LRRC40 13007

Name: LRRC40	Sequence: fasta or formatted (602aa)		NCBI GI: 21361633
Description: leucine rich repeat containing 40		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.8 23 2 C cysteine 1.5 9 1 D aspartate 5.0 30 2 E glutamate 7.6 46 2 F phenylalanine 2.8 17 1 G glycine 3.3 20 2 H histidine 1.7 10 1 I isoleucine 6.3 38 2 K lysine 5.8 35 1 L leucine 18.4 111 3 M methionine 2.2 13 2 N asparagine 8.0 48 2 P proline 4.5 27 2 Q glutamine 3.7 22 1 R arginine 5.8 35 2 S serine 8.8 53 2 T threonine 4.8 29 2 V valine 4.3 26 1 W tryptophan 0.5 3 2 Y tyrosine 1.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 40 LOC401387 0.138 leucine-rich repeat and death domain-containing pro... SHOC2 0.135 soc-2 suppressor of clear homolog LRRIQ4 0.111 leucine-rich repeats and IQ motif containing 4 [Hom... LRRC1 0.108 leucine rich repeat containing 1 ERBB2IP 0.108 ERBB2 interacting protein isoform 7 ERBB2IP 0.108 ERBB2 interacting protein isoform 2 MFHAS1 0.100 malignant fibrous histiocytoma amplified sequence 1... LRRC7 0.100 leucine rich repeat containing 7 SCRIB 0.099 scribble isoform b SCRIB 0.099 scribble isoform a PHLPP2 0.093 PH domain and leucine rich repeat protein phosphatas... PHLPP1 0.090 PH domain and leucine rich repeat protein phosphatas... FLII 0.080 flightless I homolog IGFALS 0.076 insulin-like growth factor binding protein, acid la... IGFALS 0.076 insulin-like growth factor binding protein, acid labi... LRRC69 0.076 leucine rich repeat containing 69 LGR5 0.073 leucine-rich repeat-containing G protein-coupled rece... LRDD 0.072 leucine rich repeat and death domain containing prot... LRDD 0.072 leucine rich repeat and death domain containing prot... RSU1 0.072 ras suppressor protein 1 isoform 1 LRRC30 0.072 leucine rich repeat containing 30 LRRC39 0.071 leucine rich repeat containing 39 LRRK1 0.070 leucine-rich repeat kinase 1 LGR4 0.068 leucine-rich repeat-containing G protein-coupled re... LRRC8A 0.067 leucine rich repeat containing 8 family, member A [H... LRRC8A 0.067 leucine rich repeat containing 8 family, member A [... LRRC8A 0.067 leucine rich repeat containing 8 family, member A [... LGR6 0.067 leucine-rich repeat-containing G protein-coupled rec... LRRC8B 0.066 leucine rich repeat containing 8 family, member B [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.