Guide to the Human Genome
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Name: CENPE Sequence: fasta or formatted (2701aa) NCBI GI: 71061468
Description:

centromere protein E

Referenced in:

Centromere Proteins
Kinesins
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7        101           2
 C cysteine            0.9         24           2
 D aspartate           4.8        129           2
 E glutamate          14.7        396           3
 F phenylalanine       2.0         53           2
 G glycine             2.0         53           3
 H histidine           2.2         60           1
 I isoleucine          6.1        166           2
 K lysine             11.8        320           3
 L leucine            11.5        310           2
 M methionine          2.6         71           2
 N asparagine          5.4        147           2
 P proline             1.4         39           1
 Q glutamine           7.7        208           3
 R arginine            4.6        124           2
 S serine              6.6        177           3
 T threonine           5.9        159           2
 V valine              4.3        117           2
 W tryptophan          0.3          8           1
 Y tyrosine            1.4         39           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centromere protein E 
KIF15                 0.062   kinesin family member 15 
KIF4A                 0.059   kinesin family member 4 
KIF4B                 0.057   kinesin family member 4B 
GOLGA4                0.055   golgi autoantigen, golgin subfamily a, 4 
KIF5B                 0.052   kinesin family member 5B 
KIF5C                 0.052   kinesin family member 5C 
KIF16B                0.052   kinesin-like motor protein C20orf23 
KIF3B                 0.051   kinesin family member 3B 
KIF3A                 0.051   kinesin family member 3A 
KIF27                 0.051   kinesin family member 27 
KIF5A                 0.049   kinesin family member 5A 
GOLGB1                0.049   golgi autoantigen, golgin subfamily b, macrogolgin ...
CENPF                 0.047   centromere protein F 
CEP290                0.047   centrosomal protein 290kDa 
KIF17                 0.047   kinesin family member 17 isoform b 
KIF17                 0.047   kinesin family member 17 isoform a 
CEP250                0.046   centrosomal protein 2 
KIF11                 0.045   kinesin family member 11 
KIF20B                0.043   M-phase phosphoprotein 1 
GCC2                  0.043   GRIP and coiled-coil domain-containing 2 
KIF13B                0.043   kinesin family member 13B 
EEA1                  0.042   early endosome antigen 1, 162kD 
KIF21A                0.042   kinesin family member 21A 
KIF3C                 0.042   kinesin family member 3C 
KIF13A                0.042   kinesin family member 13A isoform d 
KIF13A                0.042   kinesin family member 13A isoform c 
KIF13A                0.042   kinesin family member 13A isoform b 
KIF13A                0.042   kinesin family member 13A isoform a 
KIF14                 0.041   kinesin family member 14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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