Guide to the Human Genome
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Name: ARHGEF7 Sequence: fasta or formatted (803aa) NCBI GI: 166064034
Description:

PAK-interacting exchange factor beta isoform c

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [753aa] PAK-interacting exchange factor beta isoform d
alt prot [646aa] PAK-interacting exchange factor beta isoform a
alt prot [782aa] PAK-interacting exchange factor beta isoform b
alt prot [646aa] PAK-interacting exchange factor beta isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         36           2
 C cysteine            2.0         16           2
 D aspartate           4.1         33           3
 E glutamate           7.3         59           2
 F phenylalanine       2.6         21           1
 G glycine             4.9         39           2
 H histidine           2.9         23           2
 I isoleucine          3.6         29           1
 K lysine              6.4         51           2
 L leucine            11.8         95           3
 M methionine          2.2         18           1
 N asparagine          4.5         36           2
 P proline             6.5         52           2
 Q glutamine           4.9         39           2
 R arginine            4.6         37           2
 S serine             11.1         89           2
 T threonine           7.5         60           2
 V valine              4.7         38           2
 W tryptophan          1.2         10           2
 Y tyrosine            2.7         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PAK-interacting exchange factor beta isoform c [Hom... 
ARHGEF7               0.967   PAK-interacting exchange factor beta isoform b [Homo...
ARHGEF7               0.923   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.689   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.689   PAK-interacting exchange factor beta isoform a 
ARHGEF6               0.496   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
ARHGEF4               0.070   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.069   Rho guanine nucleotide exchange factor 4 isoform b [...
SPATA13               0.062   spermatogenesis associated 13 
PLEKHG1               0.058   pleckstrin homology domain containing, family G (wit...
ARHGEF9               0.053   Cdc42 guanine exchange factor 9 
ITSN2                 0.051   intersectin 2 isoform 3 
ITSN2                 0.051   intersectin 2 isoform 1 
ITSN1                 0.049   intersectin 1 isoform ITSN-l 
PREX1                 0.046   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
PREX2                 0.044   DEP domain containing 2 isoform b 
PREX2                 0.044   DEP domain containing 2 isoform a 
FARP1                 0.039   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
PLEKHG2               0.038   common-site lymphoma/leukemia guanine nucleotide ex...
FGD4                  0.034   FYVE, RhoGEF and PH domain containing 4 
FARP2                 0.034   FERM, RhoGEF and pleckstrin domain protein 2 
TRIO                  0.034   triple functional domain (PTPRF interacting) 
KALRN                 0.033   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.033   kalirin, RhoGEF kinase isoform 2 
TIAM1                 0.033   T-cell lymphoma invasion and metastasis 1 
TIAM2                 0.033   T-cell lymphoma invasion and metastasis 2 isoform b ...
TIAM2                 0.033   T-cell lymphoma invasion and metastasis 2 isoform a ...
DNMBP                 0.031   dynamin binding protein 
PLEKHG3               0.030   pleckstrin homology domain containing, family G, mem...
SH3KBP1               0.029   SH3-domain kinase binding protein 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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