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Name: KCNC3 Sequence: fasta or formatted (757aa) NCBI GI: 24497460
Description:

Shaw-related voltage-gated potassium channel protein 3

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         81           4
 C cysteine            2.1         16           2
 D aspartate           4.8         36           2
 E glutamate           4.6         35           3
 F phenylalanine       4.6         35           3
 G glycine            11.4         86           5
 H histidine           2.4         18           2
 I isoleucine          4.8         36           2
 K lysine              2.9         22           3
 L leucine             8.1         61           3
 M methionine          1.8         14           1
 N asparagine          2.5         19           2
 P proline            12.8         97           7
 Q glutamine           2.4         18           4
 R arginine            5.3         40           2
 S serine              4.9         37           2
 T threonine           4.6         35           2
 V valine              5.0         38           2
 W tryptophan          1.6         12           2
 Y tyrosine            2.8         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Shaw-related voltage-gated potassium channel protein... 
KCNC1                 0.497   Shaw-related voltage-gated potassium channel protei...
KCNC1                 0.468   Shaw-related voltage-gated potassium channel protein ...
KCNC4                 0.439   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.439   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.439   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.422   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.422   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.422   Shaw-related voltage-gated potassium channel protein...
KCNB2                 0.167   potassium voltage-gated channel, Shab-related subfam...
KCNA6                 0.156   potassium voltage-gated channel, shaker-related subfa...
KCND1                 0.150   potassium voltage-gated channel, Shal-related subfam...
KCND2                 0.145   potassium voltage-gated channel, Shal-related subfami...
KCNF1                 0.142   potassium voltage-gated channel, subfamily F, member...
KCND3                 0.142   potassium voltage-gated channel, Shal-related subfam...
KCND3                 0.142   potassium voltage-gated channel, Shal-related subfam...
KCNA1                 0.138   potassium voltage-gated channel subfamily A member ...
KCNA7                 0.135   potassium voltage-gated channel, shaker-related subf...
KCNA4                 0.134   potassium voltage-gated channel, shaker-related subfa...
KCNA10                0.133   potassium voltage-gated channel, shaker-related subfa...
KCNA5                 0.132   potassium voltage-gated channel, shaker-related subf...
KCNS3                 0.132   potassium voltage-gated channel delayed-rectifier pr...
KCNA3                 0.130   potassium voltage-gated channel, shaker-related subf...
KCNA2                 0.130   potassium voltage-gated channel, shaker-related subfa...
KCNS1                 0.129   potassium voltage-gated channel delayed-rectifier pr...
KCNG1                 0.127   potassium voltage-gated channel, subfamily G, member...
KCNS2                 0.127   potassium voltage-gated channel, delayed-rectifier, ...
KCNB1                 0.125   potassium voltage-gated channel, Shab-related subfami...
KCNG2                 0.123   potassium voltage-gated channel, subfamily G, member ...
KCNG3                 0.120   potassium voltage-gated channel, subfamily G, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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