SCEL 16217

Name: SCEL	Sequence: fasta or formatted (668aa)		NCBI GI: 238908497
Description: sciellin isoform 2		Referenced in: LIM Domain Proteins Skin and Related Tissues
Other entries for this name: alt prot [688aa] sciellin isoform 1 alt prot [646aa] sciellin isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 24 2 C cysteine 1.3 9 2 D aspartate 6.1 41 2 E glutamate 6.3 42 3 F phenylalanine 1.2 8 1 G glycine 4.8 32 2 H histidine 1.5 10 1 I isoleucine 5.4 36 1 K lysine 9.1 61 3 L leucine 6.7 45 1 M methionine 1.6 11 1 N asparagine 9.9 66 2 P proline 5.8 39 5 Q glutamine 5.1 34 2 R arginine 6.7 45 3 S serine 9.1 61 3 T threonine 7.3 49 2 V valine 5.4 36 2 W tryptophan 0.6 4 1 Y tyrosine 2.2 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sciellin isoform 2 SCEL 0.989 sciellin isoform 1 SCEL 0.900 sciellin isoform 3 ZNF185 0.034 zinc finger protein 185 LMO7 0.025 LIM domain only 7 isoform 1 LIMCH1 0.023 LIM and calponin homology domains 1 isoform a [Homo... LIMCH1 0.023 LIM and calponin homology domains 1 isoform e [Homo... LIMCH1 0.023 LIM and calponin homology domains 1 isoform d [Homo... LIMCH1 0.023 LIM and calponin homology domains 1 isoform c [Homo... LIMCH1 0.023 LIM and calponin homology domains 1 isoform b [Homo... ARID4A 0.014 retinoblastoma-binding protein 1 isoform III ARID4A 0.014 retinoblastoma-binding protein 1 isoform II ARID4A 0.014 retinoblastoma-binding protein 1 isoform I TBC1D2 0.012 TBC1 domain family, member 2 LOC100292655 0.012 PREDICTED: similar to armadillo repeat containing, ... ERBB2IP 0.012 ERBB2 interacting protein isoform 7 ERBB2IP 0.012 ERBB2 interacting protein isoform 2 CENPE 0.011 centromere protein E NIPBL 0.011 delangin isoform B NIPBL 0.011 delangin isoform A YTHDC1 0.011 splicing factor YT521-B isoform 1 FHL1 0.010 four and a half LIM domains 1 isoform 4 FHL1 0.010 four and a half LIM domains 1 isoform 2 FHL1 0.010 four and a half LIM domains 1 isoform 1 FHL1 0.010 four and a half LIM domains 1 isoform 2 RXRB 0.010 retinoid X receptor, beta WASL 0.010 Wiskott-Aldrich syndrome gene-like protein FHL1 0.010 four and a half LIM domains 1 isoform 3 FHL1 0.010 four and a half LIM domains 1 isoform 5 FHL1 0.010 four and a half LIM domains 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.