SCEL 16218

Name: SCEL	Sequence: fasta or formatted (688aa)		NCBI GI: 238908499
Description: sciellin isoform 1		Referenced in: LIM Domain Proteins Skin and Related Tissues
Other entries for this name: alt prot [668aa] sciellin isoform 2 alt prot [646aa] sciellin isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 25 2 C cysteine 1.3 9 2 D aspartate 6.4 44 2 E glutamate 6.1 42 3 F phenylalanine 1.2 8 1 G glycine 4.8 33 2 H histidine 1.5 10 1 I isoleucine 5.4 37 1 K lysine 9.2 63 3 L leucine 6.8 47 1 M methionine 1.6 11 1 N asparagine 9.7 67 2 P proline 5.7 39 5 Q glutamine 5.2 36 2 R arginine 6.8 47 3 S serine 9.2 63 3 T threonine 7.3 50 2 V valine 5.5 38 2 W tryptophan 0.6 4 1 Y tyrosine 2.2 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sciellin isoform 1 SCEL 0.962 sciellin isoform 2 SCEL 0.912 sciellin isoform 3 ZNF185 0.033 zinc finger protein 185 LMO7 0.024 LIM domain only 7 isoform 1 LIMCH1 0.023 LIM and calponin homology domains 1 isoform a [Homo... LIMCH1 0.022 LIM and calponin homology domains 1 isoform e [Homo... LIMCH1 0.022 LIM and calponin homology domains 1 isoform d [Homo... LIMCH1 0.022 LIM and calponin homology domains 1 isoform c [Homo... LIMCH1 0.022 LIM and calponin homology domains 1 isoform b [Homo... BUD13 0.015 BUD13 homolog isoform 1 RBBP6 0.015 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.015 retinoblastoma-binding protein 6 isoform 1 CENPE 0.012 centromere protein E C6orf10 0.012 chromosome 6 open reading frame 10 TACC2 0.012 transforming, acidic coiled-coil containing protein ... TACC2 0.012 transforming, acidic coiled-coil containing protein ... ARID4A 0.012 retinoblastoma-binding protein 1 isoform III ARID4A 0.012 retinoblastoma-binding protein 1 isoform II ARID4A 0.012 retinoblastoma-binding protein 1 isoform I ERBB2IP 0.011 ERBB2 interacting protein isoform 7 ERBB2IP 0.011 ERBB2 interacting protein isoform 2 ACIN1 0.011 apoptotic chromatin condensation inducer 1 LOC100292655 0.011 PREDICTED: similar to armadillo repeat containing, ... CEP110 0.011 centrosomal protein 110kDa RAI14 0.010 retinoic acid induced 14 isoform d RAI14 0.010 retinoic acid induced 14 isoform c RAI14 0.010 retinoic acid induced 14 isoform a RAI14 0.010 retinoic acid induced 14 isoform a RAI14 0.010 retinoic acid induced 14 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.