LOC100288541 17599

Name: LOC100288541	Sequence: fasta or formatted (348aa)		NCBI GI: 239743375
Description: PREDICTED: hypothetical protein XP_002342844		Referenced in: Ribosomes
Other entries for this name: alt mRNA [348aa] PREDICTED: similar to ribosomal protein L36a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 38 2 C cysteine 3.7 13 1 D aspartate 2.6 9 1 E glutamate 4.0 14 1 F phenylalanine 4.0 14 2 G glycine 7.2 25 2 H histidine 2.9 10 1 I isoleucine 2.6 9 1 K lysine 4.9 17 2 L leucine 7.8 27 2 M methionine 1.4 5 1 N asparagine 0.9 3 1 P proline 5.5 19 2 Q glutamine 4.3 15 2 R arginine 9.2 32 2 S serine 10.3 36 2 T threonine 6.6 23 2 V valine 9.5 33 2 W tryptophan 0.6 2 1 Y tyrosine 1.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342844 LOC100293166 1.000 PREDICTED: similar to ribosomal protein L36a LOC100290185 1.000 PREDICTED: hypothetical protein XP_002346982 LOC100288541 1.000 PREDICTED: similar to ribosomal protein L36a LOC100293191 0.175 PREDICTED: hypothetical protein LOC100290214 0.175 PREDICTED: hypothetical protein XP_002346983 LOC100288576 0.175 PREDICTED: hypothetical protein XP_002342845 LOC100288576 0.175 PREDICTED: hypothetical protein RPL36A 0.157 ribosomal protein L36a RPL36AL 0.156 ribosomal protein L36a-like protein LOC100290274 0.139 PREDICTED: hypothetical protein XP_002346984 LOC100288645 0.139 PREDICTED: hypothetical protein XP_002342846 LOC100293876 0.102 PREDICTED: similar to ribosomal protein L36a LOC100290073 0.102 PREDICTED: hypothetical protein XP_002346832 LOC100130667 0.051 PREDICTED: hypothetical protein LOC100130667 0.051 PREDICTED: hypothetical protein LOC100130667 0.051 PREDICTED: hypothetical protein LOC100130262 0.028 PREDICTED: hypothetical protein LOC100130262 0.028 PREDICTED: hypothetical protein LOC100130262 0.028 PREDICTED: hypothetical protein LOC100289978 0.024 PREDICTED: hypothetical protein XP_002348035 LOC100130710 0.015 PREDICTED: hypothetical protein LOC100130710 0.015 PREDICTED: hypothetical protein LOC284801 0.012 PREDICTED: hypothetical protein LOC284801 LOC284801 0.012 PREDICTED: hypothetical protein LOC284801 LOC284801 0.012 PREDICTED: hypothetical protein LOC284801 LOC100291846 0.010 PREDICTED: hypothetical protein XP_002345270 LOC100290090 0.010 PREDICTED: hypothetical protein XP_002348037 LOC100288446 0.010 PREDICTED: hypothetical protein XP_002343740 ZNF583 0.009 zinc finger protein 583 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.