LOC100288568 18249

Name: LOC100288568	Sequence: fasta or formatted (244aa)		NCBI GI: 239745038
Description: PREDICTED: hypothetical protein XP_002343338		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 23 3 C cysteine 3.3 8 1 D aspartate 3.3 8 1 E glutamate 2.0 5 2 F phenylalanine 2.5 6 1 G glycine 5.7 14 1 H histidine 2.5 6 1 I isoleucine 2.9 7 1 K lysine 0.8 2 1 L leucine 6.6 16 1 M methionine 0.8 2 1 N asparagine 0.0 0 0 P proline 18.4 45 2 Q glutamine 4.1 10 1 R arginine 15.6 38 3 S serine 8.2 20 3 T threonine 7.0 17 2 V valine 4.5 11 1 W tryptophan 1.2 3 1 Y tyrosine 1.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343338 LOC100131880 0.655 PREDICTED: hypothetical protein LOC100131880 0.320 PREDICTED: hypothetical protein PRG4 0.061 proteoglycan 4 isoform D PRG4 0.061 proteoglycan 4 isoform C PRG4 0.061 proteoglycan 4 isoform B PRG4 0.061 proteoglycan 4 isoform A ESX1 0.057 extraembryonic, spermatogenesis, homeobox 1-like [Ho... FLJ22184 0.055 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.055 PREDICTED: hypothetical protein LOC80164 MUC2 0.055 mucin 2 precursor SETD1A 0.053 SET domain containing 1A NACA 0.053 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.051 PREDICTED: hypothetical protein FLJ22184 SRRM1 0.049 serine/arginine repetitive matrix 1 SYNJ1 0.045 synaptojanin 1 isoform c LOC388906 0.045 PREDICTED: hypothetical protein LOC388906 0.045 PREDICTED: hypothetical protein LOC388906 0.045 PREDICTED: hypothetical protein CASKIN1 0.043 CASK interacting protein 1 RAPH1 0.043 Ras association and pleckstrin homology domains 1 is... WIPF1 0.043 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.043 WAS/WASL interacting protein family, member 1 CPSF6 0.041 cleavage and polyadenylation specific factor 6, 68 ... LOC645529 0.041 PREDICTED: similar to Putative acrosin-like proteas... WBP11 0.039 WW domain binding protein 11 KCNC3 0.039 Shaw-related voltage-gated potassium channel protein... TBKBP1 0.039 TBK1 binding protein 1 SAMD1 0.039 sterile alpha motif domain containing 1 UBN2 0.039 ubinuclein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.