Guide to the Human Genome
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Name: TANC2 Sequence: fasta or formatted (1990aa) NCBI GI: 157739945
Description:

tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2

Referenced in:

Ankyrin Family
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        141           4
 C cysteine            1.3         26           1
 D aspartate           4.1         82           2
 E glutamate           5.8        116           3
 F phenylalanine       2.7         54           1
 G glycine             6.2        123           2
 H histidine           2.7         54           2
 I isoleucine          4.3         85           2
 K lysine              4.2         83           2
 L leucine             9.9        197           3
 M methionine          2.3         46           2
 N asparagine          3.3         65           2
 P proline             7.4        148           5
 Q glutamine           6.3        126           3
 R arginine            6.2        123           3
 S serine             11.5        228           4
 T threonine           5.0         99           2
 V valine              5.8        116           3
 W tryptophan          0.7         14           1
 Y tyrosine            3.2         64           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat, ankyrin repeat and coiled... 
TANC1                 0.430   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.409   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD50               0.077   ankyrin repeat domain 50 
ANKRD17               0.037   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.037   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.035   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.035   ANKHD1-EIF4EBP3 protein 
ANK2                  0.034   ankyrin 2 isoform 3 
ANK2                  0.034   ankyrin 2 isoform 2 
ANK2                  0.034   ankyrin 2 isoform 1 
ANK3                  0.032   ankyrin 3 isoform 1 
ANKHD1                0.031   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.031   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANK1                  0.031   ankyrin 1 isoform 9 
ANK1                  0.031   ankyrin 1 isoform 1 
ANK1                  0.031   ankyrin 1 isoform 3 
ANK1                  0.031   ankyrin 1 isoform 2 
ANK1                  0.031   ankyrin 1 isoform 4 
ANKRD28               0.030   ankyrin repeat domain 28 
KIDINS220             0.029   kinase D-interacting substrate of 220 kDa 
DAPK1                 0.028   death-associated protein kinase 1 
ANKRD44               0.028   ankyrin repeat domain 44 
LOC441869             0.027   hypothetical protein LOC441869 
ANKRD52               0.025   ankyrin repeat domain 52 
TNKS2                 0.025   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
INVS                  0.024   inversin isoform a 
INVS                  0.024   inversin isoform b 
ANKK1                 0.023   ankyrin repeat and kinase domain containing 1 
RIPK4                 0.023   ankyrin repeat domain 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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