SHOC2 27664

Name: SHOC2	Sequence: fasta or formatted (582aa)		NCBI GI: 41281398
Description: soc-2 suppressor of clear homolog		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 23 2 C cysteine 1.4 8 1 D aspartate 3.8 22 1 E glutamate 7.7 45 2 F phenylalanine 1.9 11 1 G glycine 4.8 28 2 H histidine 2.1 12 1 I isoleucine 5.3 31 2 K lysine 8.4 49 2 L leucine 18.2 106 2 M methionine 1.9 11 1 N asparagine 8.1 47 3 P proline 5.5 32 2 Q glutamine 2.7 16 1 R arginine 4.1 24 1 S serine 9.6 56 3 T threonine 5.2 30 2 V valine 3.4 20 2 W tryptophan 0.2 1 1 Y tyrosine 1.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 soc-2 suppressor of clear homolog LOC401387 0.174 leucine-rich repeat and death domain-containing pro... LRRC1 0.155 leucine rich repeat containing 1 LRRC7 0.152 leucine rich repeat containing 7 LRRIQ4 0.151 leucine-rich repeats and IQ motif containing 4 [Hom... SCRIB 0.151 scribble isoform b SCRIB 0.151 scribble isoform a ERBB2IP 0.143 ERBB2 interacting protein isoform 7 ERBB2IP 0.143 ERBB2 interacting protein isoform 2 LRRC40 0.139 leucine rich repeat containing 40 FLII 0.116 flightless I homolog PHLPP2 0.115 PH domain and leucine rich repeat protein phosphatas... PHLPP1 0.108 PH domain and leucine rich repeat protein phosphatas... MFHAS1 0.106 malignant fibrous histiocytoma amplified sequence 1... LRRC8A 0.094 leucine rich repeat containing 8 family, member A [H... LRRC8A 0.094 leucine rich repeat containing 8 family, member A [... LRRC8A 0.094 leucine rich repeat containing 8 family, member A [... LRRC15 0.092 leucine rich repeat containing 15 isoform a LRRC15 0.092 leucine rich repeat containing 15 isoform b LGR4 0.090 leucine-rich repeat-containing G protein-coupled re... IGFALS 0.090 insulin-like growth factor binding protein, acid la... IGFALS 0.090 insulin-like growth factor binding protein, acid labi... LRRC8C 0.085 leucine rich repeat containing 8 family, member C [H... LRRC8E 0.085 leucine rich repeat containing 8 family, member E [H... LRRC8D 0.085 leucine rich repeat containing 8 family, member D [... LRRC8D 0.085 leucine rich repeat containing 8 family, member D [H... LGR5 0.084 leucine-rich repeat-containing G protein-coupled rece... CPN2 0.084 carboxypeptidase N, polypeptide 2, 83kD LRRC39 0.082 leucine rich repeat containing 39 LGR6 0.081 leucine-rich repeat-containing G protein-coupled rec... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.