LOC100287343 17993

Name: LOC100287343	Sequence: fasta or formatted (106aa)		NCBI GI: 239744409
Description: PREDICTED: hypothetical protein XP_002343155		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.2 15 2 C cysteine 2.8 3 1 D aspartate 1.9 2 1 E glutamate 4.7 5 1 F phenylalanine 0.9 1 1 G glycine 13.2 14 1 H histidine 1.9 2 1 I isoleucine 0.0 0 0 K lysine 0.9 1 1 L leucine 5.7 6 1 M methionine 0.9 1 1 N asparagine 0.9 1 1 P proline 12.3 13 2 Q glutamine 3.8 4 1 R arginine 17.0 18 2 S serine 13.2 14 1 T threonine 1.9 2 1 V valine 2.8 3 1 W tryptophan 0.0 0 0 Y tyrosine 0.9 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343155 LOC100290722 0.990 PREDICTED: hypothetical protein XP_002347292 COL7A1 0.098 alpha 1 type VII collagen precursor C17orf65 0.083 hypothetical protein LOC339201 LOC645321 0.078 PREDICTED: hypothetical protein LOC645321 0.078 PREDICTED: hypothetical protein COL5A1 0.078 alpha 1 type V collagen preproprotein COL1A2 0.073 alpha 2 type I collagen COL11A2 0.073 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.073 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.073 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL4A4 0.073 alpha 4 type IV collagen precursor COL5A2 0.067 alpha 2 type V collagen preproprotein COL28A1 0.067 collagen, type XXVIII precursor COL9A1 0.067 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.067 alpha 1 type IX collagen isoform 2 precursor COL2A1 0.062 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.062 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A5 0.062 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.062 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.062 type IV collagen alpha 5 isoform 3 precursor LOC100128440 0.062 PREDICTED: hypothetical protein LOC100128440 0.062 PREDICTED: hypothetical protein LOC100128440 0.062 PREDICTED: hypothetical protein C10orf47 0.062 hypothetical protein LOC254427 COL3A1 0.062 collagen type III alpha 1 preproprotein COL8A2 0.062 collagen, type VIII, alpha 2 COL11A1 0.057 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.057 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.057 alpha 1 type XI collagen isoform A preproprotein [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.