 702 KKPAPKELAPTTTKG-PTSTT-----SDKPAPTTPKETAP--TTPK-EPAPTTPKKPAPT 752
Query: 190 GLQT 193
+T
Sbjct: 753 TPET 756
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 24/130 (18%)
Query: 21 DLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
DL+P + LA P T + P P+ P P T ++P AS P
Sbjct: 227 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEP-------------ASTTPKEP 273
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRR 136
+ P P + + P +P P P T+++ AP P P P T +
Sbjct: 274 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKE 326
Query: 137 CVPVAQRGLP 146
P + P
Sbjct: 327 PAPTTTKSAP 336
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 28/159 (17%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP-PRIPGPPTTRQ--PPRVRDHLHLSCPRASQD 72
P+E A +P+ TP+ T + P P P P ++ P ++ +C + +
Sbjct: 600 PKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPT 659
Query: 73 RPRPSCPLASRD-------RRRPAIPRASPD----RPRPISPAPPGP----------PTS 111
P+ + P ++ P P+ + P P +P P P PTS
Sbjct: 660 TPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 719
Query: 112 RQS----PRISVAAAPVLPAAPRPPTQRRCVPVAQRGLP 146
S P AP P P P T ++ P P
Sbjct: 720 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 758
Score = 34.7 bits (78), Expect = 0.078
Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 21/115 (18%)
Query: 17 EEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
++ A +P+ TP+ P T P+ P P T PP P S+
Sbjct: 723 DKPAPTTPKETAPTTPKEPAPTT----PKKPAPTTPETPP----------PTTSE----V 764
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
S P +++ P SPD P A P P SP+ PAA +P
Sbjct: 765 STPTTTKE---PTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKP 816
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQ 71
P++ A +P+ TP+ P T + P P+ P P TT+ P + +++
Sbjct: 446 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 505
Query: 72 DRPRPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQ-SPRISVAAAPVLP 126
P+ P +++ P P+ +P +P P +P P P T ++ +P + AP P
Sbjct: 506 TTPKEPSPTTTKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTP 564
Query: 127 AAPRPPTQRRCVPVAQRGL 145
P P T + P + L
Sbjct: 565 KEPAPTTPKETAPTTPKKL 583
Score = 48.9 bits (115), Expect = 4e-06
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 31 TPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRR 86
TP+ P T + P P+ P P TT++P + P+ P P+ P +
Sbjct: 351 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK----EPAPTTP----KKP 402
Query: 87 RPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQ 142
P P+ +P P P +P P P T +P AP P P P T + P
Sbjct: 403 APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 462
Query: 143 R 143
+
Sbjct: 463 K 463
Score = 47.4 bits (111), Expect = 1e-05
Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 19/182 (10%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQP-PRVRDHLHLSCPR----AS 70
P+E A +P+ TP+ P T P+ P P TT++P P + P+ +
Sbjct: 524 PKEPAPTTPKKPAPTTPKEPAPTT----PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 579
Query: 71 QDRPRPSCP--LASRDRRRPA------IPRASPDRPRPISPAPPGPPTSR-QSPRISVAA 121
+ P+ P LA +PA + +P+ P P +P P P T + +P
Sbjct: 580 PKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEP 639
Query: 122 APVLPAAPRPPTQRRCVPVA-QRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P G T + + AP K
Sbjct: 640 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE 699
Query: 181 PT 182
PT
Sbjct: 700 PT 701
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 14 AWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
A P KA+ + + L TP+ P TPT P+ P T ++P P +
Sbjct: 288 AKPTPKAETTTKGPALTTPKEP-TPT---TPKEPASTTPKEP----------TPTTIKSA 333
Query: 74 P-RPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAA 128
P P P + + P P+ + P P +P P P T+++ + +AP P
Sbjct: 334 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 393
Query: 129 PRPPTQRRCVPVAQR 143
P P T ++ P +
Sbjct: 394 PAPTTPKKPAPTTPK 408
Score = 44.7 bits (104), Expect = 8e-05
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQ---LPPRIPGPPTTRQPPRV-RDHLHLSCPRASQ 71
P+E +P+ TP+ P T + P+ P P TT+ P ++ + +
Sbjct: 306 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 365
Query: 72 DRPRPSCPLASRDRRRPAIPRA--SPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
P+ P +++ A +P P P +P P P T ++ AP P P
Sbjct: 366 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-------APTTPKEP 418
Query: 130 RPPTQRRCVPVAQRGLP 146
P T + P + P
Sbjct: 419 TPTTPKEPAPTTKEPAP 435
Score = 44.3 bits (103), Expect = 1e-04
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 16 PEEKADLSPRPRFLATPR---------VPGTPTYQLP--PRIPGPPTTRQPPRV--RDHL 62
P+E A +P+ TP+ P TP P P+ P P T ++P ++
Sbjct: 407 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 466
Query: 63 HLSCPRASQDRPRPSCPLASRDR-RRPAIPRASPDRPRPISPAPPGPPTSRQ-SPRISVA 120
+ S P+ P ++ P + + P +P P P T+++ +P
Sbjct: 467 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 526
Query: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P T T++PA + E A P+ E P
Sbjct: 527 PAPTTPKKPAPTTPKEPAPTTPKE-PAPTT-----TKKPAPTTPKEPAP--TTPK-ETAP 577
Query: 181 PTPQRLHP 188
TP++L P
Sbjct: 578 TTPKKLTP 585
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPR 75
PEE A +P+ TP+ P T P+ P P T ++P + P+
Sbjct: 620 PEEPAPTTPKAAAPNTPKEPAPTT----PKEPAPTTPKEPAPTTPK------ETAPTTPK 669
Query: 76 PSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTS----RQSPRISVAAAPVLPAAPRP 131
+ P ++ PA P+ ++P PTS + +P AP P P P
Sbjct: 670 GTAPTTLKE---PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 726
Query: 132 PTQRRCVPVAQRG 144
T + P +G
Sbjct: 727 TTPKEPAPTTPKG 739
Score = 42.4 bits (98), Expect = 4e-04
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 25/184 (13%)
Query: 16 PEEKADLSPRPRFLATPR--VPGTPTYQLPPRIPGP-PTTRQPPRVRDHLHLSCPRASQ- 71
P+E A +P+ TP+ P TP P + P PTT + P ++ + +
Sbjct: 644 PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTST 703
Query: 72 --DRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
D+P P+ P + +P P P +P P P T + + ++ P P
Sbjct: 704 TCDKPAPTTPKGTAP--------TTPKEPAPTTPKEPAPTTPKGTAPTTLKEP--APTTP 753
Query: 130 RPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQRLHPC 189
+ P + P +G P T + +PA + ETA P+ E P TP++ P
Sbjct: 754 KKPAPKELAPTTTKG-PTSTT-----SDKPAPTTPKETAP--TTPK-EPAPTTPKKPAPT 804
Query: 190 GLQT 193
+T
Sbjct: 805 TPET 808
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 24/130 (18%)
Query: 21 DLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
DL+P + LA P T + P P+ P P T ++P AS P
Sbjct: 279 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEP-------------ASTTPKEP 325
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRR 136
+ P P + + P +P P P T+++ AP P P P T +
Sbjct: 326 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKE 378
Query: 137 CVPVAQRGLP 146
P + P
Sbjct: 379 PAPTTTKSAP 388
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 28/159 (17%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP-PRIPGPPTTRQ--PPRVRDHLHLSCPRASQD 72
P+E A +P+ TP+ T + P P P P ++ P ++ +C + +
Sbjct: 652 PKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPT 711
Query: 73 RPRPSCPLASRD-------RRRPAIPRASPD----RPRPISPAPPGP----------PTS 111
P+ + P ++ P P+ + P P +P P P PTS
Sbjct: 712 TPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 771
Query: 112 RQS----PRISVAAAPVLPAAPRPPTQRRCVPVAQRGLP 146
S P AP P P P T ++ P P
Sbjct: 772 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 810
Score = 34.7 bits (78), Expect = 0.078
Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 21/115 (18%)
Query: 17 EEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
++ A +P+ TP+ P T P+ P P T PP P S+
Sbjct: 775 DKPAPTTPKETAPTTPKEPAPTT----PKKPAPTTPETPP----------PTTSE----V 816
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
S P +++ P SPD P A P P SP+ PAA +P
Sbjct: 817 STPTTTKE---PTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKP 868
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQ 71
P++ A +P+ TP+ P T + P P+ P P TT+ P + +++
Sbjct: 487 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 546
Query: 72 DRPRPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQ-SPRISVAAAPVLP 126
P+ P +++ P P+ +P +P P +P P P T ++ +P + AP P
Sbjct: 547 TTPKEPSPTTTKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTP 605
Query: 127 AAPRPPTQRRCVPVAQRGL 145
P P T + P + L
Sbjct: 606 KEPAPTTPKETAPTTPKKL 624
Score = 48.9 bits (115), Expect = 4e-06
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 31 TPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRR 86
TP+ P T + P P+ P P TT++P + P+ P P+ P +
Sbjct: 392 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK----EPAPTTP----KKP 443
Query: 87 RPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQ 142
P P+ +P P P +P P P T +P AP P P P T + P
Sbjct: 444 APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 503
Query: 143 R 143
+
Sbjct: 504 K 504
Score = 47.4 bits (111), Expect = 1e-05
Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 19/182 (10%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQP-PRVRDHLHLSCPR----AS 70
P+E A +P+ TP+ P T P+ P P TT++P P + P+ +
Sbjct: 565 PKEPAPTTPKKPAPTTPKEPAPTT----PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 620
Query: 71 QDRPRPSCP--LASRDRRRPA------IPRASPDRPRPISPAPPGPPTSR-QSPRISVAA 121
+ P+ P LA +PA + +P+ P P +P P P T + +P
Sbjct: 621 PKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEP 680
Query: 122 APVLPAAPRPPTQRRCVPVA-QRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P G T + + AP K
Sbjct: 681 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE 740
Query: 181 PT 182
PT
Sbjct: 741 PT 742
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 14 AWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
A P KA+ + + L TP+ P TPT P+ P T ++P P +
Sbjct: 329 AKPTPKAETTTKGPALTTPKEP-TPT---TPKEPASTTPKEP----------TPTTIKSA 374
Query: 74 P-RPSCPLASRDRRRPAIPR----ASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAA 128
P P P + + P P+ + P P +P P P T+++ + +AP P
Sbjct: 375 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 434
Query: 129 PRPPTQRRCVPVAQR 143
P P T ++ P +
Sbjct: 435 PAPTTPKKPAPTTPK 449
Score = 44.7 bits (104), Expect = 8e-05
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQ---LPPRIPGPPTTRQPPRV-RDHLHLSCPRASQ 71
P+E +P+ TP+ P T + P+ P P TT+ P ++ + +
Sbjct: 347 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 406
Query: 72 DRPRPSCPLASRDRRRPAIPRA--SPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
P+ P +++ A +P P P +P P P T ++ AP P P
Sbjct: 407 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-------APTTPKEP 459
Query: 130 RPPTQRRCVPVAQRGLP 146
P T + P + P
Sbjct: 460 TPTTPKEPAPTTKEPAP 476
Score = 44.3 bits (103), Expect = 1e-04
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 16 PEEKADLSPRPRFLATPR---------VPGTPTYQLP--PRIPGPPTTRQPPRV--RDHL 62
P+E A +P+ TP+ P TP P P+ P P T ++P ++
Sbjct: 448 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 507
Query: 63 HLSCPRASQDRPRPSCPLASRDR-RRPAIPRASPDRPRPISPAPPGPPTSRQ-SPRISVA 120
+ S P+ P ++ P + + P +P P P T+++ +P
Sbjct: 508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 567
Query: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKP 180
AP P P P T + P + P T T++PA + E A P+ E P
Sbjct: 568 PAPTTPKKPAPTTPKEPAPTTPKE-PAPTT-----TKKPAPTTPKEPAP--TTPK-ETAP 618
Query: 181 PTPQRLHP 188
TP++L P
Sbjct: 619 TTPKKLTP 626
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPR 75
PEE A +P+ TP+ P T P+ P P T ++P + P+
Sbjct: 661 PEEPAPTTPKAAAPNTPKEPAPTT----PKEPAPTTPKEPAPTTPK------ETAPTTPK 710
Query: 76 PSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTS----RQSPRISVAAAPVLPAAPRP 131
+ P ++ PA P+ ++P PTS + +P AP P P P
Sbjct: 711 GTAPTTLKE---PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 767
Query: 132 PTQRRCVPVAQRG 144
T + P +G
Sbjct: 768 TTPKEPAPTTPKG 780
Score = 42.4 bits (98), Expect = 4e-04
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 25/184 (13%)
Query: 16 PEEKADLSPRPRFLATPR--VPGTPTYQLPPRIPGP-PTTRQPPRVRDHLHLSCPRASQ- 71
P+E A +P+ TP+ P TP P + P PTT + P ++ + +
Sbjct: 685 PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTST 744
Query: 72 --DRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
D+P P+ P + +P P P +P P P T + + ++ P P
Sbjct: 745 TCDKPAPTTPKGTAP--------TTPKEPAPTTPKEPAPTTPKGTAPTTLKEP--APTTP 794
Query: 130 RPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQRLHPC 189
+ P + P +G P T + +PA + ETA P+ E P TP++ P
Sbjct: 795 KKPAPKELAPTTTKG-PTSTT-----SDKPAPTTPKETAP--TTPK-EPAPTTPKKPAPT 845
Query: 190 GLQT 193
+T
Sbjct: 846 TPET 849
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 24/130 (18%)
Query: 21 DLSPRPRFLATPRVPGTPTYQLP----PRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
DL+P + LA P T + P P+ P P T ++P AS P
Sbjct: 320 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEP-------------ASTTPKEP 366
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRR 136
+ P P + + P +P P P T+++ AP P P P T +
Sbjct: 367 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKE 419
Query: 137 CVPVAQRGLP 146
P + P
Sbjct: 420 PAPTTTKSAP 429
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 28/159 (17%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP-PRIPGPPTTRQ--PPRVRDHLHLSCPRASQD 72
P+E A +P+ TP+ T + P P P P ++ P ++ +C + +
Sbjct: 693 PKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPT 752
Query: 73 RPRPSCPLASRD-------RRRPAIPRASPD----RPRPISPAPPGP----------PTS 111
P+ + P ++ P P+ + P P +P P P PTS
Sbjct: 753 TPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 812
Query: 112 RQS----PRISVAAAPVLPAAPRPPTQRRCVPVAQRGLP 146
S P AP P P P T ++ P P
Sbjct: 813 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 851
Score = 34.7 bits (78), Expect = 0.078
Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 21/115 (18%)
Query: 17 EEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP 76
++ A +P+ TP+ P T P+ P P T PP P S+
Sbjct: 816 DKPAPTTPKETAPTTPKEPAPTT----PKKPAPTTPETPP----------PTTSE----V 857
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
S P +++ P SPD P A P P SP+ PAA +P
Sbjct: 858 STPTTTKE---PTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKP 909
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 53.1 bits (126), Expect = 2e-07
Identities = 45/151 (29%), Positives = 56/151 (37%), Gaps = 30/151 (19%)
Query: 2 DRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDH 61
D +HP G A+ A L P P++P P +PP P PP PPR
Sbjct: 210 DLAHPLDMFLGGAYYAAPA-LDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPR---- 264
Query: 62 LHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRP-------------------RPIS 102
P + P P SR P PR +P P P++
Sbjct: 265 -----PPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMA 319
Query: 103 PAPPGPPTSRQSPRISVAAAPV-LPAAPRPP 132
P PPGPP +R P +A P P AP PP
Sbjct: 320 PVPPGPPMARVPPGPPMARVPPGPPMAPLPP 350
Score = 41.2 bits (95), Expect = 8e-04
Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 10/119 (8%)
Query: 22 LSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLA 81
+ PRP + P P P +PP P PP +R P P P P P
Sbjct: 252 MPPRPPMVPMP--PRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPM 309
Query: 82 SRDRRRPAIPRASPDRPR-------PISPAPPGPPTSRQSPRISVAAAPV-LPAAPRPP 132
+ P + P P P++ PPGPP + P +A P P AP PP
Sbjct: 310 APVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 368
Score = 39.7 bits (91), Expect = 0.002
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 20/112 (17%)
Query: 15 WPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRP 74
WP ++P P + VP P + P PGPP R PP P A
Sbjct: 297 WPP----MAPVPPWPPMAPVPTGPP--MAPVPPGPPMARVPP--------GPPMARVPPG 342
Query: 75 RPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLP 126
P PL P P A P++P PPGPP + PR V + P
Sbjct: 343 PPMAPLP------PGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAP 388
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 52.4 bits (124), Expect = 4e-07
Identities = 41/124 (33%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPP--RIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
P+ L+ P LA P P PP +P PP + P + S P +
Sbjct: 499 PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF-PGQAPFSPSASLPMSPLAT 557
Query: 74 PRPSCP--LASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
P P P LA+ + P P ASP P P PGP TS PR+++A AP P P
Sbjct: 558 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP----GPPP 613
Query: 132 PTQR 135
P R
Sbjct: 614 PPSR 617
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/125 (34%), Positives = 48/125 (38%), Gaps = 18/125 (14%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCP--L 80
SP LATP P LPP + PP+ PP S P + P P P L
Sbjct: 383 SPPLSPLATPPPQAPPALALPP-LQAPPS---PPA-------SPPLSPLATPSPQAPNAL 431
Query: 81 ASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA----AAPVLPAAPRPPTQRR 136
A + P P SP P SP P PP S + S A AAP L P PP
Sbjct: 432 AVHLLQAPFSPPPSPPVQAPFSP-PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP 490
Query: 137 CVPVA 141
P A
Sbjct: 491 MSPSA 495
Score = 35.4 bits (80), Expect = 0.046
Identities = 48/189 (25%), Positives = 64/189 (33%), Gaps = 26/189 (13%)
Query: 6 PRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPG-PPTTRQPPRVRDHLHL 64
P RS ++ + P TPR P P+ P + P PPR +D
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR-KDAAPA 295
Query: 65 SCPRASQDRPRPSCPLASRDRRRPAIPRASPD---------RPRPISP----AP------ 105
P +S PS A + + P +P A+P P P++P AP
Sbjct: 296 LGPLSSSPLATPSPSAALQSQAPPTLP-ATPHSSSLTCQLATPLPLAPPSPSAPPSLQTL 354
Query: 106 PGPPTSRQSPRISVAAAPVLPAA----PRPPTQRRCVPVAQRGLPLCGTGLGLETRRPAR 161
P PP + S + +P L A P PP P Q L L PA
Sbjct: 355 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPAS 414
Query: 162 SCLGETAAP 170
L A P
Sbjct: 415 PPLSPLATP 423
Score = 33.9 bits (76), Expect = 0.13
Identities = 49/174 (28%), Positives = 61/174 (35%), Gaps = 30/174 (17%)
Query: 43 PPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPIS 102
P R G TTR P + L +S A + R A + A R P P +
Sbjct: 117 PGRASG--TTRPGPLGQKGLRIS---AEETVARGKATEAPKRSALSAGARRDTSGPTPGT 171
Query: 103 PAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQ--RRCVPVAQ-----------RGLPLCG 149
P+P SR + P A PRPPT+ R+ V A R P G
Sbjct: 172 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 231
Query: 150 TGLGLETRRPARSCLGETAAPFRFPR--------CECKPPTPQRLHPCGLQTHR 195
GL +RPA L +A P P P P + P GLQ R
Sbjct: 232 GGL----QRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 281
Score = 32.3 bits (72), Expect = 0.39
Identities = 48/206 (23%), Positives = 64/206 (31%), Gaps = 64/206 (31%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP--PRIPGPPTTRQPPRVRDHL----------- 62
P + + P P P +PT Q P P PGP T+ PR+ L
Sbjct: 559 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRS 618
Query: 63 ------------HLSCPRASQDR---------------PRPSCPLA-------SRDRRRP 88
H S ++ + P P LA SR P
Sbjct: 619 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPP 678
Query: 89 AIPRASPDRPRPISPAPPGPPTS--------RQSPRISVAAAPVLPAAPRPPTQRRCVPV 140
R +P P P PA GP ++ + P + A L P P T
Sbjct: 679 LAFRGAPGAPLPWPPAT-GPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSG----- 732
Query: 141 AQRGLPLCGTGLGLETRRPARSCLGE 166
G G G G +R P ++ LGE
Sbjct: 733 ---GKAAAGAGAGASSRSPKQARLGE 755
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 52.4 bits (124), Expect = 4e-07
Identities = 41/124 (33%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPP--RIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
P+ L+ P LA P P PP +P PP + P + S P +
Sbjct: 460 PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF-PGQAPFSPSASLPMSPLAT 518
Query: 74 PRPSCP--LASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
P P P LA+ + P P ASP P P PGP TS PR+++A AP P P
Sbjct: 519 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP----GPPP 574
Query: 132 PTQR 135
P R
Sbjct: 575 PPSR 578
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/125 (34%), Positives = 48/125 (38%), Gaps = 18/125 (14%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCP--L 80
SP LATP P LPP + PP+ PP S P + P P P L
Sbjct: 344 SPPLSPLATPPPQAPPALALPP-LQAPPS---PPA-------SPPLSPLATPSPQAPNAL 392
Query: 81 ASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA----AAPVLPAAPRPPTQRR 136
A + P P SP P SP P PP S + S A AAP L P PP
Sbjct: 393 AVHLLQAPFSPPPSPPVQAPFSP-PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP 451
Query: 137 CVPVA 141
P A
Sbjct: 452 MSPSA 456
Score = 37.0 bits (84), Expect = 0.016
Identities = 43/169 (25%), Positives = 57/169 (33%), Gaps = 16/169 (9%)
Query: 6 PRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLS 65
P RS ++ + P TPR P P+ P + +PP+V +
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL----QALRPPQVTPPRKDA 283
Query: 66 CPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVL 125
P P S PLA+ P P A P P+PP P S+ + + +P L
Sbjct: 284 APALG---PLSSSPLATPSPSAPPSPSAPPS--LQTLPSPPATPPSQATTSL---GSPTL 335
Query: 126 PAA----PRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAP 170
A P PP P Q L L PA L A P
Sbjct: 336 QATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATP 384
Score = 35.0 bits (79), Expect = 0.060
Identities = 59/217 (27%), Positives = 74/217 (34%), Gaps = 44/217 (20%)
Query: 12 GAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRI----PGPP--------TTRQPPRVR 59
GA PE +PR T R P + + P PGP TTR P +
Sbjct: 67 GATIPES----APRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ 122
Query: 60 DHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISV 119
L +S A + R A + A R P P +P+P SR +
Sbjct: 123 KGLRIS---AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 179
Query: 120 AAAPVLPAAPRPPTQ--RRCVPVAQ-----------RGLPLCGTGLGLETRRPARSCLGE 166
P A PRPPT+ R+ V A R P G GL +RPA L
Sbjct: 180 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGL----QRPASRSLSS 235
Query: 167 TAAPFRFPR--------CECKPPTPQRLHPCGLQTHR 195
+A P P P P + P GLQ R
Sbjct: 236 SATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 272
Score = 34.7 bits (78), Expect = 0.078
Identities = 38/127 (29%), Positives = 46/127 (36%), Gaps = 18/127 (14%)
Query: 29 LATPRVPGTPTYQLPPRI---PGPPTTRQPPRVRDHLHLSCPRASQDRP-RPSCPLASRD 84
LATP P+ PP + P PP T P + L P PS PL+
Sbjct: 295 LATPSPSAPPSPSAPPSLQTLPSPPAT---PPSQATTSLGSPTLQATHSFLPSPPLSPLA 351
Query: 85 RRRPAIPRASPDRPRPISPAPPGPP-------TSRQSPR---ISVAAAPVLPAAPRPPTQ 134
P P A P P+PP P S Q+P + + AP P P PP Q
Sbjct: 352 TPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP-PPSPPVQ 410
Query: 135 RRCVPVA 141
P A
Sbjct: 411 APFSPPA 417
Score = 32.3 bits (72), Expect = 0.39
Identities = 48/206 (23%), Positives = 64/206 (31%), Gaps = 64/206 (31%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP--PRIPGPPTTRQPPRVRDHL----------- 62
P + + P P P +PT Q P P PGP T+ PR+ L
Sbjct: 520 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRS 579
Query: 63 ------------HLSCPRASQDR---------------PRPSCPLA-------SRDRRRP 88
H S ++ + P P LA SR P
Sbjct: 580 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPP 639
Query: 89 AIPRASPDRPRPISPAPPGPPTS--------RQSPRISVAAAPVLPAAPRPPTQRRCVPV 140
R +P P P PA GP ++ + P + A L P P T
Sbjct: 640 LAFRGAPGAPLPWPPAT-GPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSG----- 693
Query: 141 AQRGLPLCGTGLGLETRRPARSCLGE 166
G G G G +R P ++ LGE
Sbjct: 694 ---GKAAAGAGAGASSRSPKQARLGE 716
Score = 32.0 bits (71), Expect = 0.50
Identities = 44/170 (25%), Positives = 59/170 (34%), Gaps = 18/170 (10%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLS-CPRASQDRPRPSC--- 78
+P P R GT PR P P +PP +S S P P+
Sbjct: 162 TPSPAMARRSRAAGTEVGL--PR-PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRR 218
Query: 79 PLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQR--- 135
P A +RPA S SPA GP ++R +PR AP P+ P+P +
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGP-SARGTPR-----APAHPSQPKPKGLQALR 272
Query: 136 --RCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTP 183
+ P + P G P+ S +AP P TP
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATP 322
Score = 28.1 bits (61), Expect = 7.3
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Query: 86 RRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGL 145
R PA PRP P PP + + R+ AA A R P R + +
Sbjct: 15 RTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAG----AVGRKPLAERAGGIGGATI 70
Query: 146 PLCGTGLG-LETRRPARSCLGETAAP 170
P G T RP S GE A P
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPP 96
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 51.6 bits (122), Expect = 6e-07
Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 12/131 (9%)
Query: 15 WPEEKADLSPRPRFLATPRVPGTPTYQLPPRI-PGPPTTRQ---PPRVRDHLHLSCPRAS 70
WP +K +P P TP P T T LPP P PPTT PP ++
Sbjct: 1390 WPMDKCITTPSPP-TTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP 1448
Query: 71 QDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPR 130
PS P+++ P + P P PPT+ SP + P P
Sbjct: 1449 PPTTTPSPPISTTTTPPPTTTPSPPT-------TTPSPPTTTPSPPTTTTTTPPPTTTPS 1501
Query: 131 PPTQRRCVPVA 141
PPT P A
Sbjct: 1502 PPTTTPITPPA 1512
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 16/116 (13%)
Query: 31 TPRVPGTPTYQLPPRI-PGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPA 89
TP P T T PP P PPTT ++ P ++ P + P
Sbjct: 1522 TPSPPTTTTTTPPPTTTPSPPTTTP---------ITPPTSTTTLPPTTTPSPPPTTTTTP 1572
Query: 90 IPRASPDRPRPISPAPP------GPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVP 139
P +P P +P+PP PPT+ SP + P P PPT P
Sbjct: 1573 PPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1628
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/157 (24%), Positives = 50/157 (31%), Gaps = 16/157 (10%)
Query: 31 TPRVPGTPTYQLPPRI-PGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPA 89
TP P T LPP P PPTT + P + P + P+
Sbjct: 1506 TPITPPASTTTLPPTTTPSPPTTTTT---------TPPPTTTPSPPTTTPITPPTSTTTL 1556
Query: 90 IPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCG 149
P +P P + PP P T+ P + + P + PPT P P
Sbjct: 1557 PPTTTPSPPPTTTTTPP-PTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPT 1615
Query: 150 TGLGLETRRP-----ARSCLGETAAPFRFPRCECKPP 181
T T P + + L T P P PP
Sbjct: 1616 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP 1652
Score = 38.1 bits (87), Expect = 0.007
Identities = 34/135 (25%), Positives = 46/135 (34%), Gaps = 11/135 (8%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRI----PGPPTTRQPPRVRDHLHLSCPRASQ 71
P +P P TP P T T PP I P P TT PP + P +
Sbjct: 1564 PPPTTTTTPPPT--TTPSPP-TTTTPSPPTITTTTPPPTTTPSPPTTTT---TTPPPTTT 1617
Query: 72 DRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
P + P+ P +P P P + P P T+ P + + P+ P
Sbjct: 1618 PSPPTTTPITPPTSTTTLPPTTTPS-PPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP 1676
Query: 132 PTQRRCVPVAQRGLP 146
PT P+ P
Sbjct: 1677 PTTTPSSPITTTPSP 1691
Score = 37.7 bits (86), Expect = 0.009
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 12/113 (10%)
Query: 30 ATPRVPGTPTYQLPP---RIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPS---CPLASR 83
+T +P T T PP P P TT PP S P + P P+ P +
Sbjct: 1552 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP---SPPTITTTTPPPTTTPSPPTTT 1608
Query: 84 DRRRPAIPRASPDRPRPISPAPPG---PPTSRQSPRISVAAAPVLPAAPRPPT 133
P SP PI+P PPT+ SP + P P PPT
Sbjct: 1609 TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1661
Score = 37.0 bits (84), Expect = 0.016
Identities = 41/157 (26%), Positives = 54/157 (34%), Gaps = 9/157 (5%)
Query: 30 ATPRVPGTPTYQLPP---RIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRR 86
+T +P T T PP P P TT PP S P + P P+ +S
Sbjct: 1631 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP---SPPITTTTTPPPTTTPSSPITT 1687
Query: 87 RPAIPRASPDRPRP-ISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGL 145
P+ P + P P +P+ P T+ S + + P P P T L
Sbjct: 1688 TPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTL 1747
Query: 146 PLCGTGLGLETRRPARSCLGETAAPF--RFPRCECKP 180
P T L T S T +PF P C P
Sbjct: 1748 PPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTPCVP 1784
Score = 36.6 bits (83), Expect = 0.020
Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 7/119 (5%)
Query: 31 TPRVPGTPTYQLPPRI-PGPPTTRQ--PPRVRDHLHLSCPRASQDRPRPSCPLASRDRRR 87
TP P T T PP P PPTT PP L P + P P+
Sbjct: 1601 TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTL----PPTTTPSPPPTTTTTPPPTTT 1656
Query: 88 PAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLP 146
P+ P + P + P P T+ SP + + P PT P+ P
Sbjct: 1657 PSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTP 1715
Score = 34.3 bits (77), Expect = 0.10
Identities = 31/123 (25%), Positives = 37/123 (30%), Gaps = 6/123 (4%)
Query: 31 TPRVPGTPTYQLPPRI---PGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRR 87
TP P T T LPP P P TT PP S P + P
Sbjct: 1545 TPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP---SPPTTTTPSPPTITTTTPPPTTT 1601
Query: 88 PAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPL 147
P+ P + P P + P T P + P +P P T P P
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1661
Query: 148 CGT 150
T
Sbjct: 1662 TTT 1664
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 51.2 bits (121), Expect = 8e-07
Identities = 39/119 (32%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPR 75
P SP PR + P P +P R+ G P T P + P +
Sbjct: 1071 PAALPSASPPPREVPVP-TPAPVEVPVPERVAGSPVTPLPEQEASPAR---PAGPTEESP 1126
Query: 76 PSCPLASRDRRRPAIPRASPDRP--RPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPP 132
PS PL R PA P A RP RP SP P PP ++ +S +A V+PA PP
Sbjct: 1127 PSAPL--RPPEPPAGPPAPAPRPDERPSSPIPLLPPPKKRRKTVSFSAIEVVPAPEPPP 1183
Score = 38.5 bits (88), Expect = 0.005
Identities = 43/146 (29%), Positives = 54/146 (36%), Gaps = 23/146 (15%)
Query: 4 SHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTT--RQPPRVRDH 61
S + RS A +P + R + P P T + PP P T R PP +
Sbjct: 355 SSSQFRSSDANYPAYYESWNRYQRHTSYP--PRRATREEPPGAPFAENTAERFPPSYTSY 412
Query: 62 LHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTS-----RQSPR 116
L P PS P +D R PA P+ P P G P+ R SPR
Sbjct: 413 LP----------PEPSRP-TDQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREEVRTSPR 461
Query: 117 ISVAAAPVLPAAPRPPTQRRCVPVAQ 142
A+P +P P T VP AQ
Sbjct: 462 ---PASPARSGSPAPETTNESVPFAQ 484
Score = 32.7 bits (73), Expect = 0.30
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Query: 22 LSPRPRFLATPRVPGTPTYQLPP----RIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPS 77
++P P A+P P PT + PP R P PP P R +RP
Sbjct: 1105 VTPLPEQEASPARPAGPTEESPPSAPLRPPEPPAGPPAPAPRP----------DERPSSP 1154
Query: 78 CPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAP 123
PL ++R S P PP P + P + AP
Sbjct: 1155 IPLLPPPKKRRKTVSFSAIEVVPAPEPPPATPPQAKFPGPASRKAP 1200
Score = 31.6 bits (70), Expect = 0.66
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 24 PRPRFLATPRV---PGTPTYQLPPRIPGPPTTRQPP 56
P P +LA+ + P P Y LPPR GPP PP
Sbjct: 613 PPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPP 648
Score = 27.7 bits (60), Expect = 9.5
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Query: 49 PPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASP-DRPRPISPAPPG 107
P TR+ P+ S P +S D ++ DR P +P +P P P PP
Sbjct: 559 PGATRESPKANGQNQAS-PCSSGD----DMEISDDDRGGSPPPAPTPPQQPPPPPPPPPP 613
Query: 108 PPTSRQS------PRISVAAAPVLPAAPRPP 132
PP S P P P P PP
Sbjct: 614 PPPYLASLPLGYPPHQPAYLLPPRPDGPPPP 644
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 51.2 bits (121), Expect = 8e-07
Identities = 50/189 (26%), Positives = 72/189 (38%), Gaps = 16/189 (8%)
Query: 12 GAAWPEEKADLSPR-----PRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSC 66
GA P LSP+ P+ TP V P P P P +Q P + + S
Sbjct: 863 GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP---FPKEGPATPAPKQAPAL--SMTSSS 917
Query: 67 PRASQDRPRP-SCPLASRDRRRPAIPRASPDRPR--PISPAPPGPPTSRQSPRISVAAAP 123
P+ ++ P P P + + P P A+P P+ P +P+P PT + S P
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGP 977
Query: 124 VLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFR--FPRCECKPP 181
P+ PT P + +G P + G T PA + +P FP+ PP
Sbjct: 978 ATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT-PPAVTPPSPKGSPAATPFPKGASTPP 1036
Query: 182 TPQRLHPCG 190
P G
Sbjct: 1037 AATPPSPKG 1045
Score = 45.8 bits (107), Expect = 3e-05
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 20 ADLSPR----PRFLATPRVPGTPTYQLPPRIPGPPTTRQ---PPRVRDHLHLSCPRASQD 72
A L+P+ P + P TP P P P++++ PP V + P + ++
Sbjct: 1540 ATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAP-SPKE 1598
Query: 73 RPRPSCPLASRDRRRPAIPRASPDRPR--PISPAPPGPPTSRQSPRISVAAAPVLPAAPR 130
P + + P P +P P P +PAP G PT SP ++ ++ P +P
Sbjct: 1599 LLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPT---SPPVTPSSLKDSPTSPA 1655
Query: 131 PPTQR--RCVPVAQRGLP 146
T + VP A +GLP
Sbjct: 1656 SVTCKMGATVPQASKGLP 1673
Score = 45.4 bits (106), Expect = 4e-05
Identities = 40/161 (24%), Positives = 54/161 (33%), Gaps = 20/161 (12%)
Query: 30 ATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPA 89
ATP G P P P PP P P+ P P + P
Sbjct: 923 ATPAPKGIPASPSPKGAPTPPAATPPS----------PKGGPATPSP--------KWAPT 964
Query: 90 IPRASPDRPR--PISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPL 147
P A+P P+ P +P+P G PT + S P P+ PT P + +G P
Sbjct: 965 PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 148 CGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQRLHP 188
+ PA + +P P + P TP P
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP 1065
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 7/136 (5%)
Query: 12 GAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQ 71
G A P K +P P P G P P P PP P P+ +
Sbjct: 976 GPATPSPKG--APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS 1033
Query: 72 DRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
P + P +P+ +P P P+P G P + S+ AP PAA P
Sbjct: 1034 TPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATP-----SLKGAPTPPAATPP 1088
Query: 132 PTQRRCVPVAQRGLPL 147
+ + +G P+
Sbjct: 1089 SPKGGPATPSPKGAPM 1104
Score = 41.6 bits (96), Expect = 6e-04
Identities = 37/136 (27%), Positives = 49/136 (36%), Gaps = 5/136 (3%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPS-CPLA 81
SP P P T P + PP P V ++L P+ P P P
Sbjct: 855 SPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSV---VNLPFPKEGPATPAPKQAPAL 911
Query: 82 SRDRRRPAIPRASP-DRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPV 140
S P RA+P + P SP+P G PT + S P P+ PT P
Sbjct: 912 SMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP 971
Query: 141 AQRGLPLCGTGLGLET 156
+ +G P + G T
Sbjct: 972 SPKGGPATPSPKGAPT 987
Score = 39.7 bits (91), Expect = 0.002
Identities = 49/182 (26%), Positives = 67/182 (36%), Gaps = 24/182 (13%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQP-PRVRDHLHLSCPRA--------SQDR 73
+P P P G+P P P PP P P+ L + P + S++
Sbjct: 1309 APTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG 1368
Query: 74 PRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLP----AAP 129
P P S + PA+ SP R P P+P G PTS +S AP P A
Sbjct: 1369 PTPPAATPSH-KGGPAMTPPSPKRG-PAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA 1426
Query: 130 RPP----TQRRCVPVAQRGLPLCGTGLGLETRRPAR-SCLGETAAPFRFPRCECKPPTPQ 184
P T PV+ + P G PA S G+ P P +PP P+
Sbjct: 1427 TPSKGDLTPPAVTPVSLKKAPATSAPKG----GPATPSSKGDPTLPAVTPPSPKEPPAPK 1482
Query: 185 RL 186
++
Sbjct: 1483 QV 1484
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/154 (26%), Positives = 51/154 (33%), Gaps = 34/154 (22%)
Query: 13 AAWPEEKADLSPRP----RFLATPRVPGTPTYQL-----PPRIPGPPTTRQ--------- 54
AA P K + P R A P G PT P + P P TR+
Sbjct: 1373 AATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432
Query: 55 --PPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRP-------------- 98
PP V P S + P+ P + D PA+ SP P
Sbjct: 1433 LTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKK 1492
Query: 99 RPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPP 132
P +PAP G PT S P P++ R P
Sbjct: 1493 APATPAPMGAPTLPAVIPSSPKEVPATPSSRRDP 1526
Score = 38.1 bits (87), Expect = 0.007
Identities = 41/163 (25%), Positives = 54/163 (33%), Gaps = 22/163 (13%)
Query: 16 PEEKADLSPRPRF-LATPRVPGTPTYQLP-----------PRIPGPPTT--RQPPRVRDH 61
P A P P+ LATP G PT P G PTT PP +
Sbjct: 1149 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1208
Query: 62 LHLSCPRASQDRPRPSCP------LASRDRRRPAIPRASPDRPR--PISPAPPGPPTSRQ 113
L P+ + P + P + P P A+P P+ P +P P G PT
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPA 1268
Query: 114 SPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLET 156
+ S+ P P P + +G P G T
Sbjct: 1269 ATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPT 1311
Score = 37.4 bits (85), Expect = 0.012
Identities = 41/158 (25%), Positives = 57/158 (36%), Gaps = 26/158 (16%)
Query: 12 GAAWPEEKADLSPRPRFLATPRVPGTPTYQL-------------PPRIPGPPTT--RQPP 56
GA P SP+ LATP G PT PP+ G PTT PP
Sbjct: 1101 GAPMPPAATPPSPKGG-LATPPHKGAPTTPAATPPSPKGGLATPPPK--GAPTTPAATPP 1157
Query: 57 RVRDHLHLSCPRASQDRPRPSCP------LASRDRRRPAIPRASPDRPRP--ISPAPPGP 108
+ L P+ + P + P + P P A+P P+ +P+P G
Sbjct: 1158 SPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGA 1217
Query: 109 PTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLP 146
PT+ + S P+ PT P + +G P
Sbjct: 1218 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGP 1255
Score = 36.2 bits (82), Expect = 0.027
Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 18/128 (14%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLAS 82
SP P+ TP P+ + P P P PP P + P+ P A+
Sbjct: 933 SPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAAT 992
Query: 83 -----------RDRRRPAIPRASPDRPR---PISPAPPG----PPTSRQSPRISVAAAPV 124
+ P P +P P+ +P P G P + SP+ S AA P+
Sbjct: 993 PPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPL 1052
Query: 125 LPAAPRPP 132
AP P
Sbjct: 1053 PKGAPTTP 1060
Score = 36.2 bits (82), Expect = 0.027
Identities = 44/165 (26%), Positives = 60/165 (36%), Gaps = 30/165 (18%)
Query: 12 GAAWPEEKADLSPRPRFLATPRV---PGTPTYQLP--------PRIPGPPT--TRQPPRV 58
GA+ P SP+ ATP P TP LP P + G PT PP
Sbjct: 1031 GASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSP 1090
Query: 59 RDHLHLSCPRA-----SQDRPRPSCPLASRDRR-RPAIPRASPDRPR------PISPAPP 106
+ P+ + P P LA+ + P P A+P P+ P AP
Sbjct: 1091 KGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPT 1150
Query: 107 GPPTSRQSPRISVA-----AAPVLPAAPRPPTQRRCVPVAQRGLP 146
P + SP+ +A AP PAA P + + +G P
Sbjct: 1151 TPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195
Score = 34.7 bits (78), Expect = 0.078
Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 17/144 (11%)
Query: 16 PEEKADLSPRPRF-LATPRVPGTPTYQL-------------PPRIPGPPTTRQPPRVRDH 61
P A P P+ LATP G PT PP+ P PP ++
Sbjct: 1218 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGG 1277
Query: 62 LHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAA 121
L + P P P + + + P+ +P P P+P G P P+ +
Sbjct: 1278 L-ATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSP-GTPPPKGAPTP 1335
Query: 122 APVLPAAPR-PPTQRRCVPVAQRG 144
V P +P+ PT P ++ G
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGG 1359
Score = 27.7 bits (60), Expect = 9.5
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 14/109 (12%)
Query: 67 PRASQDRPRPSC-----PLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAA 121
P Q+ P+P P++S A+ + P P P SPAP P S + +
Sbjct: 10 PATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPS 69
Query: 122 APVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAP 170
+ + P VP Q GT L L T A + L P
Sbjct: 70 PSTIASTPLE------VPFPQSS---SGTALPLGTAPEAPTFLPNLIGP 109
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 50.1 bits (118), Expect = 2e-06
Identities = 42/124 (33%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPP--RIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
P A L P LA P P PP +P PP + P + S P +
Sbjct: 770 PSPPASLPMSP--LAKPPPQAPPALATPPLQALPSPPASF-PGQAPFSPSASLPMSPLAT 826
Query: 74 PRPSCP--LASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
P P P LA+ + P P ASP P P PGP TS PR+++A AP P P
Sbjct: 827 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP----GPPP 882
Query: 132 PTQR 135
P R
Sbjct: 883 PPSR 886
Score = 45.1 bits (105), Expect = 6e-05
Identities = 50/169 (29%), Positives = 62/169 (36%), Gaps = 21/169 (12%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCP--L 80
SP LATP P LPP + PP+ PP S P + P P P L
Sbjct: 608 SPPLSPLATPPPQAPPXLALPP-LQAPPS---PPA-------SPPLSPLATPSPQAPNAL 656
Query: 81 ASRDRRRPAIPRASPDRPRPISP------APPGPPTSRQSPRISVAAAPVLPAAP-RPPT 133
A + P P SP P SP +P P S+ P ++ V P+ P PP
Sbjct: 657 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 716
Query: 134 QRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAA-PFRFPRCECKPP 181
P Q PL L + PA + +A P R P PP
Sbjct: 717 SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPP 765
Score = 41.6 bits (96), Expect = 6e-04
Identities = 41/129 (31%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPR 75
P +A SP +P TP Q PP + PP P S P + P
Sbjct: 671 PPVQAPFSPPASPPVSPSA--TPPSQAPPSLAAPPLQVPPSPPA-----SPPMSPSATPP 723
Query: 76 PSCP--LASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPT 133
P P LA+ + P P ASP P+SP+ PP R P + AAP L P PP
Sbjct: 724 PQAPPPLAAPPLQVPPSPPASP----PMSPSATPPP--RVPPLL---AAPPLQVPPSPPA 774
Query: 134 QRRCVPVAQ 142
P+A+
Sbjct: 775 SLPMSPLAK 783
Score = 37.7 bits (86), Expect = 0.009
Identities = 35/124 (28%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 16 PEEKADLSPRPRFLATPRVP---GTPTYQLPPRIPGPP----TTRQPPRVRDHLHLSCPR 68
P A P P+ P P Q+PP P P + PPRV L + P
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLL-AAPPL 766
Query: 69 ASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAA 128
P S P++ + P P A P P+PP Q+P A+ P+ P A
Sbjct: 767 QVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPA-SFPGQAPFSPSASLPMSPLA 825
Query: 129 PRPP 132
PP
Sbjct: 826 TPPP 829
Score = 37.4 bits (85), Expect = 0.012
Identities = 37/130 (28%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Query: 6 PRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPG-PPTTRQPPRVRDHLHL 64
P RS ++ + P TPR P P+ P + P PPR +D
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR-KDAAPA 295
Query: 65 SCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRI--SVAAA 122
P +S PS S + RP P + P P + PP PP + P S +A
Sbjct: 296 LGPLSSSPLATPS---PSGTKARPVPPPDNAATPLP-ATLPPSPPLATPLPLAPPSPSAP 351
Query: 123 PVLPAAPRPP 132
P L P PP
Sbjct: 352 PSLQTLPSPP 361
Score = 37.4 bits (85), Expect = 0.012
Identities = 46/166 (27%), Positives = 62/166 (37%), Gaps = 23/166 (13%)
Query: 29 LATPRVPGTPTYQLPP----RIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRD 84
LATP GT +PP P P T P + L L+ P PS P +
Sbjct: 304 LATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLA-------PPSPSAPPSL-- 354
Query: 85 RRRPAIPRASPDRPRPISPAPP--GPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQ 142
+ P+ P P + P PP PP+ + P I V + P+ PP+ P+A
Sbjct: 355 QTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPS-----PLAL 409
Query: 143 RGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQRLHP 188
L T LG T + S L T +P + P P P
Sbjct: 410 SSLQ-ATTSLGSPTLQATHSFL--TMSPRQTQASLTSPSRPASTPP 452
Score = 37.0 bits (84), Expect = 0.016
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 9/133 (6%)
Query: 43 PPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDR--PRP 100
PP + PP + P + + L+ P S PL + P P P + P P
Sbjct: 520 PPSLQTPPASLTTPPLENLPSLAPPPLQT----ASAPLTTPHLETPPCPAPCPLQAPPSP 575
Query: 101 ISPAPPGPPTSRQSPRISVA---AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETR 157
++ PP P+S +P A+P L P PP P Q L L
Sbjct: 576 LTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPS 635
Query: 158 RPARSCLGETAAP 170
PA L A P
Sbjct: 636 PPASPPLSPLATP 648
Score = 37.0 bits (84), Expect = 0.016
Identities = 33/114 (28%), Positives = 39/114 (34%), Gaps = 17/114 (14%)
Query: 22 LSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLS-CPRASQDRPRPSCPL 80
L P L TP P LP P P T P HL CP CPL
Sbjct: 523 LQTPPASLTTP-----PLENLPSLAPPPLQTASAPLTTPHLETPPCPAP--------CPL 569
Query: 81 ASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQ 134
+ P P+ P I+ PP P + SP + +P L PP Q
Sbjct: 570 QAPPSPLTTPP---PETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQ 620
Score = 36.6 bits (83), Expect = 0.020
Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Query: 29 LATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRP 88
LA P + P P + P+ PP L+ P CPL + P
Sbjct: 518 LAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPL-----QAP 572
Query: 89 AIPRASPDRPRPIS---PAPPGPPTSRQSPRISVAAAPVLPAAPRPP 132
P +P P S P P PP P + + P+ P A PP
Sbjct: 573 PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPP 619
Score = 35.8 bits (81), Expect = 0.035
Identities = 37/123 (30%), Positives = 43/123 (34%), Gaps = 14/123 (11%)
Query: 23 SPRPRFLATP--RVPGTPTYQLPPRIPG--PPTTRQPPRVRDHLHLSCPRASQDRPRPSC 78
S P LA P +VP +P PP P PP PP L+ P P+
Sbjct: 693 SQAPPSLAAPPLQVPPSPPAS-PPMSPSATPPPQAPPP-------LAAPPLQVPPSPPAS 744
Query: 79 PLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCV 138
P S P PR P P PP PP S ++ PA PP Q
Sbjct: 745 PPMSPSATPP--PRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPS 802
Query: 139 PVA 141
P A
Sbjct: 803 PPA 805
Score = 33.9 bits (76), Expect = 0.13
Identities = 49/174 (28%), Positives = 61/174 (35%), Gaps = 30/174 (17%)
Query: 43 PPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPIS 102
P R G TTR P + L +S A + R A + A R P P +
Sbjct: 117 PGRASG--TTRPGPLGQKGLRIS---AEETVARGKATEAPKRSALSAGARRDTSGPTPGT 171
Query: 103 PAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQ--RRCVPVAQ-----------RGLPLCG 149
P+P SR + P A PRPPT+ R+ V A R P G
Sbjct: 172 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 231
Query: 150 TGLGLETRRPARSCLGETAAPFRFPR--------CECKPPTPQRLHPCGLQTHR 195
GL +RPA L +A P P P P + P GLQ R
Sbjct: 232 GGL----QRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 281
Score = 33.1 bits (74), Expect = 0.23
Identities = 37/125 (29%), Positives = 43/125 (34%), Gaps = 13/125 (10%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPT------YQLPPRIPGPPTTRQP--PRVRDHLHLSCP 67
P LSP LATP P P Q P P P + P P + S
Sbjct: 636 PPASPPLSP----LATPS-PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 690
Query: 68 RASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPA 127
SQ P + P PA P SP P PP Q P A+ P+ P+
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPS 750
Query: 128 APRPP 132
A PP
Sbjct: 751 ATPPP 755
Score = 32.3 bits (72), Expect = 0.39
Identities = 48/206 (23%), Positives = 64/206 (31%), Gaps = 64/206 (31%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQLP--PRIPGPPTTRQPPRVRDHL----------- 62
P + + P P P +PT Q P P PGP T+ PR+ L
Sbjct: 828 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRS 887
Query: 63 ------------HLSCPRASQDR---------------PRPSCPLA-------SRDRRRP 88
H S ++ + P P LA SR P
Sbjct: 888 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPP 947
Query: 89 AIPRASPDRPRPISPAPPGPPTS--------RQSPRISVAAAPVLPAAPRPPTQRRCVPV 140
R +P P P PA GP ++ + P + A L P P T
Sbjct: 948 LAFRGAPGAPLPWPPAT-GPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSG----- 1001
Query: 141 AQRGLPLCGTGLGLETRRPARSCLGE 166
G G G G +R P ++ LGE
Sbjct: 1002 ---GKAAAGAGAGASSRSPKQARLGE 1024
Score = 31.6 bits (70), Expect = 0.66
Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 26/131 (19%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRA--SQDRPRPSCPL 80
S P P P TP Q PP + PP + PP ++ + P + S P PL
Sbjct: 349 SAPPSLQTLPSPPATPPSQAPPSMTTPP-MQAPPSLQTIPPIQVPHSLTSPSLQAPPSPL 407
Query: 81 ASRDRR-------------------RPAIPRASPDRP-RPISPAPPGPPTSRQSPRISVA 120
A + P +AS P RP S P PP Q+P +S+
Sbjct: 408 ALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPL--QAP-LSLP 464
Query: 121 AAPVLPAAPRP 131
A+P L + P
Sbjct: 465 ASPPLQTSLSP 475
Score = 30.4 bits (67), Expect = 1.5
Identities = 47/191 (24%), Positives = 68/191 (35%), Gaps = 12/191 (6%)
Query: 50 PTTRQPPRVRDHLHLSCPRASQD-RPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGP 108
P+ R PR H P+ Q RP P R+ A P P P++ P
Sbjct: 257 PSARGTPRAPAHPSQPKPKGLQALRPPQVTP-----PRKDAAPALGPLSSSPLATPSPSG 311
Query: 109 PTSRQSPRISVAAAPV---LPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLG 165
+R P AA P+ LP +P T P + P T P+++
Sbjct: 312 TKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPS 371
Query: 166 ETAAPFRFPRCECKPPTPQRLHPCGLQTHRGVFIPVGYRRTAASSSLWVTDAQ-THRGVF 224
T P + P P Q H + + P+ A++SL Q TH F
Sbjct: 372 MTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHS--F 429
Query: 225 IPVGYRRTAAS 235
+ + R+T AS
Sbjct: 430 LTMSPRQTQAS 440
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 48.9 bits (115), Expect = 4e-06
Identities = 65/220 (29%), Positives = 86/220 (39%), Gaps = 45/220 (20%)
Query: 3 RSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHL 62
R H RS + + + + SPR R +P P P R P+ PPR R
Sbjct: 521 RRHSPSRSASPSPRKRQKETSPRGRRRRSPSPP-------PTRRRRSPSPAPPPRRR--- 570
Query: 63 HLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAA 122
R PR P RR P+ R SP R SP+PP P+ A+
Sbjct: 571 -----RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP--------PKRRTASP 617
Query: 123 PVLP---AAPRPPTQRR---CVPVAQRGLPLCGTGLGLETRRPARSCL-GETAAPFRFPR 175
P P A+P PP +RR P QR P+ + R P+ S + ++P R R
Sbjct: 618 PPPPKRRASPSPPPKRRVSHSPPPKQRSSPV------TKRRSPSLSSKHRKGSSPSRSTR 671
Query: 176 CECKPPTPQRLH-----PCGLQTHRGVFIPVGYRRTAASS 210
E + P P + H P QT P RR A+SS
Sbjct: 672 -EARSPQPNKRHSPSPRPRAPQTSSS---PPPVRRGASSS 707
Score = 38.1 bits (87), Expect = 0.007
Identities = 43/132 (32%), Positives = 53/132 (40%), Gaps = 20/132 (15%)
Query: 3 RSHPRIRSFGAAWPEEKADLSPR---PRFLATPRVPGTPTYQLPPR-IPGPPTTRQPP-- 56
RS R RS P + R PR +PR +P + PPR +P PP R+
Sbjct: 285 RSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSP 344
Query: 57 ---RVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPR--------ASPDRPR--PISP 103
R R LS +S R P +R + PR ASP R R P P
Sbjct: 345 VRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPP 404
Query: 104 APPGPPTSRQSP 115
A P PP +R SP
Sbjct: 405 ATP-PPKTRHSP 415
Score = 35.4 bits (80), Expect = 0.046
Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Query: 4 SHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPR--IPGPPTTRQPPRVRDH 61
S P + A P+ SP PR PR P T + P R P RQ P
Sbjct: 664 SSPSRSTREARSPQPNKRHSPSPR----PRAPQTSSSPPPVRRGASSSPQRRQSPSPSTR 719
Query: 62 LHLSCPRASQDRP-RPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVA 120
R + + + + + + RR + R+ P P + PP PP+ QS S
Sbjct: 720 PIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTN 779
Query: 121 AAPVLPA--------APRPP 132
+P +P +P PP
Sbjct: 780 WSPAVPVKKAKSPTPSPSPP 799
Score = 32.7 bits (73), Expect = 0.30
Identities = 39/145 (26%), Positives = 52/145 (35%), Gaps = 14/145 (9%)
Query: 68 RASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAA-APVLP 126
R++ PR S RR P P R R SP+P PP R++P P P
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRR-SPSPAPPPRRRRTPTPPPRRRTPSPP 585
Query: 127 AAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQRL 186
R P+ RR P QR P+ TA+P P+ P P +
Sbjct: 586 PRRRSPSPRRYSPPIQR------------RYSPSPPPKRRTASPPPPPKRRASPSPPPKR 633
Query: 187 HPCGLQTHRGVFIPVGYRRTAASSS 211
+ PV RR+ + SS
Sbjct: 634 RVSHSPPPKQRSSPVTKRRSPSLSS 658
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 47.4 bits (111), Expect = 1e-05
Identities = 53/181 (29%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 32 PRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIP 91
P +P P+ + P R PGPP+ + P P + P+ PL + R P P
Sbjct: 1062 PSLPIRPS-RAPSRTPGPPSAQSSPIDAQ------PATPLPQKDPAQPLEPK-RPPPPRP 1113
Query: 92 RASPDRPRPISPAPPGPPTSRQSPRIS--VAAAPVLPAAPRPPTQRRCVPVAQRGLPLCG 149
A P RP P P P PP+ +SP + AP P R R P Q G L G
Sbjct: 1114 VAPPTRPAP--PQRPPPPSGARSPAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAG--LAG 1169
Query: 150 TG-LGLETRRPA-RSCLGETAAPFRFPRCECKPPTPQRLHPCGLQTHRGVFIPVGYRRTA 207
G G T RP G +AP R TP+ + F+P + A
Sbjct: 1170 PGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQA 1229
Query: 208 A 208
A
Sbjct: 1230 A 1230
Score = 35.0 bits (79), Expect = 0.060
Identities = 44/177 (24%), Positives = 60/177 (33%), Gaps = 12/177 (6%)
Query: 20 ADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPS-- 77
A SP ATP P L P+ P PP PP P + P P+
Sbjct: 1081 AQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRK 1140
Query: 78 ---CPLASRDRRRPAIPRASPDRPRPIS-PAPPGPPTSRQS--PRISVAAAPV----LPA 127
P + R+ I R+ P ++ P P G T+R + PR V +AP A
Sbjct: 1141 EFGAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASA 1200
Query: 128 APRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTPQ 184
P + +G L + P +S L A + P P PQ
Sbjct: 1201 GRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQ 1257
Score = 28.5 bits (62), Expect = 5.6
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 74 PRPSCPLASRDRRRPAIPRASP---DRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPR 130
P+ S P ++ + P +P A+P P+P PP PP +S + A P +
Sbjct: 1233 PQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSRSSHSLPSEASSQPQQEQ 1292
Query: 131 P 131
P
Sbjct: 1293 P 1293
Score = 27.7 bits (60), Expect = 9.5
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 102 SPAPPGPPTSRQSPRISVAAAPVLPAAP-RPPTQRRCVPVAQRGLPLCGTGLGLETRRPA 160
SP+ + QSP IS P LP P R P++ P AQ L + PA
Sbjct: 1041 SPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPA 1100
Query: 161 RSCLGETAAPFRFPRCECKPPTPQRLHP 188
+ + P R +P PQR P
Sbjct: 1101 QPLEPKRPPPPRPVAPPTRPAPPQRPPP 1128
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 46.6 bits (109), Expect = 2e-05
Identities = 66/266 (24%), Positives = 92/266 (34%), Gaps = 60/266 (22%)
Query: 13 AAWPEEKADLSPRPRFLATPRVP------GTPTYQLPPR----------IPGPPTTRQPP 56
A+ P+ A SPR L TP G PT ++ P P PPT + P
Sbjct: 55 ASGPQTSAP-SPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQPAGTCPPPPTGEKQP 113
Query: 57 RVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAI-------PRASPDRPRPISPAPPGPP 109
R R S R L + RR PA PR P R P PPG P
Sbjct: 114 RPHGF------RCSHGSKRAPALLGAPARRPPAHIPAQPRWPRLQPVAKRRARPVPPGLP 167
Query: 110 TSRQSPRISVAAAPVLPAAPRPPTQR-----RCVPVAQRGL-----------PLCGTGLG 153
+ + ++ P+ PAA P R + QRGL LC G
Sbjct: 168 GAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIEETGPARQISDLCEVSQG 227
Query: 154 LETRRPA------RSCLGETAAPFRFPRCECKPPTPQRLHPCGLQTHRGVFIPVGYRRTA 207
+ R S +T +P +P P+ P T RG ++ A
Sbjct: 228 VGAFRAGGCPSSLASSREQTHSPHLYPSPSSSSPSSWEAPPANSVTPRGRPGIPAHKLGA 287
Query: 208 ASS--------SLWVTDAQTHRGVFI 225
+S+ SLW+T+ +T + +
Sbjct: 288 SSAVCQEATYKSLWLTERETPHSLLL 313
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 46.6 bits (109), Expect = 2e-05
Identities = 66/266 (24%), Positives = 92/266 (34%), Gaps = 60/266 (22%)
Query: 13 AAWPEEKADLSPRPRFLATPRVP------GTPTYQLPPR----------IPGPPTTRQPP 56
A+ P+ A SPR L TP G PT ++ P P PPT + P
Sbjct: 55 ASGPQTSAP-SPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQPAGTCPPPPTGEKQP 113
Query: 57 RVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAI-------PRASPDRPRPISPAPPGPP 109
R R S R L + RR PA PR P R P PPG P
Sbjct: 114 RPHGF------RCSHGSKRAPALLGAPARRPPAHIPAQPRWPRLQPVAKRRARPVPPGLP 167
Query: 110 TSRQSPRISVAAAPVLPAAPRPPTQR-----RCVPVAQRGL-----------PLCGTGLG 153
+ + ++ P+ PAA P R + QRGL LC G
Sbjct: 168 GAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIEETGPARQISDLCEVSQG 227
Query: 154 LETRRPA------RSCLGETAAPFRFPRCECKPPTPQRLHPCGLQTHRGVFIPVGYRRTA 207
+ R S +T +P +P P+ P T RG ++ A
Sbjct: 228 VGAFRAGGCPSSLASSREQTHSPHLYPSPSSSSPSSWEAPPANSVTPRGRPGIPAHKLGA 287
Query: 208 ASS--------SLWVTDAQTHRGVFI 225
+S+ SLW+T+ +T + +
Sbjct: 288 SSAVCQEATYKSLWLTERETPHSLLL 313
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 46.6 bits (109), Expect = 2e-05
Identities = 66/266 (24%), Positives = 92/266 (34%), Gaps = 60/266 (22%)
Query: 13 AAWPEEKADLSPRPRFLATPRVP------GTPTYQLPPR----------IPGPPTTRQPP 56
A+ P+ A SPR L TP G PT ++ P P PPT + P
Sbjct: 55 ASGPQTSAP-SPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQPAGTCPPPPTGEKQP 113
Query: 57 RVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAI-------PRASPDRPRPISPAPPGPP 109
R R S R L + RR PA PR P R P PPG P
Sbjct: 114 RPHGF------RCSHGSKRAPALLGAPARRPPAHIPAQPRWPRLQPVAKRRARPVPPGLP 167
Query: 110 TSRQSPRISVAAAPVLPAAPRPPTQR-----RCVPVAQRGL-----------PLCGTGLG 153
+ + ++ P+ PAA P R + QRGL LC G
Sbjct: 168 GAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIEETGPARQISDLCEVSQG 227
Query: 154 LETRRPA------RSCLGETAAPFRFPRCECKPPTPQRLHPCGLQTHRGVFIPVGYRRTA 207
+ R S +T +P +P P+ P T RG ++ A
Sbjct: 228 VGAFRAGGCPSSLASSREQTHSPHLYPSPSSSSPSSWEAPPANSVTPRGRPGIPAHKLGA 287
Query: 208 ASS--------SLWVTDAQTHRGVFI 225
+S+ SLW+T+ +T + +
Sbjct: 288 SSAVCQEATYKSLWLTERETPHSLLL 313
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.2 bits (108), Expect = 3e-05
Identities = 53/186 (28%), Positives = 62/186 (33%), Gaps = 29/186 (15%)
Query: 14 AWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
A PE LS T R PP +P PP +PP D HL
Sbjct: 1159 AGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPT-DLAHL--------- 1208
Query: 74 PRPSCPLASRDRRRPAIPRASPD------------RPRPISPAPPGP-PTSRQSPRISVA 120
P P + R+PA P SP P P S P P P S + R
Sbjct: 1209 --PPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGT 1266
Query: 121 AAPVLPAAPRPPTQRRCVPVAQRGLPLCGTG---LGLETRRPARSCLGETAAPFRFPRCE 177
PV P P PPT + V A GLP G R+P + P
Sbjct: 1267 PPPVSPKPPPPPTAPKPVK-AVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASP 1325
Query: 178 CKPPTP 183
KPP+P
Sbjct: 1326 AKPPSP 1331
Score = 40.4 bits (93), Expect = 0.001
Identities = 39/129 (30%), Positives = 50/129 (38%), Gaps = 17/129 (13%)
Query: 12 GAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQ 71
G+ P K P P R GTP + P+ P PPT +P + L P S
Sbjct: 1241 GSPTPTSKKVPLPGPGSPEVKRAHGTPP-PVSPKPPPPPTAPKPVKAVAGL----PSGSA 1295
Query: 72 DRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTS--------RQSPRISVAAAP 123
PS P S R+ PA P P + +P PP+ + PR + AAA
Sbjct: 1296 G---PS-PAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAA 1351
Query: 124 VLPAAPRPP 132
A P PP
Sbjct: 1352 AAAAPPAPP 1360
Score = 35.8 bits (81), Expect = 0.035
Identities = 34/130 (26%), Positives = 45/130 (34%), Gaps = 29/130 (22%)
Query: 30 ATPRVPGTPTYQLPPRI-----PGPPTTRQP--PRVRDHLHLSCPRASQDRPRPSCPLAS 82
+ P VPG P LPP P PT +P P+ H P ++ +P P
Sbjct: 755 SVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQ---LL 811
Query: 83 RDRRRPAIPRASPDRPR-----------------PISPAPPGPPTSRQSPRISVAAAPVL 125
RP PR+ P P P +P P PP P ++ P
Sbjct: 812 PPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTAVP--TLCLPPEA 869
Query: 126 PAAPRPPTQR 135
A P P +R
Sbjct: 870 DAEPGRPKKR 879
Score = 30.8 bits (68), Expect = 1.1
Identities = 44/143 (30%), Positives = 52/143 (36%), Gaps = 24/143 (16%)
Query: 47 PGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAI----PRASPDRPRPIS 102
P P T + R H H S RAS P P R P P +P + RP S
Sbjct: 733 PAPGTPPREARPGRHGH-SIKRASV----PPVPGKPRQVLPPGTSHFTPPQTPTKTRPGS 787
Query: 103 PAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGT--GLGLETRRPA 160
P G P V P L PPT+R P++ R LP T G +P
Sbjct: 788 PQALGGPHGPAPATAKVKPTPQL----LPPTER---PMSPRSLPQSPTHRGFAYVLPQPV 840
Query: 161 RSCLGETAAPFRFPRCECKPPTP 183
+G AAP P PP P
Sbjct: 841 EGEVG-PAAPGPAP-----PPVP 857
Score = 29.6 bits (65), Expect = 2.5
Identities = 42/146 (28%), Positives = 54/146 (36%), Gaps = 22/146 (15%)
Query: 6 PRIRSFGAAWPEE-KADLSPRPRFLATPRVP-GTPTYQLPPRI---PGPPTTRQPPRVRD 60
P R F P+ + ++ P A P VP PT LPP PG P R R
Sbjct: 827 PTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNRY 886
Query: 61 HLHLSCPRASQDR-PRPSCPLASRDRR--------RPA-----IPRASPDRPRPISPAPP 106
S P + P + P A+ RR PA + R+ RP PP
Sbjct: 887 AASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPP 946
Query: 107 GPPTSRQSPRI---SVAAAPVLPAAP 129
PP R S + ++A PV A P
Sbjct: 947 PPPPKRSSSALASANLADEPVPDAEP 972
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 46.2 bits (108), Expect = 3e-05
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 18/182 (9%)
Query: 18 EKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRV-RDHLHLSCPRASQDRPRP 76
+ A +P P + P P +PP P PP PP + + + P S P P
Sbjct: 800 QAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVP 859
Query: 77 SC--PLASRDRRRPAIP--RASPDRPRPISPAPPGPPTSRQSPRISVAAAPV-LPAAPRP 131
S +AS+ P P + P +P P + AP PP + P+ ++ PV P P P
Sbjct: 860 SVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPP 919
Query: 132 PTQRRCV-------PVAQRGLPLCGTGLGLETRRPARS-CLGETAAPFRFPRCECKPPTP 183
P + V PV P T + P +S G+ + P + PPTP
Sbjct: 920 PPESSLVFPPPPPSPVPAPPPPPPPTA----SPTPDKSGSPGKKTSKTSSPGGKKPPPTP 975
Query: 184 QR 185
QR
Sbjct: 976 QR 977
Score = 38.5 bits (88), Expect = 0.005
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 9/134 (6%)
Query: 2 DRSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDH 61
+ S R+ S + LSP+P+ + TP P+ LPP P PP PP
Sbjct: 589 ESSKARMESMNRPYTSLVPPLSPQPK-IVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPP 647
Query: 62 LHLSCPRASQDRPR--PSCPLASRDRRRPAIPRASPDRPRPIS-PAPPGPPTSRQSPRIS 118
P SQ P + P+ + + AS P PP + P+I
Sbjct: 648 -----PLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQIL 702
Query: 119 VAAAPVLPAAPRPP 132
V V+P P PP
Sbjct: 703 VPPNGVVPPPPPPP 716
Score = 36.2 bits (82), Expect = 0.027
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Query: 24 PRPRFLATPRVPGTPTYQLPPRIPGPPTTRQ----PPRVRDHLHLSCPRASQDRPRPSCP 79
P P P PG+ QL P P P+ Q PP ++ H + + P P P
Sbjct: 710 PPPPPPPPPPTPGSAMAQLKPA-PCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPP 768
Query: 80 LASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRR 136
+ + +P +P +P PAP T +P ++ AA P P P PP +++
Sbjct: 769 IPA------PLPPQAPPKPLVTIPAPTS--TKTVAPVVTQAAPPT-PTPPVPPAKKQ 816
Score = 36.2 bits (82), Expect = 0.027
Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 21/114 (18%)
Query: 32 PRVPGTPTYQLPP-----------RIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPL 80
P P P + PP PPT PP + P Q P+P +
Sbjct: 732 PCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPI------PAPLPPQAPPKPLVTI 785
Query: 81 ASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQS--PRISVAAAPVLPAAPRPP 132
+ + P + + P +P PP PP +Q P + +P P P PP
Sbjct: 786 PAPTSTKTVAPVVT--QAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPP 837
Score = 35.0 bits (79), Expect = 0.060
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 38 PTYQLPPRIPGPPTTRQPPR------VRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIP 91
PT PP IP P + PP+ P +Q P P +++PA P
Sbjct: 761 PTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFP 820
Query: 92 RASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
+ P P P PPT + A P P +P P
Sbjct: 821 ASYIPPSPPTPPVPVPPPTLPKQQSF-CAKPPPSPLSPVP 859
Score = 29.6 bits (65), Expect = 2.5
Identities = 26/112 (23%), Positives = 38/112 (33%), Gaps = 10/112 (8%)
Query: 38 PTYQLPPR--IPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCP-LASRDRRRPAIPRAS 94
P +PP +P PP PP + +Q +P P P L P +
Sbjct: 699 PQILVPPNGVVPPPPPPPPPPTPGSAM-------AQLKPAPCAPSLPQFSAPPPPLKIHQ 751
Query: 95 PDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLP 146
++P P PP +P A L P P + + PV + P
Sbjct: 752 VQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAP 803
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 3e-05
Identities = 52/193 (26%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQ----LPPRIPG--------------PPTTRQPPR 57
P + P +P VPG P PP PG P ++ P
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 58 VRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRI 117
R L + RA D+P P P RP+I R + P P + PP P T R S
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGN---RPSIHREAVPPPPPQNNKPPVPSTPRPSASS 304
Query: 118 SVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARS-CLGETAAPFRFP-R 175
P P+ P PP LP +G R P R+ L + P P R
Sbjct: 305 QAPPPPPPPSRPGPPP-----------LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR 353
Query: 176 CECKPPTPQRLHP 188
PP P P
Sbjct: 354 SGPLPPPPSERPP 366
Score = 42.4 bits (98), Expect = 4e-04
Identities = 37/109 (33%), Positives = 44/109 (40%), Gaps = 31/109 (28%)
Query: 31 TPRVP--------GTPTYQLPPR---IPGPPTTRQPPRVRDHLHLSCP---------RAS 70
TPR+P TP P R +P PP+ R PP VRD S P S
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGS 390
Query: 71 QDRPRPSCPL--------ASRDRRRPAIPRASPDRPRPISPAPPGPPTS 111
R P+ P + R RP +P PDRP +P PP P TS
Sbjct: 391 TSRALPATPQLPSRSGVDSPRSGPRPPLP---PDRPSAGAPPPPPPSTS 436
Score = 36.6 bits (83), Expect = 0.020
Identities = 45/162 (27%), Positives = 54/162 (33%), Gaps = 28/162 (17%)
Query: 24 PRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASR 83
P P P VP TP + P PP PP R P +S + P P +
Sbjct: 284 PPPPQNNKPPVPSTPRPSASSQAPPPP----PPPSRPGPPPLPPSSSGNDETPRLPQRNL 339
Query: 84 DRRRPAIPRASPDRPRPISPAPPG--PPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVA 141
P SP R P+ P P PP R P S P P PP R
Sbjct: 340 SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG------PLPPPPPVSRN--GST 391
Query: 142 QRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTP 183
R LP + P+RS + PR +PP P
Sbjct: 392 SRALP-------ATPQLPSRSGVDS-------PRSGPRPPLP 419
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 3e-05
Identities = 52/193 (26%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 16 PEEKADLSPRPRFLATPRVPGTPTYQ----LPPRIPG--------------PPTTRQPPR 57
P + P +P VPG P PP PG P ++ P
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 58 VRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRI 117
R L + RA D+P P P RP+I R + P P + PP P T R S
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGN---RPSIHREAVPPPPPQNNKPPVPSTPRPSASS 304
Query: 118 SVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARS-CLGETAAPFRFP-R 175
P P+ P PP LP +G R P R+ L + P P R
Sbjct: 305 QAPPPPPPPSRPGPPP-----------LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR 353
Query: 176 CECKPPTPQRLHP 188
PP P P
Sbjct: 354 SGPLPPPPSERPP 366
Score = 42.4 bits (98), Expect = 4e-04
Identities = 37/109 (33%), Positives = 44/109 (40%), Gaps = 31/109 (28%)
Query: 31 TPRVP--------GTPTYQLPPR---IPGPPTTRQPPRVRDHLHLSCP---------RAS 70
TPR+P TP P R +P PP+ R PP VRD S P S
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGS 390
Query: 71 QDRPRPSCPL--------ASRDRRRPAIPRASPDRPRPISPAPPGPPTS 111
R P+ P + R RP +P PDRP +P PP P TS
Sbjct: 391 TSRALPATPQLPSRSGVDSPRSGPRPPLP---PDRPSAGAPPPPPPSTS 436
Score = 36.6 bits (83), Expect = 0.020
Identities = 45/162 (27%), Positives = 54/162 (33%), Gaps = 28/162 (17%)
Query: 24 PRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASR 83
P P P VP TP + P PP PP R P +S + P P +
Sbjct: 284 PPPPQNNKPPVPSTPRPSASSQAPPPP----PPPSRPGPPPLPPSSSGNDETPRLPQRNL 339
Query: 84 DRRRPAIPRASPDRPRPISPAPPG--PPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVA 141
P SP R P+ P P PP R P S P P PP R
Sbjct: 340 SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG------PLPPPPPVSRN--GST 391
Query: 142 QRGLPLCGTGLGLETRRPARSCLGETAAPFRFPRCECKPPTP 183
R LP + P+RS + PR +PP P
Sbjct: 392 SRALP-------ATPQLPSRSGVDS-------PRSGPRPPLP 419
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 45.1 bits (105), Expect = 6e-05
Identities = 39/123 (31%), Positives = 47/123 (38%), Gaps = 10/123 (8%)
Query: 12 GAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQ 71
G +P P P F A P P PP PGPP P +V L+ P
Sbjct: 214 GDRFPGPAGPGGPPPPFPAGQTPPRPPLG--PPGPPGPPGPPPPGQVLPP-PLAGPPNRG 270
Query: 72 DRPRPSCPLASRDRRRPAIPRASPDRPRPISP--APPGPPTSRQSPRISVAAAPVLPAAP 129
DRP P + +P + P P P+ PPGPP +Q P P P P
Sbjct: 271 DRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGP-----PPPPGPFPP 325
Query: 130 RPP 132
RPP
Sbjct: 326 RPP 328
Score = 37.4 bits (85), Expect = 0.012
Identities = 38/119 (31%), Positives = 43/119 (36%), Gaps = 21/119 (17%)
Query: 24 PRPRFLATPRVPGTPT-----YQLPPRIPGPPTT--RQPPRVRDHLHLSCPRASQDR--- 73
PRP L P PG P LPP + GPP R PP V L P
Sbjct: 237 PRPP-LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPV---LFPGQPFGQPPLGPL 292
Query: 74 ---PRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAP 129
P P P P + P P P P PPGP P +++A P LP P
Sbjct: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGP----LGPPLTLAPPPHLPGPP 347
Score = 33.1 bits (74), Expect = 0.23
Identities = 37/134 (27%), Positives = 43/134 (32%), Gaps = 16/134 (11%)
Query: 14 AWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIP------GPPTTRQPPRVRDHLHLSCP 67
A P + D P P P LPP P GPP PP+ P
Sbjct: 264 AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP-----P 318
Query: 68 RASQDRPRPSCPLASRDRRRPA--IPRASPDRPRP---ISPAPPGPPTSRQSPRISVAAA 122
PRP PL P +P P P P ++PA PPT+ P
Sbjct: 319 PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGP 378
Query: 123 PVLPAAPRPPTQRR 136
P RPP R
Sbjct: 379 PPTDPYGRPPPYDR 392
Score = 30.0 bits (66), Expect = 1.9
Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 12/90 (13%)
Query: 24 PRPRFLATPRVPGTP----TYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCP 79
P P PR PG T PP +PGPP PP + P + P
Sbjct: 317 PPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMP----- 371
Query: 80 LASRDRRRPAIPRASPDRPRPISPAPPGPP 109
+ D R P P RP P GPP
Sbjct: 372 --TSDSRGPP-PTDPYGRPPPYDRGDYGPP 398
Score = 29.6 bits (65), Expect = 2.5
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 75 RPSCPLASRDRRRPAIPRASP--DR-PRPISPAPPGPP-TSRQSPRISVAAAPVLPAAPR 130
R + P R R R P A P DR P P P P PP + Q+P P P P
Sbjct: 194 RAAFPQGGRGRGR--FPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPG 251
Query: 131 PPTQRRCVPVAQRGLP 146
PP + +P G P
Sbjct: 252 PPPPGQVLPPPLAGPP 267
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 45.1 bits (105), Expect = 6e-05
Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 47 PGPPTTRQPPRVRDHL------HLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRP 100
P PPTTR PP +R HL RP P P A++ R P+ P P P P
Sbjct: 236 PPPPTTRPPP-IRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPPSP 294
Query: 101 ISPAPPGPPTSRQS 114
+ P PP PP + S
Sbjct: 295 LPPPPPPPPPTPSS 308
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 44.3 bits (103), Expect = 1e-04
Identities = 40/126 (31%), Positives = 46/126 (36%), Gaps = 23/126 (18%)
Query: 26 PRFLATPRVPGTPTYQLPP----RIPGPPTTRQP-----------PRVRDHLHLSCPRAS 70
P + P +PG P PP R PGPPT P P L PR
Sbjct: 399 PSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLL 458
Query: 71 QDRPRPSCPLASRDRRRPAIPRASPDR---PRPISPAPPGPPTSRQSPRISVAAAPVL-P 126
P P P P +P P R PR PAPPG P PR + P++ P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIP----PPRPGMMRPPLVPP 514
Query: 127 AAPRPP 132
P PP
Sbjct: 515 LGPAPP 520
Score = 37.7 bits (86), Expect = 0.009
Identities = 36/113 (31%), Positives = 44/113 (38%), Gaps = 26/113 (23%)
Query: 24 PRPRFLATP----RVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCP 79
P PR L R PG P P PGPP PPR+ P PRP
Sbjct: 453 PLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPP-----PRPGM- 506
Query: 80 LASRDRRRPAIPRASPDRPRPISPAPPG--PPTSRQSPRISVAAAPVLPAAPR 130
R P +P P+ PAPPG PP +P + ++A P L P+
Sbjct: 507 -----MRPPLVP--------PLGPAPPGLFPPAPLPNPGV-LSAPPNLIQRPK 545
Score = 36.6 bits (83), Expect = 0.020
Identities = 34/108 (31%), Positives = 38/108 (35%), Gaps = 19/108 (17%)
Query: 26 PRFLATPRVPGT--PTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASR 83
P FL P +PG P +L P PGPP R P P P P
Sbjct: 439 PPFLRPPGMPGLRGPLPRLLP--PGPPPGRPP-------------GPPPGPPPGLPPGPP 483
Query: 84 DRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRP 131
R P PR P P I P PG P + A + P AP P
Sbjct: 484 PRGPP--PRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLP 529
Score = 28.5 bits (62), Expect = 5.6
Identities = 33/113 (29%), Positives = 39/113 (34%), Gaps = 10/113 (8%)
Query: 32 PRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIP 91
P +P P+ L IP P QPP + L + R PL +P
Sbjct: 142 PDMPHAPSNILIQDIPLPGA--QPPSI---LKKTSAYGPPTRAVSILPLLGH-----GVP 191
Query: 92 RASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRG 144
R P R P P P PP Q V A LP R +AQRG
Sbjct: 192 RLPPGRKPPGPPPGPPPPQVVQMYGRKVGFALDLPPRRRDEDMLYSPELAQRG 244
>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
[Homo sapiens]
Length = 757
Score = 43.9 bits (102), Expect = 1e-04
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 85 RRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRG 144
+++PA P P+ P P PP PP +Q + AA+P P APR P RR P G
Sbjct: 18 KQQPAPPPQPPESP----PPPPLPPQQQQPAQPGPAASPAGPPAPRGPGDRRAEPCP--G 71
Query: 145 LPLCGTG 151
LP G
Sbjct: 72 LPAAAMG 78
Score = 28.5 bits (62), Expect = 5.6
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 8/72 (11%)
Query: 8 IRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCP 67
+ SF K +P P+ +P P P Q P PGP + P P
Sbjct: 7 VSSFRGRQGASKQQPAPPPQPPESPPPPPLPPQQQQPAQPGPAASPAGP--------PAP 58
Query: 68 RASQDRPRPSCP 79
R DR CP
Sbjct: 59 RGPGDRRAEPCP 70
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 43.9 bits (102), Expect = 1e-04
Identities = 32/91 (35%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 23 SPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRP---SCP 79
SP P A P P + R P PP P + R SCP R P SC
Sbjct: 349 SPSPPARAAPPCPPCQSPVPQRRSPVPPCP-SPQQRRSPASPSCPSPVPQRRSPVPPSCQ 407
Query: 80 LASRDRRRPAIPRASPDRPRPISPAPPGPPT 110
S RR P P +PRP P PPG T
Sbjct: 408 SPSPQRRSPVPPSCPAPQPRPPPPPPPGERT 438
Score = 42.4 bits (98), Expect = 4e-04
Identities = 44/139 (31%), Positives = 52/139 (37%), Gaps = 17/139 (12%)
Query: 35 PGTPTYQLPPRI--PGPPTTRQPPRVRDHLHLSCPRASQDRP--RPSCPLASRDRRRPAI 90
P P+ P R P PP P+ R + CP Q R PSCP RR P
Sbjct: 345 PQCPSPSPPARAAPPCPPCQSPVPQRRSPVP-PCPSPQQRRSPASPSCPSPVPQRRSPVP 403
Query: 91 PRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGT 150
P P+ SP PP P + PR P P PP +R A P
Sbjct: 404 PSCQSPSPQRRSPVPPSCPAPQ--PR---------PPPPPPPGERTLAERAYAKPPSHHV 452
Query: 151 GLGLETRRPARSCLGETAA 169
G + RR + S L E AA
Sbjct: 453 KAGFQGRR-SYSELAEGAA 470
Score = 28.5 bits (62), Expect = 5.6
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 108 PPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLGLETRRPARSCLGET 167
P + R SP +P PA PP PV QR P+ + R PA
Sbjct: 336 PLSQRHSPAPQ-CPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSP 394
Query: 168 AAPFRFP-RCECKPPTPQRLHP 188
R P C+ P+PQR P
Sbjct: 395 VPQRRSPVPPSCQSPSPQRRSP 416
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 43.9 bits (102), Expect = 1e-04
Identities = 40/129 (31%), Positives = 45/129 (34%), Gaps = 32/129 (24%)
Query: 32 PRVPGTPTYQLPPRIP----------GPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLA 81
PR TP PPR P PP T PP P P+ A
Sbjct: 102 PRRGATPP--APPRAPRGAPAAAAAAAPPPTPAPP-----------------PPPAPVAA 142
Query: 82 SRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVP-- 139
+ R P A+ P PA PGP R +P + AP P A PP R P
Sbjct: 143 AAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPP 202
Query: 140 -VAQRGLPL 147
VA R PL
Sbjct: 203 AVAAREPPL 211
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/145 (24%), Positives = 47/145 (32%), Gaps = 11/145 (7%)
Query: 3 RSHPRIRSFGAAWPEEKADLSPRPRFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHL 62
R P + A P P P A P P P + PR +
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAA 175
Query: 63 HLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAA 122
L+ P + P P A RR P A+ + P P P PP PP +Q P
Sbjct: 176 PLAAPPPAPAAPPAVAPPAG-PRRAPPPAVAAREPPLPPPPQPPAPPQQQQPP------- 227
Query: 123 PVLPAAPRPPTQRRCVPVAQRGLPL 147
P P+PP + V P+
Sbjct: 228 ---PPQPQPPPEGGAVRAGGAARPV 249
Score = 36.6 bits (83), Expect = 0.020
Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 21/125 (16%)
Query: 30 ATPRVP-GTPTYQL---PPRIPGPPTTRQP---------PRVRDHLHLSCPRASQDRPRP 76
A PR P G P PP P PP P PR + P +P P
Sbjct: 110 APPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGP 169
Query: 77 SCPLASRDRRRPAIPRASPDRPRPISP--APPGPPTSRQSPRISVAAAPVLPAAPRPPTQ 134
A+ P P A P P P APP +R+ P P P P PP Q
Sbjct: 170 RAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPP------LPPPPQPPAPPQQ 223
Query: 135 RRCVP 139
++ P
Sbjct: 224 QQPPP 228
Score = 36.2 bits (82), Expect = 0.027
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 59 RDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRIS 118
R+ + PR P P P A R A A P P +P PP P + +P +
Sbjct: 94 RNAARVQPPRRGATPPAP--PRAPRGAPAAAAAAAPPPTP---APPPPPAPVAAAAPARA 148
Query: 119 VAAAPVLPAAPRPPTQRRCVPVAQRGLPL 147
AA AP P + P AQR PL
Sbjct: 149 PRAAAAAATAPPSPGPAQPGPRAQRAAPL 177
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 43.5 bits (101), Expect = 2e-04
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query: 15 WPEEKADLSPRP-RFLATPRVPGTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDR 73
+P E L P+P R A P PR P P + QPP L P+ R
Sbjct: 31 YPREPPRLEPQPYREPARAEPPA-------PREPAPRSDAQPPSREKPL----PQREVSR 79
Query: 74 PRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSR-----QSPRISVAAAPVLPAA 128
P L R+ RP P P P P+ P PP SR + PR +V VL
Sbjct: 80 AEPPMSL-QREPPRPEPPPPFP--PLPLQPPPPRESASRAEQPPRPPRETVRLELVL--- 133
Query: 129 PRPPTQRRCVPVAQRGLPLCG 149
+ PT CV + L LCG
Sbjct: 134 -KDPTDESCVEFSYPELLLCG 153
Score = 28.9 bits (63), Expect = 4.3
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 8/115 (6%)
Query: 30 ATPRVPGTPTYQLPPR-IPGPPTTRQP-PRVRDHLHLSCPRASQDRPRPSCPLASRDRRR 87
A+P++ +P P+ +P P + P P + +S S+ P P P S
Sbjct: 1035 ASPKLAASPKPATSPKPLPSPKPSASPKPSLSAKPSVSTKLISKSNPTPK-PTVSPSSSS 1093
Query: 88 PAIPRASPDRPRPISPA---PPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVP 139
P A SP P G SRQSP +++ P + PPT+ P
Sbjct: 1094 PNALVAQGSHSSTNSPVHKQPSGMNISRQSPTLNL--LPSSRTSGLPPTKNLQAP 1146
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,488,389
Number of Sequences: 37866
Number of extensions: 1062559
Number of successful extensions: 15973
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 1445
Number of HSP's that attempted gapping in prelim test: 8230
Number of HSP's gapped (non-prelim): 6316
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.