PACS1 25137

Name: PACS1	Sequence: fasta or formatted (963aa)		NCBI GI: 30089916
Description: phosphofurin acidic cluster sorting protein 1		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 55 4 C cysteine 0.7 7 1 D aspartate 5.4 52 2 E glutamate 6.0 58 5 F phenylalanine 2.6 25 2 G glycine 6.6 64 3 H histidine 1.6 15 1 I isoleucine 3.7 36 2 K lysine 6.7 65 2 L leucine 8.8 85 2 M methionine 2.3 22 1 N asparagine 2.5 24 1 P proline 6.9 66 3 Q glutamine 5.8 56 6 R arginine 4.8 46 3 S serine 13.5 130 6 T threonine 5.7 55 2 V valine 7.7 74 2 W tryptophan 0.8 8 1 Y tyrosine 2.1 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosphofurin acidic cluster sorting protein 1 PACS2 0.514 phosphofurin acidic cluster sorting protein 2 isofo... PACS2 0.512 phosphofurin acidic cluster sorting protein 2 isofo... LOC100133142 0.017 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.017 PREDICTED: similar to zinc finger protein 208 [Homo... SFPQ 0.016 splicing factor proline/glutamine rich (polypyrimidin... DACH1 0.014 dachshund homolog 1 isoform b DACH1 0.014 dachshund homolog 1 isoform a DACH1 0.014 dachshund homolog 1 isoform c C6orf174 0.014 hypothetical protein LOC387104 SRRM2 0.014 splicing coactivator subunit SRm300 TRIO 0.014 triple functional domain (PTPRF interacting) MEX3D 0.014 ring finger and KH domain containing 1 PRDM6 0.013 PR domain containing 6 HOXA4 0.012 homeobox A4 MLL 0.012 myeloid/lymphoid or mixed-lineage leukemia protein [... HOXD9 0.012 homeobox D9 MAP6 0.012 microtubule-associated protein 6 isoform 2 MAP6 0.012 microtubule-associated protein 6 isoform 1 HOXA10 0.011 homeobox A10 isoform a ZBTB4 0.011 zinc finger and BTB domain containing 4 ZBTB4 0.011 zinc finger and BTB domain containing 4 ATXN2 0.011 ataxin 2 WTIP 0.011 Wilms tumor 1 interacting protein RANBP9 0.011 RAN binding protein 9 BEND4 0.011 BEN domain containing 4 isoform b BEND4 0.011 BEN domain containing 4 isoform a HNRNPUL1 0.011 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.011 heterogeneous nuclear ribonucleoprotein U-like 1 iso... SYN1 0.010 synapsin I isoform Ia Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.