Guide to the Human Genome
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Name: MFHAS1 Sequence: fasta or formatted (1052aa) NCBI GI: 110825984
Description:

malignant fibrous histiocytoma amplified sequence 1

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         88           2
 C cysteine            1.8         19           1
 D aspartate           3.4         36           1
 E glutamate           6.6         69           2
 F phenylalanine       2.9         31           2
 G glycine             6.4         67           3
 H histidine           3.8         40           2
 I isoleucine          3.1         33           2
 K lysine              3.7         39           2
 L leucine            17.2        181           3
 M methionine          0.8          8           1
 N asparagine          3.9         41           2
 P proline             6.9         73           3
 Q glutamine           4.6         48           2
 R arginine            6.6         69           3
 S serine              6.8         72           2
 T threonine           3.1         33           2
 V valine              6.3         66           3
 W tryptophan          1.3         14           2
 Y tyrosine            2.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   malignant fibrous histiocytoma amplified sequence 1... 
LRRIQ4                0.068   leucine-rich repeats and IQ motif containing 4 [Hom...
LOC401387             0.062   leucine-rich repeat and death domain-containing pro...
LRRC1                 0.060   leucine rich repeat containing 1 
ERBB2IP               0.060   ERBB2 interacting protein isoform 7 
ERBB2IP               0.060   ERBB2 interacting protein isoform 2 
SCRIB                 0.058   scribble isoform b 
SCRIB                 0.058   scribble isoform a 
SHOC2                 0.057   soc-2 suppressor of clear homolog 
IGFALS                0.055   insulin-like growth factor binding protein, acid la...
IGFALS                0.055   insulin-like growth factor binding protein, acid labi...
LRRC40                0.055   leucine rich repeat containing 40 
LRRC7                 0.054   leucine rich repeat containing 7 
FLII                  0.051   flightless I homolog 
LRRK2                 0.049   leucine-rich repeat kinase 2 
LRRK1                 0.048   leucine-rich repeat kinase 1 
LRRC30                0.046   leucine rich repeat containing 30 
LRRC58                0.045   leucine rich repeat containing 58 
GP5                   0.043   glycoprotein V (platelet) 
LOC390205             0.042   leucine rich repeat containing 10-like 
LRRC15                0.042   leucine rich repeat containing 15 isoform a 
LRRC15                0.042   leucine rich repeat containing 15 isoform b 
CPN2                  0.040   carboxypeptidase N, polypeptide 2, 83kD 
RSU1                  0.039   ras suppressor protein 1 isoform 1 
LRRC8E                0.039   leucine rich repeat containing 8 family, member E [H...
LRCH4                 0.039   leucine-rich repeats and calponin homology (CH) doma...
LRRC39                0.039   leucine rich repeat containing 39 
LRRC8D                0.037   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.037   leucine rich repeat containing 8 family, member D [H...
LRDD                  0.037   leucine rich repeat and death domain containing prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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