SCEL 16219

Name: SCEL	Sequence: fasta or formatted (646aa)		NCBI GI: 238908501
Description: sciellin isoform 3		Referenced in: LIM Domain Proteins Skin and Related Tissues
Other entries for this name: alt prot [668aa] sciellin isoform 2 alt prot [688aa] sciellin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.7 24 2 C cysteine 1.4 9 2 D aspartate 6.3 41 2 E glutamate 6.3 41 3 F phenylalanine 1.1 7 1 G glycine 4.6 30 2 H histidine 1.5 10 1 I isoleucine 5.4 35 1 K lysine 9.1 59 3 L leucine 7.0 45 1 M methionine 1.7 11 1 N asparagine 9.9 64 2 P proline 5.1 33 2 Q glutamine 5.4 35 2 R arginine 6.7 43 2 S serine 9.1 59 2 T threonine 7.1 46 2 V valine 5.7 37 2 W tryptophan 0.5 3 1 Y tyrosine 2.2 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sciellin isoform 3 SCEL 0.980 sciellin isoform 1 SCEL 0.940 sciellin isoform 2 ZNF185 0.035 zinc finger protein 185 LMO7 0.026 LIM domain only 7 isoform 1 LIMCH1 0.024 LIM and calponin homology domains 1 isoform a [Homo... LIMCH1 0.024 LIM and calponin homology domains 1 isoform e [Homo... LIMCH1 0.024 LIM and calponin homology domains 1 isoform d [Homo... LIMCH1 0.024 LIM and calponin homology domains 1 isoform c [Homo... LIMCH1 0.024 LIM and calponin homology domains 1 isoform b [Homo... RBBP6 0.015 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.015 retinoblastoma-binding protein 6 isoform 1 TMCO5A 0.013 transmembrane and coiled-coil domains 5A LOC100292655 0.013 PREDICTED: similar to armadillo repeat containing, ... PPIG 0.011 peptidylprolyl isomerase G AHCTF1 0.011 transcription factor ELYS SYCP2 0.011 synaptonemal complex protein 2 BUD13 0.011 BUD13 homolog isoform 1 ARID4A 0.011 retinoblastoma-binding protein 1 isoform III ARID4A 0.011 retinoblastoma-binding protein 1 isoform II ARID4A 0.011 retinoblastoma-binding protein 1 isoform I FHL1 0.010 four and a half LIM domains 1 isoform 4 FHL1 0.010 four and a half LIM domains 1 isoform 2 FHL1 0.010 four and a half LIM domains 1 isoform 1 FHL1 0.010 four and a half LIM domains 1 isoform 2 FHL1 0.010 four and a half LIM domains 1 isoform 3 FHL1 0.010 four and a half LIM domains 1 isoform 5 FHL1 0.010 four and a half LIM domains 1 isoform 2 ERBB2IP 0.010 ERBB2 interacting protein isoform 7 ERBB2IP 0.010 ERBB2 interacting protein isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.