CBX2 34042

Name: CBX2	Sequence: fasta or formatted (532aa)		NCBI GI: 61743963
Description: chromobox homolog 2 isoform 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [211aa] chromobox homolog 2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 54 2 C cysteine 1.1 6 1 D aspartate 3.4 18 2 E glutamate 5.6 30 2 F phenylalanine 0.9 5 2 G glycine 8.5 45 2 H histidine 1.9 10 1 I isoleucine 1.9 10 1 K lysine 9.0 48 2 L leucine 7.9 42 3 M methionine 2.1 11 1 N asparagine 2.3 12 1 P proline 9.6 51 3 Q glutamine 3.9 21 1 R arginine 6.2 33 2 S serine 13.0 69 8 T threonine 5.8 31 1 V valine 5.3 28 1 W tryptophan 0.9 5 1 Y tyrosine 0.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromobox homolog 2 isoform 1 CBX2 0.167 chromobox homolog 2 isoform 2 CBX4 0.101 chromobox homolog 4 CBX8 0.096 chromobox homolog 8 CBX6 0.086 chromobox homolog 6 CBX7 0.075 chromobox homolog 7 CBX5 0.046 heterochromatin protein 1-alpha CBX5 0.046 heterochromatin protein 1-alpha CBX5 0.046 heterochromatin protein 1-alpha CBX1 0.041 heterochromatin protein 1-beta CBX1 0.041 heterochromatin protein 1-beta MPHOSPH8 0.039 M-phase phosphoprotein 8 CBX3 0.037 chromobox homolog 3 CBX3 0.037 chromobox homolog 3 SNAPC4 0.034 small nuclear RNA activating complex, polypeptide 4,... FAM133A 0.030 hypothetical protein LOC286499 CDYL 0.029 chromodomain protein, Y chromosome-like isoform a [... TNRC18 0.027 trinucleotide repeat containing 18 NOLC1 0.026 nucleolar and coiled-body phosphoprotein 1 SRRM2 0.026 splicing coactivator subunit SRm300 CDYL2 0.025 chromodomain protein, Y-like 2 FAM133B 0.024 hypothetical protein LOC257415 isoform 2 FAM133B 0.024 hypothetical protein LOC257415 isoform 1 FAM48B1 0.024 hypothetical protein LOC100130302 TAF4 0.023 TBP-associated factor 4 HDGF2 0.023 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.023 hepatoma-derived growth factor-related protein 2 iso... VASP 0.022 vasodilator-stimulated phosphoprotein TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform b ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.