SYCP2 26969

Name: SYCP2	Sequence: fasta or formatted (1530aa)		NCBI GI: 38373673
Description: synaptonemal complex protein 2		Referenced in: Spindle, M phase, and Meiosis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.5 54 2 C cysteine 2.0 30 1 D aspartate 5.7 87 2 E glutamate 8.4 129 3 F phenylalanine 3.4 52 2 G glycine 2.9 44 2 H histidine 2.2 34 2 I isoleucine 6.8 104 3 K lysine 11.6 177 2 L leucine 7.8 120 3 M methionine 2.2 34 1 N asparagine 6.1 94 2 P proline 3.5 53 2 Q glutamine 4.8 73 3 R arginine 4.8 74 4 S serine 11.2 171 4 T threonine 5.4 82 2 V valine 5.0 76 2 W tryptophan 1.0 15 1 Y tyrosine 1.8 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptonemal complex protein 2 SYCP2L 0.084 synaptonemal complex protein 2-like BOD1L 0.012 biorientation of chromosomes in cell division 1-like... CENPE 0.012 centromere protein E MAP1B 0.011 microtubule-associated protein 1B LOC400986 0.009 PREDICTED: protein immuno-reactive with anti-PTH po... RBBP6 0.009 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.009 retinoblastoma-binding protein 6 isoform 1 CYLC1 0.008 cylicin, basic protein of sperm head cytoskeleton 1... ATRX 0.008 transcriptional regulator ATRX isoform 2 ATRX 0.008 transcriptional regulator ATRX isoform 1 PPIG 0.008 peptidylprolyl isomerase G SYCP3 0.008 synaptonemal complex protein 3 UACA 0.008 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.008 uveal autoantigen with coiled-coil domains and ankyr... NKTR 0.007 natural killer-tumor recognition sequence BRCA1 0.007 breast cancer 1, early onset isoform 2 BRCA1 0.007 breast cancer 1, early onset isoform 3 BRCA1 0.007 breast cancer 1, early onset isoform 1 SGOL2 0.007 shugoshin-like 2 isoform 2 SGOL2 0.007 shugoshin-like 2 isoform 1 SGOL2 0.007 shugoshin-like 2 isoform 3 KTN1 0.007 kinectin 1 isoform c GOLGA4 0.007 golgi autoantigen, golgin subfamily a, 4 ZC3H13 0.007 zinc finger CCCH-type containing 13 GOLGB1 0.006 golgi autoantigen, golgin subfamily b, macrogolgin ... LRRIQ1 0.006 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.006 leucine-rich repeats and IQ motif containing 1 isof... TRDN 0.006 triadin ANKRD36B 0.006 ankyrin repeat domain 36B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.