Guide to the Human Genome
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Name: ELFN2 Sequence: fasta or formatted (820aa) NCBI GI: 116268101
Description:

leucine rich repeat containing 62

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         66           5
 C cysteine            2.3         19           1
 D aspartate           4.8         39           2
 E glutamate           5.4         44           2
 F phenylalanine       3.2         26           1
 G glycine             7.0         57           5
 H histidine           3.2         26           2
 I isoleucine          4.1         34           2
 K lysine              5.4         44           2
 L leucine            10.9         89           2
 M methionine          1.6         13           1
 N asparagine          4.0         33           2
 P proline             6.3         52           2
 Q glutamine           3.0         25           2
 R arginine            4.9         40           2
 S serine             10.2         84           3
 T threonine           5.4         44           3
 V valine              5.9         48           2
 W tryptophan          0.6          5           1
 Y tyrosine            3.9         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 62 
ELFN1                 0.412   extracellular leucine-rich repeat and fibronectin t...
SLIT3                 0.044   slit homolog 3 
SLIT1                 0.044   slit homolog 1 
SLITRK3               0.042   slit and trk like 3 protein 
LRIG3                 0.040   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.040   leucine-rich repeats and immunoglobulin-like domain...
ISLR2                 0.039   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.039   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.039   immunoglobulin superfamily containing leucine-rich r...
ISLR2                 0.039   immunoglobulin superfamily containing leucine-rich ...
LRTM2                 0.039   leucine-rich repeats and transmembrane domains 2 [Ho...
LRIG2                 0.038   leucine-rich repeats and immunoglobulin-like domains ...
SLIT2                 0.038   slit homolog 2 
LRRC24                0.037   leucine rich repeat containing 24 
LRRC38                0.037   PREDICTED: leucine rich repeat containing 38, parti...
LRRC38                0.037   PREDICTED: leucine rich repeat containing 38 
LRRC38                0.037   PREDICTED: leucine rich repeat containing 38 
ISLR                  0.037   immunoglobulin superfamily containing leucine-rich r...
ISLR                  0.037   immunoglobulin superfamily containing leucine-rich re...
GP5                   0.037   glycoprotein V (platelet) 
MXRA5                 0.037   adlican 
SLITRK6               0.036   slit and trk like 6 
LRRC4                 0.034   leucine rich repeat containing 4 
SLITRK4               0.034   slit and trk like 4 protein 
LRRC19                0.034   leucine rich repeat containing 19 
LRTM1                 0.034   leucine-rich repeats and transmembrane domains 1 [Ho...
PXDNL                 0.034   peroxidasin homolog-like 
PXDN                  0.034   peroxidasin 
LRRC15                0.033   leucine rich repeat containing 15 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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