Guide to the Human Genome
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Name: STK11IP Sequence: fasta or formatted (1099aa) NCBI GI: 116235474
Description:

LKB1 interacting protein

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         84           2
 C cysteine            2.3         25           2
 D aspartate           3.7         41           1
 E glutamate           9.5        104           6
 F phenylalanine       3.2         35           2
 G glycine             6.6         73           2
 H histidine           2.9         32           2
 I isoleucine          1.4         15           1
 K lysine              2.0         22           1
 L leucine            16.1        177           3
 M methionine          1.0         11           1
 N asparagine          1.6         18           1
 P proline             9.0         99           3
 Q glutamine           4.8         53           2
 R arginine            7.3         80           2
 S serine              8.7         96           2
 T threonine           3.8         42           2
 V valine              5.6         62           3
 W tryptophan          1.5         17           1
 Y tyrosine            1.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   LKB1 interacting protein 
NISCH                 0.038   nischarin 
LRGUK                 0.017   leucine-rich repeats and guanylate kinase domain con...
LRRC40                0.016   leucine rich repeat containing 40 
SHOC2                 0.015   soc-2 suppressor of clear homolog 
MYT1                  0.015   myelin transcription factor 1 
PELP1                 0.015   proline, glutamic acid and leucine rich protein 1 [...
C12orf12              0.014   hypothetical protein LOC196477 
CHADL                 0.014   chondroadherin-like 
RPGR                  0.013   retinitis pigmentosa GTPase regulator isoform C [Hom...
MFHAS1                0.013   malignant fibrous histiocytoma amplified sequence 1...
LRRC69                0.013   leucine rich repeat containing 69 
LRDD                  0.013   leucine rich repeat and death domain containing prot...
LRDD                  0.013   leucine rich repeat and death domain containing prot...
MEX3C                 0.013   ring finger and KH domain containing 2 
SHROOM4               0.012   shroom family member 4 
DAXX                  0.012   death-domain associated protein isoform a 
DAXX                  0.012   death-domain associated protein isoform a 
DAXX                  0.012   death-domain associated protein isoform b 
LOC100294088          0.012   PREDICTED: hypothetical protein, partial 
CEP110                0.012   centrosomal protein 110kDa 
MAP7                  0.012   microtubule-associated protein 7 
LOC728792             0.012   PREDICTED: hypothetical protein 
LRDD                  0.012   leucine rich repeat and death domain containing prot...
ZFHX3                 0.012   AT-binding transcription factor 1 
MAP7D1                0.012   MAP7 domain containing 1 
KIAA0644              0.012   hypothetical protein LOC9865 
LOC100289089          0.011   PREDICTED: hypothetical protein XP_002343359 
RYR1                  0.011   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.011   skeletal muscle ryanodine receptor isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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