SMCHD1 4758

Name: SMCHD1	Sequence: fasta or formatted (2005aa)		NCBI GI: 148839305
Description: structural maintenance of chromosomes flexible hinge domain containing 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 97 3 C cysteine 1.5 30 1 D aspartate 6.4 129 2 E glutamate 6.8 136 2 F phenylalanine 4.1 82 2 G glycine 6.2 124 3 H histidine 2.2 45 2 I isoleucine 7.1 142 3 K lysine 8.2 165 3 L leucine 9.3 186 3 M methionine 1.8 37 2 N asparagine 4.3 87 2 P proline 5.9 119 2 Q glutamine 4.5 91 3 R arginine 4.8 96 2 S serine 6.2 124 3 T threonine 5.3 107 3 V valine 6.7 134 2 W tryptophan 0.9 18 1 Y tyrosine 2.8 56 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 structural maintenance of chromosomes flexible hing... TOM1L1 0.003 target of myb1-like 1 ITSN1 0.003 intersectin 1 isoform ITSN-s ITSN1 0.003 intersectin 1 isoform ITSN-l PGA5 0.002 pepsinogen 5, group I PGA4 0.002 pepsinogen 4, group I PGA3 0.002 pepsinogen 3, group I SDCCAG1 0.002 serologically defined colon cancer antigen 1 FARSB 0.002 phenylalanyl-tRNA synthetase, beta subunit CCDC21 0.002 coiled-coil domain containing 21 RPRD1B 0.002 Regulation of nuclear pre-mRNA domain containing 1B ... LOC100289777 0.002 PREDICTED: hypothetical protein XP_002348316 MYH14 0.002 myosin, heavy chain 14 isoform 1 MYH14 0.002 myosin, heavy chain 14 isoform 2 MYH14 0.002 myosin, heavy chain 14 isoform 3 SMC2 0.002 structural maintenance of chromosomes 2 SMC2 0.002 structural maintenance of chromosomes 2 SMC2 0.002 structural maintenance of chromosomes 2 C10orf118 0.002 CTCL tumor antigen L14-2 HDAC9 0.002 histone deacetylase 9 isoform 5 KIN 0.002 HsKin17 protein CCDC99 0.002 coiled-coil domain containing 99 NAP5 0.002 Nck-associated protein 5 isoform 1 NLRP7 0.002 NACHT, leucine rich repeat and PYD containing 7 iso... NLRP7 0.002 NACHT, leucine rich repeat and PYD containing 7 isof... NLRP7 0.002 NACHT, leucine rich repeat and PYD containing 7 isof... MLLT3 0.002 myeloid/lymphoid or mixed-lineage leukemia (trithor... TXLNA 0.002 taxilin CENPE 0.002 centromere protein E KIAA0892 0.002 hypothetical protein LOC23383 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.