Guide to the Human Genome
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Name: C9orf79 Sequence: fasta or formatted (1445aa) NCBI GI: 155029550
Description:

chromosome 9 open reading frame 79

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         98           2
 C cysteine            2.2         32           2
 D aspartate           3.8         55           2
 E glutamate           5.3         77           2
 F phenylalanine       1.7         25           1
 G glycine             8.2        118           2
 H histidine           3.7         53           3
 I isoleucine          2.1         31           1
 K lysine              5.3         76           2
 L leucine             8.8        127           4
 M methionine          1.7         25           2
 N asparagine          1.5         22           1
 P proline            12.0        173           4
 Q glutamine           6.8         98           2
 R arginine            6.4         92           2
 S serine             11.1        161           2
 T threonine           4.9         71           2
 V valine              4.7         68           2
 W tryptophan          2.4         35           2
 Y tyrosine            0.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 9 open reading frame 79 
FAM75A2               0.175   hypothetical protein LOC642265 
FAM75A1               0.174   hypothetical protein LOC647060 
FAM75A6               0.174   hypothetical protein LOC389730 
FAM75A3               0.172   hypothetical protein LOC727830 
FAM75A5               0.171   hypothetical protein LOC727905 
FAM75A4               0.170   PREDICTED: family with sequence similarity 75, memb...
FAM75A7               0.169   hypothetical protein LOC26165 
FAM75A4               0.152   PREDICTED: family with sequence similarity 75, memb...
FAM75C1               0.116   family with sequence similarity 75, member C1 [Homo...
FLJ46321              0.058   hypothetical protein LOC389763 
LOC729569             0.048   PREDICTED: hypothetical protein 
FLJ44082              0.047   hypothetical protein LOC389762 
FLJ43859              0.047   hypothetical protein LOC389761 
LOC100289470          0.038   PREDICTED: hypothetical protein XP_002342626 
LOC285679             0.035   hypothetical protein LOC285679 
FAM75B                0.015   hypothetical protein LOC404770 
MLL2                  0.011   myeloid/lymphoid or mixed-lineage leukemia 2 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 2 
WIPF3                 0.010   WAS/WASL interacting protein family, member 3 [Homo...
FMN1                  0.010   formin 1 
AFF1                  0.009   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
ESX1                  0.009   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
SFPQ                  0.009   splicing factor proline/glutamine rich (polypyrimidin...
RERE                  0.009   atrophin-1 like protein isoform b 
RERE                  0.009   atrophin-1 like protein isoform a 
RERE                  0.009   atrophin-1 like protein isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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