Search of human proteins with 239743999

Search of human proteins with 239743999

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239743999 PREDICTED: hypothetical protein XP_002343003 [Homo
sapiens]
         (203 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755259 PREDICTED: hypothetical protein [Homo sapiens]           420   e-118
gi|239749744 PREDICTED: hypothetical protein XP_002347155 [Homo ...   420   e-118
gi|239743999 PREDICTED: hypothetical protein XP_002343003 [Homo ...   420   e-118
gi|153792780 additional sex combs like 2 [Homo sapiens]                42   4e-04
gi|56549696 E1A binding protein p400 [Homo sapiens]                    39   0.004
gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]             38   0.005
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    38   0.007
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]         38   0.007
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]            37   0.009
gi|239751337 PREDICTED: hypothetical protein [Homo sapiens]            37   0.012
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]            36   0.020
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ...    36   0.020
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ...    36   0.020
gi|153791535 general control of amino acid synthesis 5-like 2 [H...    36   0.020
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom...    36   0.020
gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo ...    36   0.026
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa...    35   0.034
gi|40353727 synaptopodin isoform A [Homo sapiens]                      35   0.044
gi|122937233 discs, large (Drosophila) homolog-associated protei...    35   0.057
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       35   0.057
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       35   0.057
gi|145699105 connexin40.1 [Homo sapiens]                               35   0.057
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            34   0.075
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ...    34   0.075
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote...    34   0.075
gi|169167405 PREDICTED: hypothetical protein [Homo sapiens]            34   0.097
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]               34   0.097
gi|45439359 triple functional domain (PTPRF interacting) [Homo s...    34   0.097
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        34   0.097
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ...    33   0.13 

>gi|239755259 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 203

 Score =  420 bits (1080), Expect = e-118
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL 60
           MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL
Sbjct: 1   MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL 60

Query: 61  PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP 120
           PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP
Sbjct: 61  PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP 120

Query: 121 QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP 180
           QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP
Sbjct: 121 QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP 180

Query: 181 PLKVCGRGWLITFVIRLRDPAPR 203
           PLKVCGRGWLITFVIRLRDPAPR
Sbjct: 181 PLKVCGRGWLITFVIRLRDPAPR 203


>gi|239749744 PREDICTED: hypothetical protein XP_002347155 [Homo
           sapiens]
          Length = 203

 Score =  420 bits (1080), Expect = e-118
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL 60
           MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL
Sbjct: 1   MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL 60

Query: 61  PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP 120
           PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP
Sbjct: 61  PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP 120

Query: 121 QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP 180
           QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP
Sbjct: 121 QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP 180

Query: 181 PLKVCGRGWLITFVIRLRDPAPR 203
           PLKVCGRGWLITFVIRLRDPAPR
Sbjct: 181 PLKVCGRGWLITFVIRLRDPAPR 203


>gi|239743999 PREDICTED: hypothetical protein XP_002343003 [Homo
           sapiens]
          Length = 203

 Score =  420 bits (1080), Expect = e-118
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL 60
           MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL
Sbjct: 1   MLEMPRSLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQEAFAATLRL 60

Query: 61  PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP 120
           PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP
Sbjct: 61  PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQP 120

Query: 121 QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP 180
           QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP
Sbjct: 121 QASAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAP 180

Query: 181 PLKVCGRGWLITFVIRLRDPAPR 203
           PLKVCGRGWLITFVIRLRDPAPR
Sbjct: 181 PLKVCGRGWLITFVIRLRDPAPR 203


>gi|153792780 additional sex combs like 2 [Homo sapiens]
          Length = 1435

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 46  AEAERQEAFAATLRLPQGWSGWASEG--VPGAGPGAGR-------GWSGKGSAPLRPR-- 94
           A+A+  +A  A        +  AS G  +PG GPG G+       G + +G +P   R  
Sbjct: 662 AKAQLVKAQRAAAAAAAAAAAAASVGGTIPGPGPGGGQGPGEGGEGQTARGGSPGSDRVS 721

Query: 95  -SEKQPQVQ----HRTHSPRKVAPKTMGVQPQASAERTPAALTPCNTGTEQRTRPVSAPR 149
            + K P ++          R++ P     QPQ+  + TP+   P +    Q  +    P 
Sbjct: 722 ETGKGPTLELAGTGSRGGTRELLPCGPETQPQSETKTTPSQAQPHSVSGAQLQQTPPVPP 781

Query: 150 AGAHSAAASSTPDPTHIRR 168
             A S A +S P P HI +
Sbjct: 782 TPAVSGACTSVPSPAHIEK 800


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 13/127 (10%)

Query: 68   ASEGVPGAGPGAGRGWSGKGSAPLR--PRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAE 125
            ++   P A P A +  + +   P++   + E +      TH PR  AP T    PQ    
Sbjct: 1407 STSAAPAARPAAAKLKASRLFQPVQYGQKPEGRTVAFPSTHPPRTAAPTTASAAPQGPLR 1466

Query: 126  -RTPAALTPCNTGTEQRTRPVSAPRAGAH------SAAASSTPDPTHIRRTALQTCLQ-- 176
             R P A    N   +    P    +A A       ++A+S+   P H  +   QT  Q  
Sbjct: 1467 GRPPIATFSANPEAKAAAAPFQTSQASASAPRHQPASASSTAASPAHPAKLRAQTTAQAS 1526

Query: 177  --GQAPP 181
              GQ PP
Sbjct: 1527 TPGQPPP 1533


>gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]
          Length = 740

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 7/97 (7%)

Query: 69  SEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHR-THSPRKVAPKTMGVQPQASAERT 127
           S+   G  P      +G  ++ + PR+    + QHR  H+P  V      ++P  SA  T
Sbjct: 423 SDAREGTAPSTTNSVAGHSNSSVFPRAASTTRTQHRGEHAPELV------LEPDISAAST 476

Query: 128 PAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPT 164
           P A            R +S+P+ G  + A    P+P+
Sbjct: 477 PLASKLLGPFPTSWDRSISSPQPGQRTHATPQAPNPS 513


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 13/106 (12%)

Query: 67  WASEGVP-GAGPGAGRGWS-GKGSAPLRPRSEKQPQVQHRT--HSPRKVAPKTMGVQPQA 122
           WA   V  G G G GRGW   +G  P    S+ +   +     HS   VAP ++      
Sbjct: 84  WAGPRVQRGRGRGRGRGWGPSRGCVPEEESSDGESDEEEFQGFHSDEDVAPSSL-----R 138

Query: 123 SAERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRR 168
           SA R+     P   G + +T P+  PR     A  + TP  T  R+
Sbjct: 139 SALRSQRGRAPRGRGRKHKTTPLPPPRL----ADVAPTPPKTPARK 180


>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
          Length = 1445

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 40/132 (30%), Positives = 52/132 (39%), Gaps = 18/132 (13%)

Query: 83  WSGKGSAPLRPRSEKQPQVQ--HRTHSPRKVAPKTMGVQPQ--ASAERTPAALTPCNTGT 138
           WSG+  AP  P+S   P      R  S  KV P  +G +PQ      RT +   P  +G 
Sbjct: 861 WSGEAQAPPFPQSTFTPWASWVSRVESVPKV-PIFLGKRPQNGPGDNRTTSKSVPTVSG- 918

Query: 139 EQRTRPVSAP---RAGAHSAAASSTPDPTHIRRTALQTCLQG----QAPPLKVCGRGWLI 191
                P++AP   + G       S    TH R  A  T  +G    Q P   + GR W  
Sbjct: 919 -----PLAAPPPEQEGVQRPPRGSQSADTHGRSEAFPTGHKGRGCSQPPTCSLVGRTWQS 973

Query: 192 TFVIRLRDPAPR 203
             V+    P PR
Sbjct: 974 RTVLESGKPKPR 985


>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1230

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 38/156 (24%), Positives = 56/156 (35%), Gaps = 18/156 (11%)

Query: 7   SLMSTSGWFFSRLSSTNFFRDLDMVCTE----QQQSTWAMTASAEAERQEAF--AATLRL 60
           S  S SGW  S  S  +   D   VC         ++WA   S       +   A+TL +
Sbjct: 264 STSSDSGWASSSASWDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSV 323

Query: 61  PQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEK---QPQVQHRTHSPRK--VAPKT 115
               SGWAS    GA   +  GW+   ++ +   S+     P     + S      +P  
Sbjct: 324 ----SGWASFSASGASAPSDSGWTSHSASGVSTTSDSGWASPSASGASTSSDSGWASPSA 379

Query: 116 MGVQPQASAERTPAA---LTPCNTGTEQRTRPVSAP 148
               P AS   TP+     +P  +G    + P   P
Sbjct: 380 SWASPSASGASTPSDSGWASPSASGASMPSAPSLCP 415



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 40/177 (22%), Positives = 60/177 (33%), Gaps = 35/177 (19%)

Query: 7   SLMSTSGWFFSRLSSTNFFRDLDMVCTEQQQSTWAMTASAEAERQE-----AFAATLRLP 61
           S  S SGW     S  +   D          S WA  +++ A         +F+A+    
Sbjct: 29  STPSNSGWASPSASGASIPSD----------SGWASPSASGASTPSNSGWASFSASWASI 78

Query: 62  QGWSGWASEGVPGAGPGAGRGW---SGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGV 118
              SGWAS     A   +  GW   S  G++         P V   +       P     
Sbjct: 79  PSDSGWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGAS------IPSAFWA 132

Query: 119 QPQASAERTPA-----------ALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPT 164
            P AS   TP+           A T  ++G    +   ++P A   S++AS    P+
Sbjct: 133 SPSASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGASTPS 189


>gi|239751337 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 236

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 78  GAGRGWSGKGSA--PLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAALTPCN 135
           GA RG +G  +   P RPR    P   HR  S R+ AP+  G+ P  S  R P AL PC 
Sbjct: 98  GASRGLAGSQAKAEPTRPRRPPPPSRGHREKSGRETAPR--GLPPWESQPR-PRAL-PCR 153

Query: 136 TGT 138
            GT
Sbjct: 154 RGT 156


>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 71  GVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAA 130
           GV   G  A     GKG  PLR      P    R  + R+ A    G+ P A+  R PA 
Sbjct: 109 GVTPKGTNARACVLGKGGPPLR-----SPGSSGRRQAARRGAGT--GLYP-AAQRRAPAP 160

Query: 131 LTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAPPLKVCG 186
           L PC     +R  P +A R G+ + +  + P    + +   Q+C   ++P  +  G
Sbjct: 161 LRPCAIPAPRR--PAAAARLGSAARSPGAPPAGRSLAQPHPQSCPLARSPAYRSTG 214


>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
           sapiens]
          Length = 250

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 71  GVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAA 130
           GV   G  A     GKG  PLR      P    R  + R+ A    G+ P A+  R PA 
Sbjct: 62  GVTPKGTNARACVLGKGGPPLR-----SPGSSGRRQAARRGAGT--GLYP-AAQRRAPAP 113

Query: 131 LTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAPPLKVCG 186
           L PC     +R  P +A R G+ + +  + P    + +   Q+C   ++P  +  G
Sbjct: 114 LRPCAIPAPRR--PAAAARLGSAARSPGAPPAGRSLAQPHPQSCPLARSPAYRSTG 167


>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
           sapiens]
          Length = 250

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 71  GVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAA 130
           GV   G  A     GKG  PLR      P    R  + R+ A    G+ P A+  R PA 
Sbjct: 62  GVTPKGTNARACVLGKGGPPLR-----SPGSSGRRQAARRGAGT--GLYP-AAQRRAPAP 113

Query: 131 LTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAPPLKVCG 186
           L PC     +R  P +A R G+ + +  + P    + +   Q+C   ++P  +  G
Sbjct: 114 LRPCAIPAPRR--PAAAARLGSAARSPGAPPAGRSLAQPHPQSCPLARSPAYRSTG 167


>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
           sapiens]
          Length = 837

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 10/87 (11%)

Query: 76  GPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHS----PRKVAPKTMGVQPQASAERTPAAL 131
           GPG G G +G G  P RP   +Q +   R       PR    + +GV     A  T    
Sbjct: 62  GPGVGSGGAGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANET---- 117

Query: 132 TPCNTGTEQRTRPVSAPRAGAHSAAAS 158
             C     +  +P +APR      AA+
Sbjct: 118 --CKCNGWKNPKPPTAPRMDLQQPAAN 142


>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
           sapiens]
          Length = 999

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 14/127 (11%)

Query: 73  PGAGPGAGRGWSG-KGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQAS-------- 123
           P  G GAG  WSG K    +  R     Q      SP  + P   G   Q S        
Sbjct: 68  PARGSGAGSRWSGFKKRKQVLDRVFSSSQPNLCCSSPEPLEPGGAGRAEQGSTLRRRIRE 127

Query: 124 ----AERTPAALTPCNTGTEQRTR-PVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQ 178
               A + PAA +    GT    R P SAP + + S++ SS+P P      A     + Q
Sbjct: 128 HLLPAVKGPAAASGAAGGTPPGGRSPDSAPSSSSASSSLSSSPQPPPRGDRARDEGARRQ 187

Query: 179 APPLKVC 185
            P   +C
Sbjct: 188 GPGAHLC 194


>gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo
           sapiens]
          Length = 963

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 66  GWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAE 125
           G A  G  GAG G+G+  SG   +P +P  ++Q Q   +  +P K+A  T       SA 
Sbjct: 5   GGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSS-SSSTSAA 63

Query: 126 RTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHI 166
              ++ +  +T         SAP  G        TP P  +
Sbjct: 64  AASSSSSSTSTSMAVAVASGSAPPGG---PGPGRTPAPVQM 101



 Score = 34.3 bits (77), Expect = 0.075
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 68  ASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERT 127
           A  G  G GPG   G SG+  + +    ++ P  Q +   P++  P  +     +S+  +
Sbjct: 2   AERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTS 61

Query: 128 PAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDP 163
            AA +  ++ T       S   A A  +A    P P
Sbjct: 62  AAAASSSSSSTS-----TSMAVAVASGSAPPGGPGP 92


>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
           sapiens]
          Length = 2715

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 73  PGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAP-KTMGVQPQASAERTPAAL 131
           PG   GA +G   +   P R R  K+P+   +   P+K    K    +  A   R P   
Sbjct: 101 PGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREA 160

Query: 132 TPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRR 168
           +      E+R+   SA R  +  A+    P P   ++
Sbjct: 161 SGTKEAKEKRSCTDSAARTKSRKASKEQGPTPVEKKK 197


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 34/136 (25%), Positives = 47/136 (34%), Gaps = 31/136 (22%)

Query: 59  RLPQGWSGWASEGV--PGAG------------PGAGRGWSGKGSAPLRPRSEKQPQVQH- 103
           R P    GW S G   PG G            P     WS +  +PLRP +E +P  +  
Sbjct: 694 RPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPSRQL 753

Query: 104 ---------RTHSPRKVAPKTMGVQ-------PQASAERTPAALTPCNTGTEQRTRPVSA 147
                         +  +P++ G +       P+A     P    P    + Q  RP SA
Sbjct: 754 QALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSA 813

Query: 148 PRAGAHSAAASSTPDP 163
              GA  A    +P P
Sbjct: 814 AVPGAAFAPIPRSPLP 829


>gi|122937233 discs, large (Drosophila) homolog-associated protein 3
           [Homo sapiens]
          Length = 979

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 71  GVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQ 119
           G  GAGPG      G G+AP  PRSE   +++H  HS +K+  K+  ++
Sbjct: 144 GPAGAGPGPA---PGTGTAP-EPRSESPSRIRHLVHSVQKLFAKSHSLE 188


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 9/115 (7%)

Query: 71  GVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAA 130
           G P  GPG  R        PL+ R   Q Q       P   +P    +    SA + PA+
Sbjct: 466 GPPQPGPGPQRQ-----GPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPAS 520

Query: 131 -LTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIR---RTALQTCLQGQAPP 181
              P   G  +++RPV+       +A   ++P P       +   QT + G APP
Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP 575



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/91 (27%), Positives = 31/91 (34%), Gaps = 6/91 (6%)

Query: 62  QGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQ 121
           QG       G PGA P A        ++P   R    PQ   +T       PK  G  P 
Sbjct: 529 QGRQSRPVAGGPGAPPAAR-----PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPG 583

Query: 122 ASAERTPAALTPCNTG-TEQRTRPVSAPRAG 151
               + P    P   G T Q ++    PR G
Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTG 614


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 9/115 (7%)

Query: 71  GVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAA 130
           G P  GPG  R        PL+ R   Q Q       P   +P    +    SA + PA+
Sbjct: 466 GPPQPGPGPQRQ-----GPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPAS 520

Query: 131 -LTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIR---RTALQTCLQGQAPP 181
              P   G  +++RPV+       +A   ++P P       +   QT + G APP
Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP 575



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/91 (27%), Positives = 31/91 (34%), Gaps = 6/91 (6%)

Query: 62  QGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQ 121
           QG       G PGA P A        ++P   R    PQ   +T       PK  G  P 
Sbjct: 529 QGRQSRPVAGGPGAPPAAR-----PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPG 583

Query: 122 ASAERTPAALTPCNTG-TEQRTRPVSAPRAG 151
               + P    P   G T Q ++    PR G
Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTG 614


>gi|145699105 connexin40.1 [Homo sapiens]
          Length = 370

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 3/99 (3%)

Query: 66  GWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSP-RKVAPKTMGVQPQASA 124
           G   EG P A PGA  G  G GS     R     ++     S     A + +G QP+   
Sbjct: 256 GREEEGAP-APPGARAGGEGAGSPRRTSRVSGHTKIPDEDESEVTSSASEKLGRQPRGRP 314

Query: 125 ERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDP 163
            R  AA  P  +G+E++     +  A   S ++   PDP
Sbjct: 315 HRE-AAQDPRGSGSEEQPSAAPSRLAAPPSCSSLQPPDP 352


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 13/120 (10%)

Query: 45  SAEAERQEAFAATLRLPQGWSGWASEGVPG-AGPGAGRGWSGKGSAPLRPRSEKQPQVQH 103
           SA A   E   A L+  + W     EG P  A  G GRGW G G    R           
Sbjct: 75  SAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRA---------- 124

Query: 104 RTHSPRKVAPKTMGVQP-QASAERTPAALTPCNTGTEQRTRPVSAPR-AGAHSAAASSTP 161
            T + R  A + +  +P + +A R P          E R+  +++PR + A +  AS  P
Sbjct: 125 VTAARRGGASRPLAGEPWREAARRRPQQCPQWGRARESRSAALASPRVSNAPTTPASRNP 184


>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
           sapiens]
          Length = 224

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 4/111 (3%)

Query: 45  SAEAERQEAFAATLRLPQGWSGWASEGVPG-AGPGAGRGWSGKGSAPLRPRSEKQPQVQH 103
           SA A   E   A L+  + W     EG P  A  G GRGW G G    R  +  +     
Sbjct: 27  SAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGEWG 86

Query: 104 RTHSPRKVAPKTMGVQPQASAERTPAALTPCNTGTEQRTRPVSAPRAGAHS 154
           R    R  A  +  V   ++A  TPA+  P     E+++   +A   GA +
Sbjct: 87  RARESRSAALASPRV---SNAPTTPASRNPGLRAQERQSGRRAAGGGGARA 134


>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
           1 [Homo sapiens]
          Length = 828

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 20/138 (14%)

Query: 73  PGAGPGAGRGWSGKGSAPLRP-------RSEKQPQVQHRTHSPRKVAPKTMGVQPQASAE 125
           PG G G G G +   S+P RP       RS   P    R  S  K+ P   GV   +   
Sbjct: 426 PGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKPGVGDVS--- 482

Query: 126 RTPAALTPCNTGTEQRTRPVSAPRAGAHSAAASSTPDPTHIRRTALQTCLQGQAPPLKVC 185
                  P +      + P  AP A A S ++ S+   T+    A    ++ + P L   
Sbjct: 483 ------RPFSPPIHSSSPPPIAPLARAESTSSISS---TNSLSAATTPTVENEQPSLVWF 533

Query: 186 GRG-WLITFVIRLRDPAP 202
            RG + +TF    R P+P
Sbjct: 534 DRGKFYLTFEGSSRGPSP 551


>gi|169167405 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 141

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 36/135 (26%), Positives = 50/135 (37%), Gaps = 4/135 (2%)

Query: 40  WAMTASAEAERQEAFAATLRLPQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQP 99
           WA  A  E     + A+  R+ Q   G A  G     PGAG G   +G A  RP+   +P
Sbjct: 3   WAGRAREETPGPASTASRTRVHQQRRGSAPRGGESPDPGAGAG-DRRGGARQRPQRLSEP 61

Query: 100 QVQHRTHSPRKVAPKTMGVQPQAS--AERTPAALTPCNTGTEQRTRPVSAPRAGAHSAAA 157
           +       P   A   +G+ P  +  +   P   +P      +R     A R       A
Sbjct: 62  RQPQAVPVP-GAASYRLGLPPTLTSLSSSVPGRASPAARLRNRRPGCSLATRLRPDGVWA 120

Query: 158 SSTPDPTHIRRTALQ 172
           +S P P   RR   Q
Sbjct: 121 TSGPAPLTPRRAGDQ 135


>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
          Length = 532

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 23/107 (21%)

Query: 68  ASEGVPGAGP----GAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQAS 123
           A++GVP   P    G G G  G   A +   + K  ++     + R VAP T    P + 
Sbjct: 377 ATKGVPATNPAPGKGTGSGLIGASGATMPTDTSKSEKL-----ASRAVAPPT----PASK 427

Query: 124 AERTPAALTPCNTGTEQRTRPVSAPR--------AGAHSAAASSTPD 162
            +    + TP  +G E RT P  A +        AG  S+++ S PD
Sbjct: 428 RDCVKGSATP--SGQESRTAPGEARKAATLPEMSAGEESSSSDSDPD 472


>gi|45439359 triple functional domain (PTPRF interacting) [Homo
            sapiens]
          Length = 3097

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 37/145 (25%), Positives = 47/145 (32%), Gaps = 29/145 (20%)

Query: 63   GWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQA 122
            G  G    G P  G G   G S  G AP   RS      Q   H P  +       Q +A
Sbjct: 2304 GGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPVRHHPPVLVSSAASSQAEA 2363

Query: 123  ---SAERTPAALTP--------------------CNTGTEQRTRPV------SAPRAGAH 153
               S   TP    P                       G+E+   P+       +PR GA 
Sbjct: 2364 DKMSGTSTPGPSLPPPGAAPEAGPSAPSRRPPGADAEGSEREAEPIPKMKVLESPRKGAA 2423

Query: 154  SAAASSTPDPTHIRRTALQTCLQGQ 178
            +A+ SS   P    R +L T   G+
Sbjct: 2424 NASGSSPDAPAKDARASLGTLPLGK 2448


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 84  SGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAALTPCNTGTEQRTR 143
           S  GS+  + +S   P+    + SP    PK     P   +  + +      +GT  R  
Sbjct: 797 SRSGSSQPKAKSRTPPRRSRSSSSP---PPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQG 853

Query: 144 PVSAPRAGAHS------AAASSTPDPTHIRRTALQTCLQGQAPP 181
            +++P+A   S      +   S+PDP    RT  +    G +PP
Sbjct: 854 SITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPP 897



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 95  SEKQPQVQHRTHSPRKVAPKTMGVQPQASAERTPAALTPCNTGTEQ-RTRPVSAPRAGAH 153
           S   P+++ RT S    +    G  P      TP   +P  + + Q + + + +PR  +H
Sbjct: 875 SSPDPELKSRTPSRHSCS----GSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSH 930

Query: 154 SAAASSTPDPTHIRRT 169
           S ++S +P     R T
Sbjct: 931 SGSSSPSPSRVTSRTT 946


>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
           sapiens]
          Length = 159

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 59  RLPQGWSGWASEGVPGAGPGAGRGWSGKGSAPLRPRSEKQPQVQHRTHSPRKVAPKTMGV 118
           RLP+  SG   EGV G GP A      +   P  P S  QPQ   RT  P    P  +  
Sbjct: 74  RLPRT-SGSPEEGVSGHGPAAAASLP-RAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDP 131

Query: 119 QPQASA 124
            P   A
Sbjct: 132 APSRPA 137


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.127    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,439,345
Number of Sequences: 37866
Number of extensions: 502182
Number of successful extensions: 4053
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 3741
Number of HSP's gapped (non-prelim): 625
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.