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Search of human proteins with 237820624
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|237820624 pleckstrin homology domain containing, family N
member 1 isoform b [Homo sapiens]
(576 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237820624 pleckstrin homology domain containing, family N mem... 1188 0.0
gi|237820622 pleckstrin homology domain containing, family N mem... 1129 0.0
gi|166064038 PAK-interacting exchange factor beta isoform a [Hom... 68 3e-11
gi|166064036 PAK-interacting exchange factor beta isoform d [Hom... 68 3e-11
gi|166064034 PAK-interacting exchange factor beta isoform c [Hom... 68 3e-11
gi|22027528 PAK-interacting exchange factor beta isoform b [Homo... 68 3e-11
gi|4505573 PAK-interacting exchange factor beta isoform a [Homo ... 68 3e-11
gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo... 50 7e-06
gi|169168458 PREDICTED: hypothetical protein [Homo sapiens] 48 3e-05
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 46 8e-05
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 44 3e-04
gi|28559039 mediator complex subunit 1 [Homo sapiens] 44 4e-04
gi|157311635 FAM83H [Homo sapiens] 42 0.001
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 42 0.001
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 42 0.002
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 42 0.002
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 42 0.002
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 42 0.002
gi|221139926 NHS-like 1 [Homo sapiens] 41 0.003
gi|41281612 zinc finger protein 828 [Homo sapiens] 41 0.003
gi|151301154 mucin 6, gastric [Homo sapiens] 41 0.003
gi|23510413 sorting nexin 26 [Homo sapiens] 41 0.003
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 41 0.003
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 41 0.003
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 40 0.004
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 40 0.006
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 40 0.008
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 40 0.008
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 40 0.008
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 40 0.008
>gi|237820624 pleckstrin homology domain containing, family N member
1 isoform b [Homo sapiens]
Length = 576
Score = 1188 bits (3073), Expect = 0.0
Identities = 576/576 (100%), Positives = 576/576 (100%)
Query: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG
Sbjct: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
Query: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF
Sbjct: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
Query: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR
Sbjct: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
Query: 181 WLYHLEKQTALLGGPRRCHSAPPQGSCGDELPWTLQRRLTRLRTASGHEPGGSAVCASRV 240
WLYHLEKQTALLGGPRRCHSAPPQGSCGDELPWTLQRRLTRLRTASGHEPGGSAVCASRV
Sbjct: 181 WLYHLEKQTALLGGPRRCHSAPPQGSCGDELPWTLQRRLTRLRTASGHEPGGSAVCASRV 240
Query: 241 KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE 300
KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE
Sbjct: 241 KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE 300
Query: 301 GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ 360
GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ
Sbjct: 301 GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ 360
Query: 361 TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPL 420
TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPL
Sbjct: 361 TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPL 420
Query: 421 YADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPA 480
YADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPA
Sbjct: 421 YADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPA 480
Query: 481 GPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRS 540
GPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRS
Sbjct: 481 GPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRS 540
Query: 541 RDPGYDHLWDETLSSSHQKCPQLGGPEASGGLVQWI 576
RDPGYDHLWDETLSSSHQKCPQLGGPEASGGLVQWI
Sbjct: 541 RDPGYDHLWDETLSSSHQKCPQLGGPEASGGLVQWI 576
>gi|237820622 pleckstrin homology domain containing, family N member
1 isoform a [Homo sapiens]
Length = 611
Score = 1129 bits (2920), Expect = 0.0
Identities = 564/623 (90%), Positives = 564/623 (90%), Gaps = 59/623 (9%)
Query: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG
Sbjct: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
Query: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF
Sbjct: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
Query: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR
Sbjct: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
Query: 181 WLYHLEKQTALLGGPRRCHSAPPQGSCGDELPWTLQRRLTRLRTASGHEPGGSAVCASRV 240
WLYHLEKQTALLGGPRRCHSAPP QRRLTRLRTASGHEPGGSAVCASRV
Sbjct: 181 WLYHLEKQTALLGGPRRCHSAPP------------QRRLTRLRTASGHEPGGSAVCASRV 228
Query: 241 KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE 300
KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE
Sbjct: 229 KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE 288
Query: 301 GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ 360
GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ
Sbjct: 289 GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ 348
Query: 361 TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTP------------------------ 396
TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTP
Sbjct: 349 TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSR 408
Query: 397 -----------------------LHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR 433
LHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR
Sbjct: 409 SPGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR 468
Query: 434 RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS 493
RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS
Sbjct: 469 RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS 528
Query: 494 RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETL 553
RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETL
Sbjct: 529 RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETL 588
Query: 554 SSSHQKCPQLGGPEASGGLVQWI 576
SSSHQKCPQLGGPEASGGLVQWI
Sbjct: 589 SSSHQKCPQLGGPEASGGLVQWI 611
>gi|166064038 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 275 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 334
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 335 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 394
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 395 LQKQTKVTSVGNPTIKPHSVP 415
Score = 49.7 bits (117), Expect = 7e-06
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 232 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 288
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 300 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 359
Query: 289 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVM 348
+ E +F I G +I I V C + +D W+ L+ T +V
Sbjct: 360 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT-----------------KVT 402
Query: 349 GSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV-PSTVGCSSQHTPLHRLSLESSPD 407
G ++ P + SH+LP V PS+ S+ PL + + P
Sbjct: 403 SVGNPTIK--------------PHSVPSHTLPSHPVTPSSKHADSKPAPL-TPAYHTLPH 447
Query: 408 APDHTSETSHSPLYADPYTPPAT 430
H T H+ + P PP T
Sbjct: 448 PSHH--GTPHTTINWGPLEPPKT 468
>gi|166064036 PAK-interacting exchange factor beta isoform d [Homo
sapiens]
Length = 753
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 403 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 462
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 463 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 522
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 523 LQKQTKVTSVGNPTIKPHSVP 543
Score = 49.7 bits (117), Expect = 7e-06
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 232 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 288
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 428 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 487
Query: 289 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVM 348
+ E +F I G +I I V C + +D W+ L+ T +V
Sbjct: 488 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT-----------------KVT 530
Query: 349 GSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV-PSTVGCSSQHTPLHRLSLESSPD 407
G ++ P + SH+LP V PS+ S+ PL + + P
Sbjct: 531 SVGNPTIK--------------PHSVPSHTLPSHPVTPSSKHADSKPAPL-TPAYHTLPH 575
Query: 408 APDHTSETSHSPLYADPYTPPAT 430
H T H+ + P PP T
Sbjct: 576 PSHH--GTPHTTINWGPLEPPKT 596
>gi|166064034 PAK-interacting exchange factor beta isoform c [Homo
sapiens]
Length = 803
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 453 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 512
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 513 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 572
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 573 LQKQTKVTSVGNPTIKPHSVP 593
Score = 49.7 bits (117), Expect = 7e-06
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 232 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 288
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 478 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 537
Query: 289 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVM 348
+ E +F I G +I I V C + +D W+ L+ T +V
Sbjct: 538 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT-----------------KVT 580
Query: 349 GSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV-PSTVGCSSQHTPLHRLSLESSPD 407
G ++ P + SH+LP V PS+ S+ PL + + P
Sbjct: 581 SVGNPTIK--------------PHSVPSHTLPSHPVTPSSKHADSKPAPL-TPAYHTLPH 625
Query: 408 APDHTSETSHSPLYADPYTPPAT 430
H T H+ + P PP T
Sbjct: 626 PSHH--GTPHTTINWGPLEPPKT 646
>gi|22027528 PAK-interacting exchange factor beta isoform b [Homo
sapiens]
Length = 782
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 432 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 491
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 492 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 551
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 552 LQKQTKVTSVGNPTIKPHSVP 572
Score = 49.7 bits (117), Expect = 7e-06
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 232 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 288
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 457 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 516
Query: 289 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVM 348
+ E +F I G +I I V C + +D W+ L+ T +V
Sbjct: 517 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT-----------------KVT 559
Query: 349 GSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV-PSTVGCSSQHTPLHRLSLESSPD 407
G ++ P + SH+LP V PS+ S+ PL + + P
Sbjct: 560 SVGNPTIK--------------PHSVPSHTLPSHPVTPSSKHADSKPAPL-TPAYHTLPH 604
Query: 408 APDHTSETSHSPLYADPYTPPAT 430
H T H+ + P PP T
Sbjct: 605 PSHH--GTPHTTINWGPLEPPKT 625
>gi|4505573 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 275 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 334
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 335 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 394
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 395 LQKQTKVTSVGNPTIKPHSVP 415
Score = 49.7 bits (117), Expect = 7e-06
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 232 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 288
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 300 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 359
Query: 289 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVM 348
+ E +F I G +I I V C + +D W+ L+ T +V
Sbjct: 360 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT-----------------KVT 402
Query: 349 GSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV-PSTVGCSSQHTPLHRLSLESSPD 407
G ++ P + SH+LP V PS+ S+ PL + + P
Sbjct: 403 SVGNPTIK--------------PHSVPSHTLPSHPVTPSSKHADSKPAPL-TPAYHTLPH 447
Query: 408 APDHTSETSHSPLYADPYTPPAT 430
H T H+ + P PP T
Sbjct: 448 PSHH--GTPHTTINWGPLEPPKT 468
>gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo
sapiens]
Length = 776
Score = 49.7 bits (117), Expect = 7e-06
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 25/213 (11%)
Query: 232 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 288
G+ + S+V +Q+ +E+ +R L+L+ L + S + G ++G++P+ + L+
Sbjct: 448 GNVIFMSQVMVQYGACEEKEERYLMLFSNVLIMLSASPRMSGFIYQGKIPIAGTVVTRLD 507
Query: 289 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVM 348
E E +F I G + I V C + +D+ WL L + P + S
Sbjct: 508 EIEGNDCTFEITGNTVERIVVHCNNNQDFQEWLEQLNRLIR----GPASCSSLSKTSSSS 563
Query: 349 GSGRGSLSSGGQ-----------TSWDSGCLAP-PSTRTSHSLPESSVPSTVGCSSQHTP 396
S S SS GQ W CL P P R S +L S + S +P
Sbjct: 564 CSAHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAALGYKERMSYILKESSKSP 623
Query: 397 ------LHRLSLESSPDAPDHTSETSHSPLYAD 423
LH+ E P ++ S + L D
Sbjct: 624 KTMKKFLHKRKTERKPSEEEYVIRKSTAALEED 656
Score = 47.4 bits (111), Expect = 4e-05
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE LS + ++NLG V+ ++V +++ ++ + YL LF L +
Sbjct: 423 KRKQLELQILSEPIQAWEGEDIKNLGNVIFMSQVMVQYGACEEKEERYLMLFSNVLIMLS 482
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEG--SREHAFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG +P+ V L+ + F+ITG ++V C + + WL
Sbjct: 483 ASPRMSGFIYQGKIPIAGTVVTRLDEIEGNDCTFEITGNTVERIVVHCNNNQDFQEWLEQ 542
Query: 185 LEKQTALLGGPRRCHS 200
L + L+ GP C S
Sbjct: 543 LNR---LIRGPASCSS 555
>gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 353
Score = 47.8 bits (112), Expect = 3e-05
Identities = 52/180 (28%), Positives = 69/180 (38%), Gaps = 27/180 (15%)
Query: 417 HSPLYADP---YTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPR 473
H P P Y P + R RG S S R P +PL S+P SVP +
Sbjct: 127 HLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPP--APLASMPSSVPKTSIE 184
Query: 474 SCSSGPAGPYLLSKKGALQSRAAQR---HRGSAKDGGPQPPDAPQ----LVSSAREGSPE 526
S S P LS A + + HR A P P + + L S + PE
Sbjct: 185 SLGS----PSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPE 240
Query: 527 PWLPL------TDGRSPRRSRDPGYDHLWDETLSSSHQK----CPQLGGPEASGGLVQWI 576
P PL GRSP R R+PG+ W +++ + + CP PE S W+
Sbjct: 241 PLRPLKHPSHKPHGRSPPRRRNPGWVS-WSDSMQADSETDAIICPMCKAPERSCPHTWWV 299
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 46.2 bits (108), Expect = 8e-05
Identities = 65/236 (27%), Positives = 83/236 (35%), Gaps = 45/236 (19%)
Query: 330 REGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVG 389
R+ P LP + GS+ G+G SW G L+P +R PE ++ + G
Sbjct: 527 RKQQPQLPRPPTTGGSE--GAGAAPCPPNPANSWVPG-LSPGGSRRPPRSPERTLSPSSG 583
Query: 390 CSSQH-TPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAM 448
SSQ TP + P A SP A P P + R S
Sbjct: 584 YSSQSGTPTLPPKGLAGPPA---------SPGKAQPPKPERVTSLRSPGASVSSSLTSLC 634
Query: 449 QSARGPTPSS-----------------PLPSVPV--SVPASDPRSCSSGPAGPYLLSKKG 489
S+ P PS P P VP S P S PRS PA P
Sbjct: 635 SSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPRS--PNPAAP------- 685
Query: 490 ALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGY 545
AL + A S D PQ P PQ + + SP ++ +SP S P Y
Sbjct: 686 ALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESP----VISKDQSPPPSPPPSY 737
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 44.3 bits (103), Expect = 3e-04
Identities = 71/218 (32%), Positives = 83/218 (38%), Gaps = 34/218 (15%)
Query: 332 GAPPLPGAESFPGSQVMG--SGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPST-- 387
G P LP S P S V S SL SG S S +PPS S P S VPS
Sbjct: 127 GVPSLPSDVSSPPSDVPSLLSDVPSLLSG-VPSPPSDVPSPPSDVPS---PPSDVPSLLS 182
Query: 388 -VGCSSQHTPLHRLSLESSP-DAP---DHTSETSHSPLYADPYTPPATSHRRVTDVRGLE 442
V P + S P D P D S S PL +D +PP+ +DV L
Sbjct: 183 GVPSPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPSDVPSLS 242
Query: 443 EFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGS 502
P+P S +PS+ VP S P S P LLS +L S S
Sbjct: 243 GV---------PSPPSDVPSLLSGVP-SPPSDISPPSDVPSLLSDVPSLPSDVP-----S 287
Query: 503 AKDGGPQPP-DAPQLVSSARE-----GSPEPWLPLTDG 534
G P PP D P L+S SP +PL G
Sbjct: 288 LLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSDIPLLSG 325
Score = 32.7 bits (73), Expect = 0.93
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 392 SQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSA 451
S H PL +S S +P ++ + H PL + P+ + HR + + LS +
Sbjct: 66 SPHHPL--MSPHYSLVSPQYSPVSPHCPLVS-PHYSLVSPHRPL-----VSPLLSGV--- 114
Query: 452 RGPTPSSPLPSVPVSVPASDPRSCSSGPAG-PYLLSKKGALQSRAAQRHRG--SAKDGGP 508
P+P S +PS+ VP S P SS P+ P LLS +L S S P
Sbjct: 115 --PSPPSDVPSLLSGVP-SLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSDVP 171
Query: 509 QPP-DAPQLVSSAREGSPEPWLPLTDGRSP 537
PP D P L+S + P +D SP
Sbjct: 172 SPPSDVPSLLSGVPSPPSDVPSPPSDVPSP 201
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 43.9 bits (102), Expect = 4e-04
Identities = 51/187 (27%), Positives = 74/187 (39%), Gaps = 8/187 (4%)
Query: 338 GAESFPGSQVMGSGRGSL-SSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTP 396
G+ S S M S +GS SS + S SG S T H L S + + + +
Sbjct: 1121 GSSSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSS 1180
Query: 397 LHRLSLESSPDAPDHT-----SETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSA 451
L SL +P H+ S+ SP+ P TPP++ + +S S+
Sbjct: 1181 LMNPSLSKPNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSS 1240
Query: 452 RGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPP 511
G SS L S S+ P S +S A S G+ S + +H GS+K P
Sbjct: 1241 SGMKSSSGLGS-SGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQH-GSSKGKSPSRN 1298
Query: 512 DAPQLVS 518
P L +
Sbjct: 1299 KKPSLTA 1305
>gi|157311635 FAM83H [Homo sapiens]
Length = 1179
Score = 42.4 bits (98), Expect = 0.001
Identities = 68/239 (28%), Positives = 99/239 (41%), Gaps = 49/239 (20%)
Query: 329 HREGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTV 388
H+E A PGA S +Q++ + L G S L+ S TS +S +P +
Sbjct: 802 HQE-AERQPGAASLTAAQLLDT----LGRSGSDRLPSRFLSAQSHSTSPQGLDSPLP--L 854
Query: 389 GCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAM 448
S H LH S S A E SP P S RR + G E +
Sbjct: 855 EGSGAHQVLHNESKGSPTSA---YPERKGSPT-------PGFSTRRGSPTTGFIEQKGSP 904
Query: 449 QSA----RG----PTP---SSPLPSVP-------VSVPASDPRS--CSSGPAGPYLLSKK 488
SA RG P P SSP+P VP +++ P++ GP+GP + +K
Sbjct: 905 TSAYPERRGSPVPPVPERRSSPVPPVPERRGSLTLTISGESPKAGPAEEGPSGPMEVLRK 964
Query: 489 GALQSRAAQRHRGSAK---DGG-PQP-----PDAPQLVSSAREGSPEPWLPLTDGRSPR 538
G+L+ R +G + +GG P P P++P+ +S + S E T+ R PR
Sbjct: 965 GSLRLRQLLSPKGERRMEDEGGFPVPQENGQPESPRRLSLGQGDSTE---AATEERGPR 1020
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 42.4 bits (98), Expect = 0.001
Identities = 50/224 (22%), Positives = 82/224 (36%), Gaps = 31/224 (13%)
Query: 331 EGAPPLPGAESFPGS--QVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTV 388
E P +P PG ++ G + + + +S APP+ R SL + ++
Sbjct: 275 EARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASESTTPAPPTPRPRSSLQQENLVEQA 334
Query: 389 GCSSQ-HTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSA 447
G SS + LH L + P SE + +P P+ ++
Sbjct: 335 GSSSLVNGRLHELPVPKPRGTPK-PSEGTPAPRKDPPW-------------------ITL 374
Query: 448 MQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLL-SKKGALQSRAAQRHRGSAKDG 506
+Q+ P+ PS P+ D R +G S +L+S+ +D
Sbjct: 375 VQAEPKKKPAPLPPSSSPGPPSQDSRQVENGGTEEVAQPSPTASLESKPYNPFEEEEEDK 434
Query: 507 GPQPPDAPQLVSSAREGSPE-------PWLPLTDGRSPRRSRDP 543
+ P AP L +S G PE PW +T SP+ + P
Sbjct: 435 EEEAPAAPSLATSPALGHPESTPKSLHPWYGITPTSSPKTKKRP 478
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 8/177 (4%)
Query: 369 APPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPP 428
AP +T+++ + P+ P+T + TP + AP T +P P TP
Sbjct: 248 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP- 306
Query: 429 ATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKK 488
++ E + + TP P P+ P + + P P + K
Sbjct: 307 ----KKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 362
Query: 489 GALQSRAAQRHRGSAKDGGPQPP--DAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
+ + + K+ P P AP SA + EP P T +P ++P
Sbjct: 363 EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP-APTTTKSAPTTPKEP 418
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 8/177 (4%)
Query: 369 APPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPP 428
AP +T+++ + P+ P+T + TP + AP T +P P TP
Sbjct: 289 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP- 347
Query: 429 ATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKK 488
++ E + + TP P P+ P + + P P + K
Sbjct: 348 ----KKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 403
Query: 489 GALQSRAAQRHRGSAKDGGPQPP--DAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
+ + + K+ P P AP SA + EP P T +P ++P
Sbjct: 404 EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP-APTTTKSAPTTPKEP 459
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 8/177 (4%)
Query: 369 APPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPP 428
AP +T+++ + P+ P+T + TP + AP T +P P TP
Sbjct: 341 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP- 399
Query: 429 ATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKK 488
++ E + + TP P P+ P + + P P + K
Sbjct: 400 ----KKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 455
Query: 489 GALQSRAAQRHRGSAKDGGPQPP--DAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
+ + + K+ P P AP SA + EP P T +P ++P
Sbjct: 456 EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP-APTTTKSAPTTPKEP 511
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 8/177 (4%)
Query: 369 APPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPP 428
AP +T+++ + P+ P+T + TP + AP T +P P TP
Sbjct: 382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP- 440
Query: 429 ATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKK 488
++ E + + TP P P+ P + + P P + K
Sbjct: 441 ----KKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 496
Query: 489 GALQSRAAQRHRGSAKDGGPQPP--DAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
+ + + K+ P P AP SA + EP P T +P ++P
Sbjct: 497 EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP-APTTTKSAPTTPKEP 552
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 41.2 bits (95), Expect = 0.003
Identities = 53/217 (24%), Positives = 75/217 (34%), Gaps = 42/217 (19%)
Query: 334 PPLPGAESFPGSQV----MGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVG 389
P LP +E P + M R ++ GQ G L PPST+ S P + +T
Sbjct: 1013 PLLPSSEPPPAPPLDPKFMKDTRPPFTNSGQPESSRGSLRPPSTKEETSRPPMPLITTEA 1072
Query: 390 CSS-QHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAM 448
Q P+ + S + + T++ +P+ + P SA
Sbjct: 1073 LQMVQLRPVRKNSGAEAAQLSERTAQEQRTPVAPQYHLKP-----------------SAF 1115
Query: 449 QSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGP 508
+R T S P SV +S P S G H +A+ GGP
Sbjct: 1116 LKSRNSTNEMESESQPASVTSSLPTPAKSSSQGD----------------HGSAAERGGP 1159
Query: 509 --QPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
+ P AP + SP PL D SP R P
Sbjct: 1160 VSRSPGAPSAGEAEARPSPST-TPLPDS-SPSRKPPP 1194
Score = 34.7 bits (78), Expect = 0.25
Identities = 51/203 (25%), Positives = 74/203 (36%), Gaps = 23/203 (11%)
Query: 334 PPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAP--PSTRTSHSLPESSVPST-VGC 390
P +P +S S V S + S ++ SG + P+ + + P VPS C
Sbjct: 883 PKVPERKSSLISSVSISSSSTSLSSSTSTEGSGTMKKLDPAVGSPPAPPPPPVPSPPFPC 942
Query: 391 SSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQS 450
+ +P P P T + SPL P PP + + LS +
Sbjct: 943 PADRSPF-------LPPPPPVTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRP 995
Query: 451 ARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKD--GGP 508
A P LP PVS+P P SS P L K +R + G + G
Sbjct: 996 ALSPI----LPDSPVSLPLPPPLLPSSEPPPAPPLDPKFMKDTRPPFTNSGQPESSRGSL 1051
Query: 509 QPPDAPQLVSSAREGSPEPWLPL 531
+PP S +E + P +PL
Sbjct: 1052 RPP-------STKEETSRPPMPL 1067
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 41.2 bits (95), Expect = 0.003
Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 35/214 (16%)
Query: 333 APPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLP-ESSVPSTVGCS 391
+PPLP + P + +LS +T L+P S + + P E P +V
Sbjct: 108 SPPLPEHQKIPCNSAEPKSIPALSM--ETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSP 165
Query: 392 SQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSA 451
TPL SP+ S +S P P + P +++ V E A S
Sbjct: 166 ELQTPL------PSPEPSKPASVSSPEP----PKSVPVCESQKLAPVPSPEPQKPAPVSP 215
Query: 452 RG--PTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQ 509
T S+P P P + +S P P L + S + GP
Sbjct: 216 ESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAA---------------SPEPWGPS 260
Query: 510 PPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
P +P+ SAR SPEP P SP S +P
Sbjct: 261 PAASPESRKSARTTSPEPRKP-----SPSESPEP 289
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 41.2 bits (95), Expect = 0.003
Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 375 TSHSLPESSVPSTVGCSSQHT--PLHRLSLES----SPDAPDHTSETSHSPLYADPYTPP 428
+SHS P++S PS VG SS P+H +L S S T+ S SPL+ P +P
Sbjct: 2147 SSHSSPQTSSPS-VGTSSSFVSAPVHSTTLSSGSHSSLSTHPTTASVSASPLF--PSSPA 2203
Query: 429 ATSHRRVT------DVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGP 482
A++ R T L L PTPSS L S ++ P S PR+ +S P
Sbjct: 2204 ASTTIRATLPHTISSPFTLSALLPISTVTVSPTPSSHLASSTIAFP-STPRTTASTHTAP 2262
Query: 483 YLLSKKGALQS 493
S+ +S
Sbjct: 2263 AFSSQSTTSRS 2273
Score = 35.0 bits (79), Expect = 0.19
Identities = 53/208 (25%), Positives = 76/208 (36%), Gaps = 26/208 (12%)
Query: 335 PLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQH 394
P P + P V SG S T+ S L ++ T H PE + ST + H
Sbjct: 1716 PNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTSSTHH--PEVTSTSTTSITPNH 1773
Query: 395 T------PLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAM 448
T P+ + +S P T T+HSP T P +S VT S
Sbjct: 1774 TSTGTRTPVAHTTSATSSRLP--TPFTTHSPPTG---TTPISSTGPVTAT-------SFQ 1821
Query: 449 QSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGP 508
+ PTPS P ++P VP+ + P+ ++ + +A H S G
Sbjct: 1822 TTTTYPTPSHPHTTLPTHVPSFSTSLVT--PSTHTVIIPTHTQMATSASIH--SMPTGTI 1877
Query: 509 QPPDAPQLVSSAREGSPEPWLPLTDGRS 536
PP + S + P P T G S
Sbjct: 1878 PPPTTIKATGSTH--TAPPMTPTTSGTS 1903
Score = 35.0 bits (79), Expect = 0.19
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 362 SWDSGCLAPPST----RTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSH 417
S +G + PP+T ++H+ P + P+T G S +P + ++S P HTS T H
Sbjct: 1871 SMPTGTIPPPTTIKATGSTHTAPPMT-PTTSGTSQ--SPSSFSTAKTSTSLPYHTSSTHH 1927
Query: 418 ---SPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTP----SSPLPSVPVS 466
+P TP TS T R ++ S+R PTP S P S P S
Sbjct: 1928 PEVTPTSTTNITPKHTS----TGTRTPVAHTTSASSSRLPTPFTTHSPPTGSSPFS 1979
Score = 34.7 bits (78), Expect = 0.25
Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 356 SSGGQTSWDSGCLAPP----STRTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDA-PD 410
+S S +G + PP +T ++H+ P + P+T G S H+ S +P +
Sbjct: 1472 TSASNHSAPTGTIPPPTTLKATGSTHTAPPIT-PTTSGTSQAHS---SFSTNKTPTSLHS 1527
Query: 411 HTSETSH---SPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVS 466
HTS T H +P TP TS R T V S+ T S P S P S
Sbjct: 1528 HTSSTHHPEVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFTTHSPPTGSSPFS 1586
>gi|23510413 sorting nexin 26 [Homo sapiens]
Length = 1126
Score = 41.2 bits (95), Expect = 0.003
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 42/182 (23%)
Query: 348 MGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPLHR-----LSL 402
+G+ GS SG SW S+P + ++ G Q PLHR LS
Sbjct: 928 IGASEGSPYSGPTRSWSP----------FRSMPPDRLNASYGMLGQSPPLHRSPDFLLSY 977
Query: 403 ESSPDA--PDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPL 460
+P PDH Y+ P RR T L +++ RGP+P+S
Sbjct: 978 PPAPSCFPPDHLG-----------YSAPQHPARRPTPPEPL--YVNLALGPRGPSPASSS 1024
Query: 461 PSVPVSVPAS--DPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVS 518
S P + P S DP GP P L K+ RA R + GP P P L+
Sbjct: 1025 SSSPPAHPRSRSDP-----GPPVPRLPQKQ-----RAPWGPRTPHRVPGPWGPPEPLLLY 1074
Query: 519 SA 520
A
Sbjct: 1075 RA 1076
Score = 31.6 bits (70), Expect = 2.1
Identities = 56/218 (25%), Positives = 74/218 (33%), Gaps = 14/218 (6%)
Query: 337 PGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPES----SVPSTVGCSS 392
PG S+ +G G S+ W G APP + S S P++ S S SS
Sbjct: 586 PGGSSWKTFFALGRGP-SVPRKKPLPWLGGTRAPP--QPSGSRPDTVTLRSAKSEESLSS 642
Query: 393 QHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPAT--SHRRVTDVRGLE--EFLSAM 448
Q + L +P + T S P + +TD E L
Sbjct: 643 QASGAELLGAGGAPASATPTPALSPGRSLRPHLIPLLLRGAEAPLTDACQQEMCSKLRGA 702
Query: 449 QSARGPTPSSPLPSVPVSV--PASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDG 506
Q GP SPLP P+S+ P P PA L+ Q A Q+ + G
Sbjct: 703 QGPLGPDMESPLPPPPLSLLRPGGAPPPPPKNPARLMALALAERAQQVAEQQSQQEC-GG 761
Query: 507 GPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPG 544
P +P S + E EP G P PG
Sbjct: 762 TPPASQSPFHRSLSLEVGGEPLGTSGSGPPPNSLAHPG 799
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.8 bits (94), Expect = 0.003
Identities = 62/212 (29%), Positives = 72/212 (33%), Gaps = 47/212 (22%)
Query: 325 RAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV 384
R HRE PP P + P V + R S SS PP S P
Sbjct: 274 RPSIHREAVPPPPPQNNKP--PVPSTPRPSASSQAP---------PPPPPPSRPGPPPLP 322
Query: 385 PSTVGCS-SQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEE 443
PS+ G + P LSL SS P S PL PP S R VR
Sbjct: 323 PSSSGNDETPRLPQRNLSLSSS--TPPLPSPGRSGPL------PPPPSERPPPPVRD--- 371
Query: 444 FLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSG-PAGPYLLSKKGALQSRAAQRHRGS 502
P S PLP P P S S S PA P L S+ G R+
Sbjct: 372 ---------PPGRSGPLPPPP---PVSRNGSTSRALPATPQLPSRSGVDSPRS------- 412
Query: 503 AKDGGPQPPDAPQLVSSAREGSPEPWLPLTDG 534
GP+PP P S+ P P + +G
Sbjct: 413 ----GPRPPLPPDRPSAGAPPPPPPSTSIRNG 440
Score = 33.1 bits (74), Expect = 0.71
Identities = 54/231 (23%), Positives = 75/231 (32%), Gaps = 63/231 (27%)
Query: 324 LRAVTHREGAPPLPGAES----------FPGSQVMGSGRGSLSSGGQTSWDSGCLAPPST 373
+++ H G+PP+PG FPG++ G GS+ +S PP
Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP-- 251
Query: 374 RTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR 433
LP TP L + P P + S ++ + PP
Sbjct: 252 -----LPP-------------TPSRALDDKPPPPPPPVGNRPS---IHREAVPPPPP--- 287
Query: 434 RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS 493
Q+ + P PS+P PS P P GP P S G ++
Sbjct: 288 ---------------QNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP-PLPPSSSGNDET 331
Query: 494 -RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
R QR+ + P L S R G P P R P RDP
Sbjct: 332 PRLPQRNLSLSS-------STPPLPSPGRSG---PLPPPPSERPPPPVRDP 372
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.8 bits (94), Expect = 0.003
Identities = 62/212 (29%), Positives = 72/212 (33%), Gaps = 47/212 (22%)
Query: 325 RAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV 384
R HRE PP P + P V + R S SS PP S P
Sbjct: 274 RPSIHREAVPPPPPQNNKP--PVPSTPRPSASSQAP---------PPPPPPSRPGPPPLP 322
Query: 385 PSTVGCS-SQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEE 443
PS+ G + P LSL SS P S PL PP S R VR
Sbjct: 323 PSSSGNDETPRLPQRNLSLSSS--TPPLPSPGRSGPL------PPPPSERPPPPVRD--- 371
Query: 444 FLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSG-PAGPYLLSKKGALQSRAAQRHRGS 502
P S PLP P P S S S PA P L S+ G R+
Sbjct: 372 ---------PPGRSGPLPPPP---PVSRNGSTSRALPATPQLPSRSGVDSPRS------- 412
Query: 503 AKDGGPQPPDAPQLVSSAREGSPEPWLPLTDG 534
GP+PP P S+ P P + +G
Sbjct: 413 ----GPRPPLPPDRPSAGAPPPPPPSTSIRNG 440
Score = 33.1 bits (74), Expect = 0.71
Identities = 54/231 (23%), Positives = 75/231 (32%), Gaps = 63/231 (27%)
Query: 324 LRAVTHREGAPPLPGAES----------FPGSQVMGSGRGSLSSGGQTSWDSGCLAPPST 373
+++ H G+PP+PG FPG++ G GS+ +S PP
Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP-- 251
Query: 374 RTSHSLPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR 433
LP TP L + P P + S ++ + PP
Sbjct: 252 -----LPP-------------TPSRALDDKPPPPPPPVGNRPS---IHREAVPPPPP--- 287
Query: 434 RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS 493
Q+ + P PS+P PS P P GP P S G ++
Sbjct: 288 ---------------QNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP-PLPPSSSGNDET 331
Query: 494 -RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
R QR+ + P L S R G P P R P RDP
Sbjct: 332 PRLPQRNLSLSS-------STPPLPSPGRSG---PLPPPPSERPPPPVRDP 372
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 40.4 bits (93), Expect = 0.004
Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 41/243 (16%)
Query: 318 GHWLLCLRAVTHRE-----GAPPLPGAESFPGSQ--VMGSGRGSLSSGGQTSWDSGCLAP 370
G LL L+A + +E G P L A+ + V S + SSGG LA
Sbjct: 725 GEPLLGLQAASAQEPGCCPGLPHLCSAQGLAPAPCLVTPSWTETASSGGDHPQAEPKLAT 784
Query: 371 PSTRTSHS-LPESSVPSTVGCSSQHTPLHRLSLESSPDAPDHTSETSHSPLYADPYTPPA 429
+ T+ LP SVPS S + PL S+PDAPD A P +P
Sbjct: 785 EAEGTTGPRLPLPSVPSP---SQEGAPLPSEEA-SAPDAPD-----------ALPDSPTP 829
Query: 430 TSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKG 489
+ V+ ++ + SA + SSP V P+S+ + +G + +
Sbjct: 830 ATGGEVSAIK--------LASALNGSSSSP----EVEAPSSEDEDTAEATSGIFTDTSSD 877
Query: 490 ALQSR---AAQRHRGSAKD-GGPQPPDAPQLVSSAREGSPEPWLPLTDGRS--PRRSRDP 543
LQ+R R K G P D+ + SSA +G E + P G S R+ D
Sbjct: 878 GLQARRPDVVPAFRSLQKQVGTPDSLDSLDIPSSASDGGYEVFSPSATGPSGGQPRALDS 937
Query: 544 GYD 546
GYD
Sbjct: 938 GYD 940
Score = 31.2 bits (69), Expect = 2.7
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 456 PSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA--AQRHRGSAKDGGPQPPDA 513
P PL + + A +P C P P+L S +G + +A GG P
Sbjct: 724 PGEPLLGLQAA-SAQEPGCC---PGLPHLCSAQGLAPAPCLVTPSWTETASSGGDHPQAE 779
Query: 514 PQLVSSAREGSPEPWLPLTDGRSPRRSRDP 543
P+L + A EG+ P LPL SP + P
Sbjct: 780 PKLATEA-EGTTGPRLPLPSVPSPSQEGAP 808
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 40.0 bits (92), Expect = 0.006
Identities = 64/233 (27%), Positives = 84/233 (36%), Gaps = 33/233 (14%)
Query: 332 GAPPLPGAESFP---GSQVMGSGRGS-LSSGGQTSWDSGCLAPPSTRTSHSLPESSVP-- 385
GA LPG S P GSQ GRGS +S C PP+ + S V
Sbjct: 972 GAGDLPGPTSAPVPSGSQ--SGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAEKVSRG 1029
Query: 386 ---STVGCSSQHTPLHRLSLESSPDAPDHTSETSH--SPLYADPYTPPATSHRRVTDVRG 440
S C P + P P ++ H P P P R T G
Sbjct: 1030 DQESPDACLPPTVP----EAPAPPQKPLNSQSQKHLAPPPLLSPLLPSIKPTVRKTRQDG 1085
Query: 441 LEEFLSAMQSAR----GPTP------SSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGA 490
+E A S+ P P SS + P + A +P S+ A P ++ K
Sbjct: 1086 SQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHP-STSTAQP--VTPKPT 1142
Query: 491 LQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSP---EPWLPLTDGRSPRRS 540
Q+ ++ +R S K P P AP+L S P EP +T GR R S
Sbjct: 1143 SQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSS 1195
Score = 38.5 bits (88), Expect = 0.017
Identities = 50/197 (25%), Positives = 74/197 (37%), Gaps = 26/197 (13%)
Query: 361 TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPLHRLSLESS-PDAPDHTSETSHSP 419
TS D P++RT+ S S T P ++S + P P TS T+ S
Sbjct: 1295 TSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSRTTRSR 1354
Query: 420 LYAD------------PYTPPATSHRR-VTDVRGLEEFLSAMQSARGPTPSSPLPSVPVS 466
P PP+TS + VT + G TP + +P+ P
Sbjct: 1355 TNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRKNRSSGKTPETLVPTAP-- 1412
Query: 467 VPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQL---VSSAREG 523
+P + + P P S Q+ + +R S K P AP+L S+ +
Sbjct: 1413 --KLEPSTSTDQPVTPEPTS-----QATRGRTNRSSVKTPETVVPTAPELQPSTSTDQPV 1465
Query: 524 SPEPWLPLTDGRSPRRS 540
+PEP T GR+ R S
Sbjct: 1466 TPEPTSQATRGRTDRSS 1482
Score = 33.9 bits (76), Expect = 0.42
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 31/196 (15%)
Query: 351 GRGSLSSGG--QTSWDSGCLAPPSTRTSHSL-PESSVPSTVGCSSQHTPLHRLSLESSPD 407
GR + SSG +T + PST T + PE + +T G +++ + + P
Sbjct: 1394 GRKNRSSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSV--KTPETVVPT 1451
Query: 408 APDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSV 467
AP+ TS P TP TS Q+ RG T S + + V
Sbjct: 1452 APELQPSTSTD----QPVTPEPTS-----------------QATRGRTDRSSVKTPETVV 1490
Query: 468 PASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQL---VSSAREGS 524
P + S+ P ++ + ++ +++R S K P AP+L S+ + +
Sbjct: 1491 PTAPELQASASTDQP--VTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVT 1548
Query: 525 PEPWLPLTDGRSPRRS 540
PEP T GR+ R S
Sbjct: 1549 PEPTSRATRGRTNRSS 1564
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 39.7 bits (91), Expect = 0.008
Identities = 31/78 (39%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 452 RGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA-AQRHRGSAKDGGPQP 510
RGP S L S P PAS PR S P G S G S + A RGS + G +P
Sbjct: 304 RGPEDSWLLLSAPGPTPAS-PRPAS--PCGKRRYSSSGTPSSASPALSRRGSLGEEGSEP 360
Query: 511 PDAPQLVSSAREGSPEPW 528
P P L + GSP P+
Sbjct: 361 PPPPPLPLARDPGSPGPF 378
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 39.7 bits (91), Expect = 0.008
Identities = 31/78 (39%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 452 RGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA-AQRHRGSAKDGGPQP 510
RGP S L S P PAS PR S P G S G S + A RGS + G +P
Sbjct: 241 RGPEDSWLLLSAPGPTPAS-PRPAS--PCGKRRYSSSGTPSSASPALSRRGSLGEEGSEP 297
Query: 511 PDAPQLVSSAREGSPEPW 528
P P L + GSP P+
Sbjct: 298 PPPPPLPLARDPGSPGPF 315
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 39.7 bits (91), Expect = 0.008
Identities = 51/189 (26%), Positives = 67/189 (35%), Gaps = 37/189 (19%)
Query: 332 GAPPLPGAESFPGSQ---VMGSGRGSLSSGGQTSWDSG-CLAPPSTRTSHSLPE--SSVP 385
GA P PG PG ++G G S G G PPS SH +P S+
Sbjct: 8 GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSV--SHPMPTMGSTDF 65
Query: 386 STVGCSSQHTPL------------HRLSLESSPDAPDH-------TSETSHSPLYADPYT 426
G H P+ H S++ + P H + HS Y P+
Sbjct: 66 PQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHP 125
Query: 427 PPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLS 486
P G E +S+ S GPTP PS P ++ DP++ S GP S
Sbjct: 126 SPL----------GAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFS 175
Query: 487 KKGALQSRA 495
Q RA
Sbjct: 176 PVQLHQLRA 184
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 39.7 bits (91), Expect = 0.008
Identities = 51/189 (26%), Positives = 67/189 (35%), Gaps = 37/189 (19%)
Query: 332 GAPPLPGAESFPGSQ---VMGSGRGSLSSGGQTSWDSG-CLAPPSTRTSHSLPE--SSVP 385
GA P PG PG ++G G S G G PPS SH +P S+
Sbjct: 8 GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSV--SHPMPTMGSTDF 65
Query: 386 STVGCSSQHTPL------------HRLSLESSPDAPDH-------TSETSHSPLYADPYT 426
G H P+ H S++ + P H + HS Y P+
Sbjct: 66 PQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHP 125
Query: 427 PPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLS 486
P G E +S+ S GPTP PS P ++ DP++ S GP S
Sbjct: 126 SPL----------GAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFS 175
Query: 487 KKGALQSRA 495
Q RA
Sbjct: 176 PVQLHQLRA 184
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,502,427
Number of Sequences: 37866
Number of extensions: 1626804
Number of successful extensions: 9170
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 469
Number of HSP's that attempted gapping in prelim test: 8260
Number of HSP's gapped (non-prelim): 1349
length of query: 576
length of database: 18,247,518
effective HSP length: 108
effective length of query: 468
effective length of database: 14,157,990
effective search space: 6625939320
effective search space used: 6625939320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.